Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014820
CDS Infomation

pacid=37468497 polypeptide=PGSC0003DMP400010260 locus=PGSC0003DMG400005787 ID=PGSC0003DMT400014820.v4.03 annot-version=v4.03
Sequence

ATGACGAAGCGAAGTTGGAAGGAATCAATGAAGGCATTTGGGAGTCATGTTGATCCTGAA
AAGGAAGAACAGTGGAAATGGATGAAAATAGGTAATTATTCGATTCCAGAACAACCTCGA
CCCTTTGAATGTTATTGGAGGTTGTGGGATAACGCGTTAGAGGCAAAAAGAAGGCAATAT
AAAGCGAATGTTCGAGCACAAATTTACCCCCAATGTGGTGGATTTATGTGGTATACAGAA
TGCCAATTGGTTCGCAAAATTGAGAATAAAGTAAAAAGGATTGCAAAGCTAATCAAGAAA
ATAAACCAAGGTAGTAGAGAAGGAAATTTGAGGAGAAGATCAGAATTGCTTCAACTTGTT
GATGAATTCCACAAACAGTACAAGTCCCTCTATTCGGTGTACGATAATCTCAGAGGGGAA
GTAAGGAAAAAACTTAATGAAGAACATGAGGGAGATTTATCATCTCAATCTTCTTCATCG
TGTTCGAATTCAGAATCATATTTTAGCCCTGAGGAATTGACCGCGAAAAGTAGTTCATCT
TGTACCAATTATGAGCCTCTTGATGAGGATGCTATGTTGAAGGACAAAGTTATAACTTCA
AATATTGAAGTGAAGGGGGGAAGTGTCGAAAGTTATGATATGGAAAACTTTGAGACACCG
ATGTCTTATAGCCGAGGGTCTGAATCAGGGGAATTCTTCAAAGACTTGAGGATTCAAGGT
GAAGAGAAGTTTATAGATGAATCTGAATGGTTCCAAGAGAAAGTAAAAGAAAAAGAAGAC
GAAATCTTGTATCTGACCGATGATTTTGAGCTTCGAGAGAAGGAGAGATTGTCTCAAATG
AAGGGGTTAGAGGATCAAATTGCTAGTATGAAGGTTGAACTAAATAACTTATGTGTTCAA
AAGAGAGAACTTGAAGATCAACTCGGGTGCAAGTCGAATGAACTTAAGCAAATGGAAGAT
AGTAACTCGGGACTGCAATCTCGTGTGTTAGAGCTAGAAGCAACCTTCACAGAAATTGAT
GAAAATCTACTCAACTCAACGTCTAGAATAGATGATCTTATGGCAAAATCACACATTCTT
CAGCATGAAGTGGATCGTTTAAACACTGAAAAGCATGAATTGGAACAAAAGTTGTTGAAT
GAAACCAAGAAAGGATCAGAACAAGTCAAGGACTTGGCAGAAAAAACACATTTTTCAGAA
CTGCAGCACGTAAATGGTCCACTGCAGCAAGATGTGGACCGTGTACGTGTTCAAAGGAAT
GACTTAGAACAAAAGTTGTTACATGAAACCAACAAAGGATCGAAACAAGTTAAGGACTTA
CATTTTTCAGAACTACAGAAATCCGATTTGGAGCTGTCACTCGAAAAGAAGTCTCACGAG
GCATCTGACCGAGTTAAGGATTTAACAGAAAGGACTAATTATCTGCAACATGAGTTGGAA
GCCTTAAGAAACCAGAATTGTGAACTAGAGTTGTCACTCCAAGAAAAAACACAAGAACTA
TCAGAATATCATCTTCAGATAGAAAATCTGAAAGGGGAACTAATGAGCACTACTTCATCC
AAAAAGGGGCTAACAAAAGCAACGGAGGGCTTAAAATCGGAGGTGAACTCACTCATGGAT
GCAAAATGTGACATGGAAGAGAAGATAATGGATATGAATCAAGAAGCTTATCATTCAGAG
TTACAAAAAGAAAAGCTGAATGATAAGATCATGGAATTGGAAACAAAACTATTAGGAAAA
GAAGCAGAGGTGGGAATTCTTCAAAAGAAGCATGAGGCTTACATGAACGATATGTCGGCT
CAAGGTTCAACATTGACAGCGCGAATCAACAATATTCAAAAGCAGCTGCAAACCGCGGAA
ACTGAAAAATCAAGATTTCAGTCTCAGCTTGAGAAGGAAAAACATGAATTTTCCCAAAGC
CTTGTGCAGATGGAACAGGAAAATACCGAATTGACTATCAAGATCGCGGAGCAGGAGAAA
ACTTTACGAGGGATGCAAGATGTTGTAAACAAGTCAAAAGGGGAACATAAGCAAATGCAG
ATCAAGTTAGAGGATTCCAAATTAAATTTCCACAATGCTGAAAGAAAACTAGGAGAAATA
ACGGAGGAACTACGCAAGTCATTTGAAGACAGTTTACGAATCTTGAGCAGAAGGATCCGC
GTGGCAGAACAAATGCATATCGAGAACAAGGAGTGGTACCAAAAAACCAGAAACTCATAC
GAGAAAGAGAACAAAGATCTAAAAGAGAAAAATGCAAGAAATGAAATGGGGTTGAGGGGA
ATTAAGGATATATCGTTGACAGCTAGCGATATGTTAGGTTCACTAGACACTGTGGCACTC
AAGTTTGAGGAATGCACTGCTCATTTCTTGAATCGAATATCAAAGAATTCATGCGAGCTG
CAATTTGTAAAAGATTGGGTGATGAGGAAAAATAAAGCAATGGCACACGTGAAAGATGAC
TTTGATTGCTTACTTGCACAATGTGATGACAAAGAATCTGAGATATTGAAGTACAGAGAG
AAAGTTTGGAAGTCAGAGAACAGAGTTAGGGAACTAGAGAAGATGATCAAGGACAGAGAG
GAATCAGTGTTGTCTCTCAAGGAGGAAAAACGAGAGGCGATTAGGCAATTATGTGTATGG
ATTGATTATCATCGTAGTCGGTCTGATTACTATAAGAGGATCTTGCTAACTGAATTTGGC
CGGAGGAGCGCTCCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400010260
PEP Infomation

pacid=37468497 transcript=PGSC0003DMT400014820 locus=PGSC0003DMG400005787 ID=PGSC0003DMT400014820.v4.03 annot-version=v4.03
Sequence

MTKRSWKESMKAFGSHVDPEKEEQWKWMKIGNYSIPEQPRPFECYWRLWDNALEAKRRQY
KANVRAQIYPQCGGFMWYTECQLVRKIENKVKRIAKLIKKINQGSREGNLRRRSELLQLV
DEFHKQYKSLYSVYDNLRGEVRKKLNEEHEGDLSSQSSSSCSNSESYFSPEELTAKSSSS
CTNYEPLDEDAMLKDKVITSNIEVKGGSVESYDMENFETPMSYSRGSESGEFFKDLRIQG
EEKFIDESEWFQEKVKEKEDEILYLTDDFELREKERLSQMKGLEDQIASMKVELNNLCVQ
KRELEDQLGCKSNELKQMEDSNSGLQSRVLELEATFTEIDENLLNSTSRIDDLMAKSHIL
QHEVDRLNTEKHELEQKLLNETKKGSEQVKDLAEKTHFSELQHVNGPLQQDVDRVRVQRN
DLEQKLLHETNKGSKQVKDLHFSELQKSDLELSLEKKSHEASDRVKDLTERTNYLQHELE
ALRNQNCELELSLQEKTQELSEYHLQIENLKGELMSTTSSKKGLTKATEGLKSEVNSLMD
AKCDMEEKIMDMNQEAYHSELQKEKLNDKIMELETKLLGKEAEVGILQKKHEAYMNDMSA
QGSTLTARINNIQKQLQTAETEKSRFQSQLEKEKHEFSQSLVQMEQENTELTIKIAEQEK
TLRGMQDVVNKSKGEHKQMQIKLEDSKLNFHNAERKLGEITEELRKSFEDSLRILSRRIR
VAEQMHIENKEWYQKTRNSYEKENKDLKEKNARNEMGLRGIKDISLTASDMLGSLDTVAL
KFEECTAHFLNRISKNSCELQFVKDWVMRKNKAMAHVKDDFDCLLAQCDDKESEILKYRE
KVWKSENRVRELEKMIKDREESVLSLKEEKREAIRQLCVWIDYHRSRSDYYKRILLTEFG
RRSAP*

Transcript Sequence

Transcript ID

PGSC0003DMT400014820
Transcript Infomation

pacid=37468497 locus=PGSC0003DMG400005787 ID=PGSC0003DMT400014820.v4.03 annot-version=v4.03
Sequence

ATGACGAAGCGAAGTTGGAAGGAATCAATGAAGGCATTTGGGAGTCATGTTGATCCTGAA
AAGGAAGAACAGTGGAAATGGATGAAAATAGGTAATTATTCGATTCCAGAACAACCTCGA
CCCTTTGAATGTTATTGGAGGTTGTGGGATAACGCGTTAGAGGCAAAAAGAAGGCAATAT
AAAGCGAATGTTCGAGCACAAATTTACCCCCAATGTGGTGGATTTATGTGGTATACAGAA
TGCCAATTGGTTCGCAAAATTGAGAATAAAGTAAAAAGGATTGCAAAGCTAATCAAGAAA
ATAAACCAAGGTAGTAGAGAAGGAAATTTGAGGAGAAGATCAGAATTGCTTCAACTTGTT
GATGAATTCCACAAACAGTACAAGTCCCTCTATTCGGTGTACGATAATCTCAGAGGGGAA
GTAAGGAAAAAACTTAATGAAGAACATGAGGGAGATTTATCATCTCAATCTTCTTCATCG
TGTTCGAATTCAGAATCATATTTTAGCCCTGAGGAATTGACCGCGAAAAGTAGTTCATCT
TGTACCAATTATGAGCCTCTTGATGAGGATGCTATGTTGAAGGACAAAGTTATAACTTCA
AATATTGAAGTGAAGGGGGGAAGTGTCGAAAGTTATGATATGGAAAACTTTGAGACACCG
ATGTCTTATAGCCGAGGGTCTGAATCAGGGGAATTCTTCAAAGACTTGAGGATTCAAGGT
GAAGAGAAGTTTATAGATGAATCTGAATGGTTCCAAGAGAAAGTAAAAGAAAAAGAAGAC
GAAATCTTGTATCTGACCGATGATTTTGAGCTTCGAGAGAAGGAGAGATTGTCTCAAATG
AAGGGGTTAGAGGATCAAATTGCTAGTATGAAGGTTGAACTAAATAACTTATGTGTTCAA
AAGAGAGAACTTGAAGATCAACTCGGGTGCAAGTCGAATGAACTTAAGCAAATGGAAGAT
AGTAACTCGGGACTGCAATCTCGTGTGTTAGAGCTAGAAGCAACCTTCACAGAAATTGAT
GAAAATCTACTCAACTCAACGTCTAGAATAGATGATCTTATGGCAAAATCACACATTCTT
CAGCATGAAGTGGATCGTTTAAACACTGAAAAGCATGAATTGGAACAAAAGTTGTTGAAT
GAAACCAAGAAAGGATCAGAACAAGTCAAGGACTTGGCAGAAAAAACACATTTTTCAGAA
CTGCAGCACGTAAATGGTCCACTGCAGCAAGATGTGGACCGTGTACGTGTTCAAAGGAAT
GACTTAGAACAAAAGTTGTTACATGAAACCAACAAAGGATCGAAACAAGTTAAGGACTTA
CATTTTTCAGAACTACAGAAATCCGATTTGGAGCTGTCACTCGAAAAGAAGTCTCACGAG
GCATCTGACCGAGTTAAGGATTTAACAGAAAGGACTAATTATCTGCAACATGAGTTGGAA
GCCTTAAGAAACCAGAATTGTGAACTAGAGTTGTCACTCCAAGAAAAAACACAAGAACTA
TCAGAATATCATCTTCAGATAGAAAATCTGAAAGGGGAACTAATGAGCACTACTTCATCC
AAAAAGGGGCTAACAAAAGCAACGGAGGGCTTAAAATCGGAGGTGAACTCACTCATGGAT
GCAAAATGTGACATGGAAGAGAAGATAATGGATATGAATCAAGAAGCTTATCATTCAGAG
TTACAAAAAGAAAAGCTGAATGATAAGATCATGGAATTGGAAACAAAACTATTAGGAAAA
GAAGCAGAGGTGGGAATTCTTCAAAAGAAGCATGAGGCTTACATGAACGATATGTCGGCT
CAAGGTTCAACATTGACAGCGCGAATCAACAATATTCAAAAGCAGCTGCAAACCGCGGAA
ACTGAAAAATCAAGATTTCAGTCTCAGCTTGAGAAGGAAAAACATGAATTTTCCCAAAGC
CTTGTGCAGATGGAACAGGAAAATACCGAATTGACTATCAAGATCGCGGAGCAGGAGAAA
ACTTTACGAGGGATGCAAGATGTTGTAAACAAGTCAAAAGGGGAACATAAGCAAATGCAG
ATCAAGTTAGAGGATTCCAAATTAAATTTCCACAATGCTGAAAGAAAACTAGGAGAAATA
ACGGAGGAACTACGCAAGTCATTTGAAGACAGTTTACGAATCTTGAGCAGAAGGATCCGC
GTGGCAGAACAAATGCATATCGAGAACAAGGAGTGGTACCAAAAAACCAGAAACTCATAC
GAGAAAGAGAACAAAGATCTAAAAGAGAAAAATGCAAGAAATGAAATGGGGTTGAGGGGA
ATTAAGGATATATCGTTGACAGCTAGCGATATGTTAGGTTCACTAGACACTGTGGCACTC
AAGTTTGAGGAATGCACTGCTCATTTCTTGAATCGAATATCAAAGAATTCATGCGAGCTG
CAATTTGTAAAAGATTGGGTGATGAGGAAAAATAAAGCAATGGCACACGTGAAAGATGAC
TTTGATTGCTTACTTGCACAATGTGATGACAAAGAATCTGAGATATTGAAGTACAGAGAG
AAAGTTTGGAAGTCAGAGAACAGAGTTAGGGAACTAGAGAAGATGATCAAGGACAGAGAG
GAATCAGTGTTGTCTCTCAAGGAGGAAAAACGAGAGGCGATTAGGCAATTATGTGTATGG
ATTGATTATCATCGTAGTCGGTCTGATTACTATAAGAGGATCTTGCTAACTGAATTTGGC
CGGAGGAGCGCTCCCTAG