Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014940
CDS Infomation

pacid=37468356 polypeptide=PGSC0003DMP400010341 locus=PGSC0003DMG400005830 ID=PGSC0003DMT400014940.v4.03 annot-version=v4.03
Sequence

ATGGACTCCAGATTCCACTATTTGGGGTTTTCTGCAAACCCTTCATTGAATACATCCAAG
AGTCTGGGAGATTCCATCCGAGTTAATGGAGCTGGAGCTGAAGGTGCTGATTGTGCTGAT
ACCACCCTGCAACTTGATTCCGTTGGGTCCTTAATGCCTTTATTCCCTGCCACAAAGGAA
ATAAAACACAATTGGAGCTTGATTCGTGGATCTGTTGATCAGCAAATTGGTTCATCTTTG
TGTCTAAGCTTAGGCCGTTCATCAAGTGCCTCGGAAAGTAAATGGAGTTCAGGCATTGTA
TGTACCTCAATATCTCCAGCGAAAGAAATTGGTGAGTCCTCGATGGACCTGGAGGTGGAC
TTTGGTCTTTATCTTGCCAATGATAAGAAACTAAGGCCAAAAAGTTTGATTAGCTCCGAT
CCAAAAGTACTTGATGAAGGGCCTGCAATTGATCTGGAATTGAGTCTTTCCAGTAGTGCT
GCTGAATCTGATGTTACCAGTTTGCATCTAACCTCCACTTCACCACAAAGTGTCATAAAG
GTGCCACATGGTTTTGGTGGAGCTCTTCAGACTGATGAAGTATCAGCGGTTTCTCATTGG
AAGACCAGTAGCATTTTTCATCCGTTACATGTGCCACAGGACCAAGGGTCTAGTTACTTC
TCGAAACAGGTGACAAAAGAAGTTGAGCCATCTTCAGTCTCTCTTGATCCTTCCTCAAGT
ATAATAACAAATCAAAATAGCTCAGTCACTTGTACTTCTGAAACAAAGAAGCAGCAACGC
GGCAGTGGCATCAAACAATGTCAGTTCAAGGATTGTATTAAAGGAGCAAGAGGTGCTTCC
GGCTTTTGCATTGCCCATGGTGGAGGACGTAGGTGTCAAAAACCAGACTGCCATAAGGGA
GCTGAAGGTCGAACTGCCTTCTGTAAAGCCCATGGTGGTGGTCGGCGGTGTGGATTCCTT
GATTGTACCAAGAGTGCAGAAGGACGCACTGGCTTCTGCATTGCACATGGGGGTGGACGC
CGTTGCAGTTATGAAGACTGCACCCGTGCTGCCAGAGGGAAGTCCGGATTATGCATTAGA
CATGGTGGGGGCAAGAGATGCCAGGAAGAAAACTGCATAAGAAGTGCTGAAGGACTCTCT
GGCTTTTGCATTTCACATGGAGGTGGCCGGCGGTGTCAGTACCCCCAGTGCTCTAAAGGG
GCACAAGGAAGCACCATGTTTTGCAAAGGCCACGGTGGTGGGAAACGTTGCACATTTGAA
GGGTGCAATAGGGGCGCAGAGGGGAGCACACCTTTCTGTAAGGGTCATGGTGGAGGGAAA
AGATGTTCATTTGAAGGAGGTGGGATTTGCCCAAAGAGTGTTCACGGAGGGACTCTCTTC
TGTGTTAGACATGGTGGTGGTAAGAGATGTGCCATACCAGAGTGCTCCAAGAGTGCTAGG
GGCCGGACAGATTATTGTGTGCGTCATGGTGGTGGTAAAAGATGCAAGTTTGTAGACTGT
GGAAAAAGTGCTCAGGGTAGCACTGATTTCTGCAAGGCGCATGGCAGTGGAAAAAGATGT
TCTTGGGGTCAACCTGATTCCGGATTTGGCCAAATGGATAGTCCTTGTAACTCATTTGCA
AAAGGGAAGAGTGGACTTGTTGAATCTCATGTGGAGCAAGACAAACGCGTTCATGGTGGT
GGTGATACTCTAGGGGCTGCGATCTTGGATTCAACACCCCTAAATCCCGGGAAGATGAAG
GAGATCGATATCATGAACACAGGTTGGAAATATTTTGGATTCAATCAAGCAAGTATGCCA
GTAGGTGGAAGCTCATCATCAGTTTCCGAAGGAAGAGTGCACGGAGGAAGTTTGATGGCA
ATGCTGGCAGGTGGTTCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400010341
PEP Infomation

pacid=37468356 transcript=PGSC0003DMT400014940 locus=PGSC0003DMG400005830 ID=PGSC0003DMT400014940.v4.03 annot-version=v4.03
Sequence

MDSRFHYLGFSANPSLNTSKSLGDSIRVNGAGAEGADCADTTLQLDSVGSLMPLFPATKE
IKHNWSLIRGSVDQQIGSSLCLSLGRSSSASESKWSSGIVCTSISPAKEIGESSMDLEVD
FGLYLANDKKLRPKSLISSDPKVLDEGPAIDLELSLSSSAAESDVTSLHLTSTSPQSVIK
VPHGFGGALQTDEVSAVSHWKTSSIFHPLHVPQDQGSSYFSKQVTKEVEPSSVSLDPSSS
IITNQNSSVTCTSETKKQQRGSGIKQCQFKDCIKGARGASGFCIAHGGGRRCQKPDCHKG
AEGRTAFCKAHGGGRRCGFLDCTKSAEGRTGFCIAHGGGRRCSYEDCTRAARGKSGLCIR
HGGGKRCQEENCIRSAEGLSGFCISHGGGRRCQYPQCSKGAQGSTMFCKGHGGGKRCTFE
GCNRGAEGSTPFCKGHGGGKRCSFEGGGICPKSVHGGTLFCVRHGGGKRCAIPECSKSAR
GRTDYCVRHGGGKRCKFVDCGKSAQGSTDFCKAHGSGKRCSWGQPDSGFGQMDSPCNSFA
KGKSGLVESHVEQDKRVHGGGDTLGAAILDSTPLNPGKMKEIDIMNTGWKYFGFNQASMP
VGGSSSSVSEGRVHGGSLMAMLAGGS*

Transcript Sequence

Transcript ID

PGSC0003DMT400014940
Transcript Infomation

pacid=37468356 locus=PGSC0003DMG400005830 ID=PGSC0003DMT400014940.v4.03 annot-version=v4.03
Sequence

ATGGACTCCAGATTCCACTATTTGGGGTTTTCTGCAAACCCTTCATTGAATACATCCAAG
AGTCTGGGAGATTCCATCCGAGTTAATGGAGCTGGAGCTGAAGGTGCTGATTGTGCTGAT
ACCACCCTGCAACTTGATTCCGTTGGGTCCTTAATGCCTTTATTCCCTGCCACAAAGGAA
ATAAAACACAATTGGAGCTTGATTCGTGGATCTGTTGATCAGCAAATTGGTTCATCTTTG
TGTCTAAGCTTAGGCCGTTCATCAAGTGCCTCGGAAAGTAAATGGAGTTCAGGCATTGTA
TGTACCTCAATATCTCCAGCGAAAGAAATTGGTGAGTCCTCGATGGACCTGGAGGTGGAC
TTTGGTCTTTATCTTGCCAATGATAAGAAACTAAGGCCAAAAAGTTTGATTAGCTCCGAT
CCAAAAGTACTTGATGAAGGGCCTGCAATTGATCTGGAATTGAGTCTTTCCAGTAGTGCT
GCTGAATCTGATGTTACCAGTTTGCATCTAACCTCCACTTCACCACAAAGTGTCATAAAG
GTGCCACATGGTTTTGGTGGAGCTCTTCAGACTGATGAAGTATCAGCGGTTTCTCATTGG
AAGACCAGTAGCATTTTTCATCCGTTACATGTGCCACAGGACCAAGGGTCTAGTTACTTC
TCGAAACAGGTGACAAAAGAAGTTGAGCCATCTTCAGTCTCTCTTGATCCTTCCTCAAGT
ATAATAACAAATCAAAATAGCTCAGTCACTTGTACTTCTGAAACAAAGAAGCAGCAACGC
GGCAGTGGCATCAAACAATGTCAGTTCAAGGATTGTATTAAAGGAGCAAGAGGTGCTTCC
GGCTTTTGCATTGCCCATGGTGGAGGACGTAGGTGTCAAAAACCAGACTGCCATAAGGGA
GCTGAAGGTCGAACTGCCTTCTGTAAAGCCCATGGTGGTGGTCGGCGGTGTGGATTCCTT
GATTGTACCAAGAGTGCAGAAGGACGCACTGGCTTCTGCATTGCACATGGGGGTGGACGC
CGTTGCAGTTATGAAGACTGCACCCGTGCTGCCAGAGGGAAGTCCGGATTATGCATTAGA
CATGGTGGGGGCAAGAGATGCCAGGAAGAAAACTGCATAAGAAGTGCTGAAGGACTCTCT
GGCTTTTGCATTTCACATGGAGGTGGCCGGCGGTGTCAGTACCCCCAGTGCTCTAAAGGG
GCACAAGGAAGCACCATGTTTTGCAAAGGCCACGGTGGTGGGAAACGTTGCACATTTGAA
GGGTGCAATAGGGGCGCAGAGGGGAGCACACCTTTCTGTAAGGGTCATGGTGGAGGGAAA
AGATGTTCATTTGAAGGAGGTGGGATTTGCCCAAAGAGTGTTCACGGAGGGACTCTCTTC
TGTGTTAGACATGGTGGTGGTAAGAGATGTGCCATACCAGAGTGCTCCAAGAGTGCTAGG
GGCCGGACAGATTATTGTGTGCGTCATGGTGGTGGTAAAAGATGCAAGTTTGTAGACTGT
GGAAAAAGTGCTCAGGGTAGCACTGATTTCTGCAAGGCGCATGGCAGTGGAAAAAGATGT
TCTTGGGGTCAACCTGATTCCGGATTTGGCCAAATGGATAGTCCTTGTAACTCATTTGCA
AAAGGGAAGAGTGGACTTGTTGAATCTCATGTGGAGCAAGACAAACGCGTTCATGGTGGT
GGTGATACTCTAGGGGCTGCGATCTTGGATTCAACACCCCTAAATCCCGGGAAGATGAAG
GAGATCGATATCATGAACACAGGTTGGAAATATTTTGGATTCAATCAAGCAAGTATGCCA
GTAGGTGGAAGCTCATCATCAGTTTCCGAAGGAAGAGTGCACGGAGGAAGTTTGATGGCA
ATGCTGGCAGGTGGTTCATGA