Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014794
CDS Infomation

pacid=37469102 polypeptide=PGSC0003DMP400010240 locus=PGSC0003DMG400005773 ID=PGSC0003DMT400014794.v4.03 annot-version=v4.03
Sequence

ATGTACGGTGGAGCCGGCGACGATGAGACAAACCCAGGTTTGGTTAAACGATTTTACTCA
CTTGAATCGAGTCATAGGAAGCTTCAAGAACAGTTAAATGTTTTATTGCAAGAAAAAAAG
ATTGATGATTCATTGAAAATGGATGATTCAGATGAGAAATTAATGGATTCGGGTGAAATG
GGGTTTCATGTTCCTGGGGTTTTTTCTACTGGAAGTCCGTACAGGAATGTGTTGAATTAT
ATGGGTCATGCTGTTCATGTAAGTAGAGCTAGTACAGGGGAGATAATTTACTGGAATCGA
TCTGCTGAAAGACTTTATGGTTATAAAGAGCATGAAGTACTTGGACAGATGACCACTGAG
TTCCTTATATGTGAAGAATATCATCAACTGGTAAGGATTGCCAGGGAAAGATTGCGCTGT
GGACAATCATGGTCCGGTCTGTTTCCTTGTAAGAAGAGGTATGGTCAGATATTTATGGCA
ATGTTGACGAAGAGCCCATTGTACGAGAATGGCGAGCTTTTTGGTATTATCACTGTTTCA
AATGACGCAGCTTCATTCATTAATACAAACTCAAACGACACAAGTTCCCATGAGGACAAT
GGTGAACCTGGTGCTCGAGGAATAGATTTCAAAAGGATTCAATGGAATCAACGACCACAA
ATTGCATCATCTGTTTCAAATCTGGCCTCGAAAGTTTTCTCACTGAAGCGTGGAGAAGAT
GCATCTGCAGAAGTGAGCACTAAGGATGAGGCTGATTTAGACACCAAAGAAGGAAAACCA
CTGAAGCCACCCAGAGCACCAGCGACACGGCTGAGTTTCAGTTTGCTTGGTGGAAAGAAT
AGAGCTAACACAGAGAGCTCTGAGAAGGATGAATCTACATTTGACATCGCTCAGCCTTCC
AAATTTGCGGCAAAGATTATGTCAAAGCTGAATATTGCAGGATTTGGGCACATTAGTAAA
GAGAAGGGTCAACAGAACGGGGATGATGATACTCCTGTTGGTGAGAATGTAGCTGAACCA
CATTCACCAACGGCATCCGATTCTACTGGAAAATATTGTCACTTAGTTGATGCACATCAT
CACCTCCAGAAAAACCAGAAAGGAAATCCAGGAAGAACGTGTGCCACAACTGGGCATGAC
GGTCCTGGAGGGTCCTCCTCAAGGAACTCCGATAAATTTCCCGAGACACTTGAAATTCCT
GAACAGATTCCAGGATCATGTATGAGTGATGAACTCCAGCAATCGCCTAAGTCAGGTGGG
AGCACAGATAGCCATGGAAGTTCACCATTCAAGGTTGAGAATGAGTCGAGTTTGATAGTA
GATTGTGCAATTCTATGGGAAGACATTAGCCTAAAGGAGGAAATTGGACGAGGTTCATAT
GGTGTTGTGTATCGTGGAATCTGGAATGCATCGGATGTTGCTGTTAAGGTTTACTTTGGG
AATCAATGCAGTGAGGAAACATTGCTTGACTACAAAAAGGAGGTTGAAATAATGAAAAGA
CTCAGACATCCTAACGTGTTGCTATTCATGGGGGCCGTATATTCTCAAGATAAATCGGCC
ATCGTCACAGAGTTCTTACCTAGGGGAAGTCTTTTCAAAACACTTCATGGAAATAATCAT
CTATTAGACTTCAGACGGCGTCTTAGGATGGCCCTCGATGTGGCAAGAGGTATGAATTAT
TTGCATCGCTGGAACCCACCTATTGTACATAGAGACCTTAAATCATCAAACCTGCTTGTT
GATAAAAGTTGGACCGTCAAGGTTGGAGATTTTGGCCTATCAAGATTTAAAGATTCAACC
TTTTTAACAACAAAATCTGGTCGAGGGACGCCCCAGTGGATGGCTCCTGAAGTACTTCGA
GATGAACCTTCAACAGAAAAATCCGACGTCTTCAGTTTTGGCGTGATCTTATGGGAATTA
ATGACTGAATCTATTCCATGGAACAACCTTAATTCTTTACAGGTTGTTGGAGTTGTCGGA
TTTATGGATCGTAGATTGGAAATTCCGGAACATCTTGATACTCGAGTATCTTCAATCATC
CTTGATTGTTGGCAAAGCAATCCAGCACTCCGTCCATCGTTCCAAGACATAATCCAAAGG
ACGACAGACATAATTCTCTCGTTTACCGGATCAACGACAGCTAGGAAGAATATAGGGACA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400010240
PEP Infomation

pacid=37469102 transcript=PGSC0003DMT400014794 locus=PGSC0003DMG400005773 ID=PGSC0003DMT400014794.v4.03 annot-version=v4.03
Sequence

MYGGAGDDETNPGLVKRFYSLESSHRKLQEQLNVLLQEKKIDDSLKMDDSDEKLMDSGEM
GFHVPGVFSTGSPYRNVLNYMGHAVHVSRASTGEIIYWNRSAERLYGYKEHEVLGQMTTE
FLICEEYHQLVRIARERLRCGQSWSGLFPCKKRYGQIFMAMLTKSPLYENGELFGIITVS
NDAASFINTNSNDTSSHEDNGEPGARGIDFKRIQWNQRPQIASSVSNLASKVFSLKRGED
ASAEVSTKDEADLDTKEGKPLKPPRAPATRLSFSLLGGKNRANTESSEKDESTFDIAQPS
KFAAKIMSKLNIAGFGHISKEKGQQNGDDDTPVGENVAEPHSPTASDSTGKYCHLVDAHH
HLQKNQKGNPGRTCATTGHDGPGGSSSRNSDKFPETLEIPEQIPGSCMSDELQQSPKSGG
STDSHGSSPFKVENESSLIVDCAILWEDISLKEEIGRGSYGVVYRGIWNASDVAVKVYFG
NQCSEETLLDYKKEVEIMKRLRHPNVLLFMGAVYSQDKSAIVTEFLPRGSLFKTLHGNNH
LLDFRRRLRMALDVARGMNYLHRWNPPIVHRDLKSSNLLVDKSWTVKVGDFGLSRFKDST
FLTTKSGRGTPQWMAPEVLRDEPSTEKSDVFSFGVILWELMTESIPWNNLNSLQVVGVVG
FMDRRLEIPEHLDTRVSSIILDCWQSNPALRPSFQDIIQRTTDIILSFTGSTTARKNIGT
*

Transcript Sequence

Transcript ID

PGSC0003DMT400014794
Transcript Infomation

pacid=37469102 locus=PGSC0003DMG400005773 ID=PGSC0003DMT400014794.v4.03 annot-version=v4.03
Sequence

ATGTACGGTGGAGCCGGCGACGATGAGACAAACCCAGGTTTGGTTAAACGATTTTACTCA
CTTGAATCGAGTCATAGGAAGCTTCAAGAACAGTTAAATGTTTTATTGCAAGAAAAAAAG
ATTGATGATTCATTGAAAATGGATGATTCAGATGAGAAATTAATGGATTCGGGTGAAATG
GGGTTTCATGTTCCTGGGGTTTTTTCTACTGGAAGTCCGTACAGGAATGTGTTGAATTAT
ATGGGTCATGCTGTTCATGTAAGTAGAGCTAGTACAGGGGAGATAATTTACTGGAATCGA
TCTGCTGAAAGACTTTATGGTTATAAAGAGCATGAAGTACTTGGACAGATGACCACTGAG
TTCCTTATATGTGAAGAATATCATCAACTGGTAAGGATTGCCAGGGAAAGATTGCGCTGT
GGACAATCATGGTCCGGTCTGTTTCCTTGTAAGAAGAGGTATGGTCAGATATTTATGGCA
ATGTTGACGAAGAGCCCATTGTACGAGAATGGCGAGCTTTTTGGTATTATCACTGTTTCA
AATGACGCAGCTTCATTCATTAATACAAACTCAAACGACACAAGTTCCCATGAGGACAAT
GGTGAACCTGGTGCTCGAGGAATAGATTTCAAAAGGATTCAATGGAATCAACGACCACAA
ATTGCATCATCTGTTTCAAATCTGGCCTCGAAAGTTTTCTCACTGAAGCGTGGAGAAGAT
GCATCTGCAGAAGTGAGCACTAAGGATGAGGCTGATTTAGACACCAAAGAAGGAAAACCA
CTGAAGCCACCCAGAGCACCAGCGACACGGCTGAGTTTCAGTTTGCTTGGTGGAAAGAAT
AGAGCTAACACAGAGAGCTCTGAGAAGGATGAATCTACATTTGACATCGCTCAGCCTTCC
AAATTTGCGGCAAAGATTATGTCAAAGCTGAATATTGCAGGATTTGGGCACATTAGTAAA
GAGAAGGGTCAACAGAACGGGGATGATGATACTCCTGTTGGTGAGAATGTAGCTGAACCA
CATTCACCAACGGCATCCGATTCTACTGGAAAATATTGTCACTTAGTTGATGCACATCAT
CACCTCCAGAAAAACCAGAAAGGAAATCCAGGAAGAACGTGTGCCACAACTGGGCATGAC
GGTCCTGGAGGGTCCTCCTCAAGGAACTCCGATAAATTTCCCGAGACACTTGAAATTCCT
GAACAGATTCCAGGATCATGTATGAGTGATGAACTCCAGCAATCGCCTAAGTCAGGTGGG
AGCACAGATAGCCATGGAAGTTCACCATTCAAGGTTGAGAATGAGTCGAGTTTGATAGTA
GATTGTGCAATTCTATGGGAAGACATTAGCCTAAAGGAGGAAATTGGACGAGGTTCATAT
GGTGTTGTGTATCGTGGAATCTGGAATGCATCGGATGTTGCTGTTAAGGTTTACTTTGGG
AATCAATGCAGTGAGGAAACATTGCTTGACTACAAAAAGGAGGTTGAAATAATGAAAAGA
CTCAGACATCCTAACGTGTTGCTATTCATGGGGGCCGTATATTCTCAAGATAAATCGGCC
ATCGTCACAGAGTTCTTACCTAGGGGAAGTCTTTTCAAAACACTTCATGGAAATAATCAT
CTATTAGACTTCAGACGGCGTCTTAGGATGGCCCTCGATGTGGCAAGAGGTATGAATTAT
TTGCATCGCTGGAACCCACCTATTGTACATAGAGACCTTAAATCATCAAACCTGCTTGTT
GATAAAAGTTGGACCGTCAAGGTTGGAGATTTTGGCCTATCAAGATTTAAAGATTCAACC
TTTTTAACAACAAAATCTGGTCGAGGGACGCCCCAGTGGATGGCTCCTGAAGTACTTCGA
GATGAACCTTCAACAGAAAAATCCGACGTCTTCAGTTTTGGCGTGATCTTATGGGAATTA
ATGACTGAATCTATTCCATGGAACAACCTTAATTCTTTACAGGTTGTTGGAGTTGTCGGA
TTTATGGATCGTAGATTGGAAATTCCGGAACATCTTGATACTCGAGTATCTTCAATCATC
CTTGATTGTTGGCAAAGCAATCCAGCACTCCGTCCATCGTTCCAAGACATAATCCAAAGG
ACGACAGACATAATTCTCTCGTTTACCGGATCAACGACAGCTAGGAAGAATATAGGGACA
TAA