Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014819
CDS Infomation

pacid=37471021 polypeptide=PGSC0003DMP400010259 locus=PGSC0003DMG400005786 ID=PGSC0003DMT400014819.v4.03 annot-version=v4.03
Sequence

ATGGCATTGGTTGTTATCTGTGGTCAGCCATGTAGCGGGAAATCAACCGCTGCAGCTTGT
TTATCTGAAGCACTTAGACAAACGGAACCAGAACCATCTGTTAGAACTATAGATGAAACT
TCATTTCATCTTAGTCGCAACCAAAGCTATGCGAACATGACCGAGGAAAAGAATTTAAGA
GGCGTATTGAGGTCAGAAGTTGACAGATCTTTGTCGAAGGACAGTATAGTCATAGTAGAT
TCTCTTAATAGCATCAAGGGCTATAGATATGAGTTATGGTGTTTGGCTAGAGCAGCAGGG
ATTAGATATTGTGTTGTCCATTGTGACGTTGATGAGCAATCTTCTAGAACATGGAACGTC
GAACGTCGTGAGAGAGGAGAACCATCTTATGATGATAATATATTTGAAGATCTTGTAAGA
AGGTTTGAAAGGCCAGATAGCAAAAATAGATGGGATTCTCCATTGTTCGAGTTATGGCCA
GCTAAAGAAGGAATTGATAAATCATCTACAGCTATAGTTGATGCTGTTACCTATCTTACG
AAAAAAGTAGACTCGAAAACGAGAGATGTTAAGATCCTACAGCCGACCATCGCCACACAG
AGTGCACGTGGTTCTGAGGCAAATTCTTTATATGAGATGGACAGGGCGACACAAGAAATT
ACAAATGCTATTGTGGAAGCTCAGTCCCGCGCTCTTGGGGGTCCTCTCAATGGTGTGTCT
CTTGGTCCAGGAATACCAACTATAGATATTTCGAGATCTGTCAGCCTGCCAGAGCTGCGT
AGGCTACGACGAACTTTCATCAAACTTGCTGGACAGACAAGCTTGAGCGGGCCACCTCCT
CCTTCAGATGCTGATAGTGCAAAAAGGATGTTTGTTGATTACTTAAACAGAGAACTAGGA
AGTGGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400010259
PEP Infomation

pacid=37471021 transcript=PGSC0003DMT400014819 locus=PGSC0003DMG400005786 ID=PGSC0003DMT400014819.v4.03 annot-version=v4.03
Sequence

MALVVICGQPCSGKSTAAACLSEALRQTEPEPSVRTIDETSFHLSRNQSYANMTEEKNLR
GVLRSEVDRSLSKDSIVIVDSLNSIKGYRYELWCLARAAGIRYCVVHCDVDEQSSRTWNV
ERRERGEPSYDDNIFEDLVRRFERPDSKNRWDSPLFELWPAKEGIDKSSTAIVDAVTYLT
KKVDSKTRDVKILQPTIATQSARGSEANSLYEMDRATQEITNAIVEAQSRALGGPLNGVS
LGPGIPTIDISRSVSLPELRRLRRTFIKLAGQTSLSGPPPPSDADSAKRMFVDYLNRELG
SG*

Transcript Sequence

Transcript ID

PGSC0003DMT400014819
Transcript Infomation

pacid=37471021 locus=PGSC0003DMG400005786 ID=PGSC0003DMT400014819.v4.03 annot-version=v4.03
Sequence

ATGGCATTGGTTGTTATCTGTGGTCAGCCATGTAGCGGGAAATCAACCGCTGCAGCTTGT
TTATCTGAAGCACTTAGACAAACGGAACCAGAACCATCTGTTAGAACTATAGATGAAACT
TCATTTCATCTTAGTCGCAACCAAAGCTATGCGAACATGACCGAGGAAAAGAATTTAAGA
GGCGTATTGAGGTCAGAAGTTGACAGATCTTTGTCGAAGGACAGTATAGTCATAGTAGAT
TCTCTTAATAGCATCAAGGGCTATAGATATGAGTTATGGTGTTTGGCTAGAGCAGCAGGG
ATTAGATATTGTGTTGTCCATTGTGACGTTGATGAGCAATCTTCTAGAACATGGAACGTC
GAACGTCGTGAGAGAGGAGAACCATCTTATGATGATAATATATTTGAAGATCTTGTAAGA
AGGTTTGAAAGGCCAGATAGCAAAAATAGATGGGATTCTCCATTGTTCGAGTTATGGCCA
GCTAAAGAAGGAATTGATAAATCATCTACAGCTATAGTTGATGCTGTTACCTATCTTACG
AAAAAAGTAGACTCGAAAACGAGAGATGTTAAGATCCTACAGCCGACCATCGCCACACAG
AGTGCACGTGGTTCTGAGGCAAATTCTTTATATGAGATGGACAGGGCGACACAAGAAATT
ACAAATGCTATTGTGGAAGCTCAGTCCCGCGCTCTTGGGGGTCCTCTCAATGGTGTGTCT
CTTGGTCCAGGAATACCAACTATAGATATTTCGAGATCTGTCAGCCTGCCAGAGCTGCGT
AGGCTACGACGAACTTTCATCAAACTTGCTGGACAGACAAGCTTGAGCGGGCCACCTCCT
CCTTCAGATGCTGATAGTGCAAAAAGGATGTTTGTTGATTACTTAAACAGAGAACTAGGA
AGTGGTTGA