Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014817
CDS Infomation

pacid=37470012 polypeptide=PGSC0003DMP400010257 locus=PGSC0003DMG400005785 ID=PGSC0003DMT400014817.v4.03 annot-version=v4.03
Sequence

ATGGATCAATTTAGGCAAATTGGTGAAGTAGTTGGGAGTTTGAAGGCTCTTATGGTGTTG
AAAAATGATATCCAAATCAATCAAAGGCAATGTTGTTTTCTATTTGATATGTTTGTTCAT
TCTTTTGATACAATTTCTGAAGAAATCAAACATAATTTAAGGTTAAATGAGAGTAATATA
AAGTGGAAAGCTCTTGAGCTGCCTATGAAAGAGCTTCATAGGATCTTTAAAGAAGGCGAA
TCCTACGTAAAATATTGTTTGGATGTTAAAGATTTGTGGGGGAAAGCCATAAGTCTCCAT
ATGAACAGAGATTGTGTTGAGTTTCATATTCATAACTTGCTGTGTTGCTTCCCTGTTGTT
ATTGAAGCTATTGAGGCTGCTGCAGAAATCTCGGGGTTCGATGAGGAGGAAATGCATCAG
AGGAGAACCGCGTTAATGAGGAAATACGACAGGGAATTGATTGATCCGAGGTTTTTCCAG
TGGATGTCTGGGAAGCAGTATTTGGTAACTCGCGAAATATGTAGCCGGTTGGAGTGTTGT
TGGAAAGAGGATAGATGGTTGCTTATCGATGTGATAAGGCAAAAGAAAACAGAAACTTTG
TTGAAGTATGAACAAAGGCTTGGAGACTTATTGTTAAGGAAATTAGATGGTGTTGAACCA
ATTAACAAGATATTGTTGCCTAGTTCAATCTTAGTCGGATCAAACGATTATCATGTAAAG
AGACGTTTAGGGTCGTGGGGCGGACATGTTAAGGAGATACAGTGGTTAGGAGAGAGTTTT
GCTCTGAGGAACTTTTTCGGAGAGGTTGAACCGTTACATGATGAGATTTCTTTGGTGTTT
TCTTTATCCCATTCCAACATTCTGCAATATCACTGTGGTTTTTATGATGAAGAGAGGAAA
GAAGGGTACCTTGTTATGGAGCTGATGAATGATACTCTTGCGACATACATAAAAGATCAT
TCTGGTCAGAGGAAGAGACCGCCTTTTTCAACGTCTGCTGCAGTTGATATTATGCTTCAG
ATTGCAAAAGGGATGGAGTATCTACATTCGAGAAAGATTTATCACGGAGAATTGAACCCG
TCTCATGTACTTCTTAGAGCAAGGAATTCCTCAGCAGAGAGCTATTTTCACGCGAAACTC
AAAGGCTTCGGCTTAACTTCAATCAAAAGTACTTATAAGACTGCCAGCCACAATGCAGCT
GATTCCGTTATATGGTTTGCCCCGGAAGTTCTTGCTGAACAAGAAAAACCAGGAAGCAAG
TGTGCCTACAAGTACACAGAGAAAGCTGATGTCTATAGCTTCGGAATGATTTGTTTCCAA
ATTTTGACAGGGAAAGTTCCGTTTGACGAAGGACATTTGCAAGGGGAGAAAGTCGTGCGG
AATATCAGAGCAGGGGAGAGGCCTCTCTTCCCATATCCTTCACCTAAATACCTTGTGAAC
TTAACAAGAAGATGTTGGCATGCCAATCCAAATCTTCGTCCACGTTTCTCGTCTCTATGC
AGGATTTTACGTTACATCAAGAAGGTCCTTGTCATAAATCCAGAACATGGCCAGCCTGAA
ACTGCCCCTCCACTTGTAGACTACTGTGATATTGAGGCTAGCTACTCGAAGAAGTTTGCT
GAAGAGGAGAGCACGAGTTTGACCCCGGTATCACAGATTCCTTTTCAAATGTTTGCTTAC
CGGCTCATTGAGAAAGAGAAGATTTTTGGAAAGAACTGGGATCCATCAAATGATGGTTTT
TCAGTCCATAGGAGAGCATCATTGCTGAGTGATGACGGGCAATTGTCTGCGATGGATGAT
CTCTTTCTTGCACCGAGTGATGGAAGGTCAGTTTGCTCTGAGATAATTGACAGGAAAGAT
TCAAGATTGTTTGATCAGAGGTCAGCTATCTCCGAGATACCACATAGAAGGCTTCTCTTA
TTCGATCAAACATCAGTTGGTTCTGAGAGTCCGGAGAGGAGATTCTCGTCTGTGGCAACA
GCAGATGAAACACTTTTCTTTGCTGATAGTCCGGACAGGAAAGGAGCAGTATCATCACCA
ATAGTTAATAGGTCACCACGCATTGACACACTAGAGAAAAAGATCATTTCATCGATTAGC
AAGAACCAAAGACTCAAATTTTTAGCCAACCAAGAGAAGGCAATGTCTCCAAAAGCAGCT
GATGAAAAACCTTCATCAAGCATAGCTACTGCACAAAATTTAGCATCTCCACCGACTTCA
GAGGAGATGAAACCAGCTGAACAAAATTTAGTATCTCCACGGACTACAGAGACGAAGAAA
TCAGCTGAGCCAAATTTAGTATCTCCACGGACTACAGAGACGAAGAAATCAGCTGAGCCA
AATTTAGTATCTCCACGGACTACAGAGACGAAGAAATCAGCTGAGCCAAATTTAGTATCT
CCACGGACTACAGAGACGAAGAAATCAGCTGAGCCAAATTTAGTATCTCCACGGACTACA
GAGACGAAGAAATCAGCTGAGCCAAATTTAGTATCTCCACGGACTACAGAGACGAAGAAA
TCAGCTGAGCCAAATTTAGTATCTCCACGGACTACAGAGACGAAGAAATCAGCTGAGCCA
AATTTAGTATCTCCACGGACTACAGAGACGAAGAAATCAGCTGAGCCAAATTTAGTATCT
CCACGGACTACAGAGACGAAGAAATCAGCTGAGCCAAATTTAGTATCTCCACGGACTACA
GAGACGAAGAAATCAGCTGAGCCAAATTTAGTATCTCCACGGACTACAGAGACGAAGAAA
TCAGCTGAGCCAAATTTAGTATCTCCACGGACTACAGAGACGAAGAAATCAGCTGAGCCA
AATTTAGTATCTCCACGGACTACAGAGACGAAGAAATCAGCTGAGCAAAATGTGGTATCT
CCTCCGATTTCAGAGAAGAAAAATTTATCTTATGATCAGAAACCGACTAGTTCTGAGACT
CAAGAAAAGAAAAATGAATCAGTTGATCAGAAACTAATCAGTTCAGAGGCTCATGAGAAG
AAACATTCATCTGATGATCAGAAATTACGACGTTCAAAGACTTTAGATCGGAAAAAGTCA
TTAGCTGCCAATGACAAACCACTTCATGGCGAGGAGATGCAAAGGAAAAGTTTGAGAACC
AGGAGAATAAACCAAAAGTTATTCAACATTGTAGATAAGAAAGTTCCTGATTCTAATCAA
ATTTCAATGTCATCCGAGAATCACGAGAAAACTGCATCCAAGTCCATCAACCAAAAGACA
GCAGTCAAGAAAGATTCATCGCGTAACAAAGTGCAGGACACAAAGACTAGCACTATACCA
GAGAAACTGATCGACGACTCACCAAGATCTTCACCAGCTAGAGTTAATAGAATACATTCA
TCGCCAATGTCTTCTCCAACACGATCCCCAAAGACATATTCAAGATCACCAGCAATCGTC
TCAAAGGGATACGAATATCAATCCCCAAGTTCATCACCATTAAATCCATGTTCGCGATGT
TCACGAGTAAACCGAGAGTGCCAAACTTCAGGTATGAGCCCACATATACAGAGGAAAGCT
CATACCTCTCATTCAGAGATAGCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400010257
PEP Infomation

pacid=37470012 transcript=PGSC0003DMT400014817 locus=PGSC0003DMG400005785 ID=PGSC0003DMT400014817.v4.03 annot-version=v4.03
Sequence

MDQFRQIGEVVGSLKALMVLKNDIQINQRQCCFLFDMFVHSFDTISEEIKHNLRLNESNI
KWKALELPMKELHRIFKEGESYVKYCLDVKDLWGKAISLHMNRDCVEFHIHNLLCCFPVV
IEAIEAAAEISGFDEEEMHQRRTALMRKYDRELIDPRFFQWMSGKQYLVTREICSRLECC
WKEDRWLLIDVIRQKKTETLLKYEQRLGDLLLRKLDGVEPINKILLPSSILVGSNDYHVK
RRLGSWGGHVKEIQWLGESFALRNFFGEVEPLHDEISLVFSLSHSNILQYHCGFYDEERK
EGYLVMELMNDTLATYIKDHSGQRKRPPFSTSAAVDIMLQIAKGMEYLHSRKIYHGELNP
SHVLLRARNSSAESYFHAKLKGFGLTSIKSTYKTASHNAADSVIWFAPEVLAEQEKPGSK
CAYKYTEKADVYSFGMICFQILTGKVPFDEGHLQGEKVVRNIRAGERPLFPYPSPKYLVN
LTRRCWHANPNLRPRFSSLCRILRYIKKVLVINPEHGQPETAPPLVDYCDIEASYSKKFA
EEESTSLTPVSQIPFQMFAYRLIEKEKIFGKNWDPSNDGFSVHRRASLLSDDGQLSAMDD
LFLAPSDGRSVCSEIIDRKDSRLFDQRSAISEIPHRRLLLFDQTSVGSESPERRFSSVAT
ADETLFFADSPDRKGAVSSPIVNRSPRIDTLEKKIISSISKNQRLKFLANQEKAMSPKAA
DEKPSSSIATAQNLASPPTSEEMKPAEQNLVSPRTTETKKSAEPNLVSPRTTETKKSAEP
NLVSPRTTETKKSAEPNLVSPRTTETKKSAEPNLVSPRTTETKKSAEPNLVSPRTTETKK
SAEPNLVSPRTTETKKSAEPNLVSPRTTETKKSAEPNLVSPRTTETKKSAEPNLVSPRTT
ETKKSAEPNLVSPRTTETKKSAEPNLVSPRTTETKKSAEPNLVSPRTTETKKSAEQNVVS
PPISEKKNLSYDQKPTSSETQEKKNESVDQKLISSEAHEKKHSSDDQKLRRSKTLDRKKS
LAANDKPLHGEEMQRKSLRTRRINQKLFNIVDKKVPDSNQISMSSENHEKTASKSINQKT
AVKKDSSRNKVQDTKTSTIPEKLIDDSPRSSPARVNRIHSSPMSSPTRSPKTYSRSPAIV
SKGYEYQSPSSSPLNPCSRCSRVNRECQTSGMSPHIQRKAHTSHSEIA*

Transcript Sequence

Transcript ID

PGSC0003DMT400014817
Transcript Infomation

pacid=37470012 locus=PGSC0003DMG400005785 ID=PGSC0003DMT400014817.v4.03 annot-version=v4.03
Sequence

ATGGATCAATTTAGGCAAATTGGTGAAGTAGTTGGGAGTTTGAAGGCTCTTATGGTGTTG
AAAAATGATATCCAAATCAATCAAAGGCAATGTTGTTTTCTATTTGATATGTTTGTTCAT
TCTTTTGATACAATTTCTGAAGAAATCAAACATAATTTAAGGTTAAATGAGAGTAATATA
AAGTGGAAAGCTCTTGAGCTGCCTATGAAAGAGCTTCATAGGATCTTTAAAGAAGGCGAA
TCCTACGTAAAATATTGTTTGGATGTTAAAGATTTGTGGGGGAAAGCCATAAGTCTCCAT
ATGAACAGAGATTGTGTTGAGTTTCATATTCATAACTTGCTGTGTTGCTTCCCTGTTGTT
ATTGAAGCTATTGAGGCTGCTGCAGAAATCTCGGGGTTCGATGAGGAGGAAATGCATCAG
AGGAGAACCGCGTTAATGAGGAAATACGACAGGGAATTGATTGATCCGAGGTTTTTCCAG
TGGATGTCTGGGAAGCAGTATTTGGTAACTCGCGAAATATGTAGCCGGTTGGAGTGTTGT
TGGAAAGAGGATAGATGGTTGCTTATCGATGTGATAAGGCAAAAGAAAACAGAAACTTTG
TTGAAGTATGAACAAAGGCTTGGAGACTTATTGTTAAGGAAATTAGATGGTGTTGAACCA
ATTAACAAGATATTGTTGCCTAGTTCAATCTTAGTCGGATCAAACGATTATCATGTAAAG
AGACGTTTAGGGTCGTGGGGCGGACATGTTAAGGAGATACAGTGGTTAGGAGAGAGTTTT
GCTCTGAGGAACTTTTTCGGAGAGGTTGAACCGTTACATGATGAGATTTCTTTGGTGTTT
TCTTTATCCCATTCCAACATTCTGCAATATCACTGTGGTTTTTATGATGAAGAGAGGAAA
GAAGGGTACCTTGTTATGGAGCTGATGAATGATACTCTTGCGACATACATAAAAGATCAT
TCTGGTCAGAGGAAGAGACCGCCTTTTTCAACGTCTGCTGCAGTTGATATTATGCTTCAG
ATTGCAAAAGGGATGGAGTATCTACATTCGAGAAAGATTTATCACGGAGAATTGAACCCG
TCTCATGTACTTCTTAGAGCAAGGAATTCCTCAGCAGAGAGCTATTTTCACGCGAAACTC
AAAGGCTTCGGCTTAACTTCAATCAAAAGTACTTATAAGACTGCCAGCCACAATGCAGCT
GATTCCGTTATATGGTTTGCCCCGGAAGTTCTTGCTGAACAAGAAAAACCAGGAAGCAAG
TGTGCCTACAAGTACACAGAGAAAGCTGATGTCTATAGCTTCGGAATGATTTGTTTCCAA
ATTTTGACAGGGAAAGTTCCGTTTGACGAAGGACATTTGCAAGGGGAGAAAGTCGTGCGG
AATATCAGAGCAGGGGAGAGGCCTCTCTTCCCATATCCTTCACCTAAATACCTTGTGAAC
TTAACAAGAAGATGTTGGCATGCCAATCCAAATCTTCGTCCACGTTTCTCGTCTCTATGC
AGGATTTTACGTTACATCAAGAAGGTCCTTGTCATAAATCCAGAACATGGCCAGCCTGAA
ACTGCCCCTCCACTTGTAGACTACTGTGATATTGAGGCTAGCTACTCGAAGAAGTTTGCT
GAAGAGGAGAGCACGAGTTTGACCCCGGTATCACAGATTCCTTTTCAAATGTTTGCTTAC
CGGCTCATTGAGAAAGAGAAGATTTTTGGAAAGAACTGGGATCCATCAAATGATGGTTTT
TCAGTCCATAGGAGAGCATCATTGCTGAGTGATGACGGGCAATTGTCTGCGATGGATGAT
CTCTTTCTTGCACCGAGTGATGGAAGGTCAGTTTGCTCTGAGATAATTGACAGGAAAGAT
TCAAGATTGTTTGATCAGAGGTCAGCTATCTCCGAGATACCACATAGAAGGCTTCTCTTA
TTCGATCAAACATCAGTTGGTTCTGAGAGTCCGGAGAGGAGATTCTCGTCTGTGGCAACA
GCAGATGAAACACTTTTCTTTGCTGATAGTCCGGACAGGAAAGGAGCAGTATCATCACCA
ATAGTTAATAGGTCACCACGCATTGACACACTAGAGAAAAAGATCATTTCATCGATTAGC
AAGAACCAAAGACTCAAATTTTTAGCCAACCAAGAGAAGGCAATGTCTCCAAAAGCAGCT
GATGAAAAACCTTCATCAAGCATAGCTACTGCACAAAATTTAGCATCTCCACCGACTTCA
GAGGAGATGAAACCAGCTGAACAAAATTTAGTATCTCCACGGACTACAGAGACGAAGAAA
TCAGCTGAGCCAAATTTAGTATCTCCACGGACTACAGAGACGAAGAAATCAGCTGAGCCA
AATTTAGTATCTCCACGGACTACAGAGACGAAGAAATCAGCTGAGCCAAATTTAGTATCT
CCACGGACTACAGAGACGAAGAAATCAGCTGAGCCAAATTTAGTATCTCCACGGACTACA
GAGACGAAGAAATCAGCTGAGCCAAATTTAGTATCTCCACGGACTACAGAGACGAAGAAA
TCAGCTGAGCCAAATTTAGTATCTCCACGGACTACAGAGACGAAGAAATCAGCTGAGCCA
AATTTAGTATCTCCACGGACTACAGAGACGAAGAAATCAGCTGAGCCAAATTTAGTATCT
CCACGGACTACAGAGACGAAGAAATCAGCTGAGCCAAATTTAGTATCTCCACGGACTACA
GAGACGAAGAAATCAGCTGAGCCAAATTTAGTATCTCCACGGACTACAGAGACGAAGAAA
TCAGCTGAGCCAAATTTAGTATCTCCACGGACTACAGAGACGAAGAAATCAGCTGAGCCA
AATTTAGTATCTCCACGGACTACAGAGACGAAGAAATCAGCTGAGCAAAATGTGGTATCT
CCTCCGATTTCAGAGAAGAAAAATTTATCTTATGATCAGAAACCGACTAGTTCTGAGACT
CAAGAAAAGAAAAATGAATCAGTTGATCAGAAACTAATCAGTTCAGAGGCTCATGAGAAG
AAACATTCATCTGATGATCAGAAATTACGACGTTCAAAGACTTTAGATCGGAAAAAGTCA
TTAGCTGCCAATGACAAACCACTTCATGGCGAGGAGATGCAAAGGAAAAGTTTGAGAACC
AGGAGAATAAACCAAAAGTTATTCAACATTGTAGATAAGAAAGTTCCTGATTCTAATCAA
ATTTCAATGTCATCCGAGAATCACGAGAAAACTGCATCCAAGTCCATCAACCAAAAGACA
GCAGTCAAGAAAGATTCATCGCGTAACAAAGTGCAGGACACAAAGACTAGCACTATACCA
GAGAAACTGATCGACGACTCACCAAGATCTTCACCAGCTAGAGTTAATAGAATACATTCA
TCGCCAATGTCTTCTCCAACACGATCCCCAAAGACATATTCAAGATCACCAGCAATCGTC
TCAAAGGGATACGAATATCAATCCCCAAGTTCATCACCATTAAATCCATGTTCGCGATGT
TCACGAGTAAACCGAGAGTGCCAAACTTCAGGTATGAGCCCACATATACAGAGGAAAGCT
CATACCTCTCATTCAGAGATAGCTTAG