Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014739
CDS Infomation

pacid=37460710 polypeptide=PGSC0003DMP400010202 locus=PGSC0003DMG400005743 ID=PGSC0003DMT400014739.v4.03 annot-version=v4.03
Sequence

ATGGCTCACTGGATCTCTTCCAAGCTCAAAGTCGCCGAAAATCTCCTTCATCAGATAGAT
CAACAAGCAGCTGATTCACTCCGTAAGAGTGAGAAGCAGCGATCTGATGATATAGATCGT
GAAAACATAGCCAAAACTAATGAAAACAAGCCACTTAAGGATCAATTCAAAAAGAAAAGT
CTTGAAAAAAATGATATAATTCAGAAAGCCAAAAGTGATCGCAATTCTTCTTCTATTAGC
CTGGATAAGAATAATAGCTTTGGCAGCAATAGTAATTATAAGATACATAAGGAAGCGGTG
ACGCCAGTAGATTCGAGTCCCAAGTCCAGTCCCAATGCTCTGACTGATAATGATTGGACT
GAATTACTAAGTGCACCGTGCCCAAATGCCACTGCTGGGGGGACTACTAGTAGTAATGGA
GTTGGAAGTTCCCGCAGTGGTCGGAATGATGGTAGAAAGCAAAGAAGTTTGGGGTCTGGG
TCAAATTTACCAGCTTTGGATGGGAAAAGGAGCCATAAACCTCAAAAGGTTGTTAAGAGT
GTTAAAGGGCCAAATACCCATTCAGAAAATGAGGCAGACGGTAGAAGGATAGACAGAAGA
GCTAGCAAAGTGGACTATACAATGCCGGTGACTTCAAATGTTGAACTCAAAATTGATGGG
GAAGGTTTGGGTAAGGGGGACCATCATCGAAAACATGAAAATGTGAAGTCCTTGCATGGA
AATAAGGATGTACAAAATGAAGTAAAGAATGAAGGTTTGGACGTTGTTAAGGGTGTAGAT
CTGTCTCCGGTGAATAATCGTTCTGGAGATAAGAGCCTTGGCATTGTACCGGGGTCTTCC
ACTCTTAATAAGGAAGTGGACATGAAGAATAAACTGGATGACAATCAGAGGAATAGGCCT
GCAAAGGCTATGGTTGACAGACCAAAATTGGACTCTCGGAGTTCCACTTCTCTGAAGATG
AGCTCTTCTTCACCTAGTAATGCAGAGTCTGATTCTGAGACAGATTCAACATCTTCATCA
GACTCGGAAAGTGAACGTGAAAGAGAAGAAAGGAGAAGAAGAAGGCAACAGATCCTGGCT
GAAAAAGCAGCCGCAAAAGCAATGGAAGCTATAAAAGAACGTGAGAACAAGGTTGCTAAA
TTGGAAGGGGAGAAACAGAGCTTAGAAAAAATACTTGAAGAGCGGGCCAAACAACAAGTT
CAAGAGGCTTCTGAGTTACAGACGAAAATGATGGAAACAATGGAAGCTGTTGAGTTGGAG
AAACAGAAACATAATAGTACTAGAATGGAAACTCTTGGCCGATTGGCAAAGCTTGAGACT
GTCAATGCTGAACTTGCAAGGTCTCTCGCTTCTGTTCAATGGAATCTTGAAGTAGAGGTT
AGTCAGGTTGCTGAACTACGCCAACAAATTGAGTTAAAAGAAGCGGCTCATGAAGGTCTG
CGTTTGATATCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400010202
PEP Infomation

pacid=37460710 transcript=PGSC0003DMT400014739 locus=PGSC0003DMG400005743 ID=PGSC0003DMT400014739.v4.03 annot-version=v4.03
Sequence

MAHWISSKLKVAENLLHQIDQQAADSLRKSEKQRSDDIDRENIAKTNENKPLKDQFKKKS
LEKNDIIQKAKSDRNSSSISLDKNNSFGSNSNYKIHKEAVTPVDSSPKSSPNALTDNDWT
ELLSAPCPNATAGGTTSSNGVGSSRSGRNDGRKQRSLGSGSNLPALDGKRSHKPQKVVKS
VKGPNTHSENEADGRRIDRRASKVDYTMPVTSNVELKIDGEGLGKGDHHRKHENVKSLHG
NKDVQNEVKNEGLDVVKGVDLSPVNNRSGDKSLGIVPGSSTLNKEVDMKNKLDDNQRNRP
AKAMVDRPKLDSRSSTSLKMSSSSPSNAESDSETDSTSSSDSESEREREERRRRRQQILA
EKAAAKAMEAIKERENKVAKLEGEKQSLEKILEERAKQQVQEASELQTKMMETMEAVELE
KQKHNSTRMETLGRLAKLETVNAELARSLASVQWNLEVEVSQVAELRQQIELKEAAHEGL
RLIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400014739
Transcript Infomation

pacid=37460710 locus=PGSC0003DMG400005743 ID=PGSC0003DMT400014739.v4.03 annot-version=v4.03
Sequence

ATGGCTCACTGGATCTCTTCCAAGCTCAAAGTCGCCGAAAATCTCCTTCATCAGATAGAT
CAACAAGCAGCTGATTCACTCCGTAAGAGTGAGAAGCAGCGATCTGATGATATAGATCGT
GAAAACATAGCCAAAACTAATGAAAACAAGCCACTTAAGGATCAATTCAAAAAGAAAAGT
CTTGAAAAAAATGATATAATTCAGAAAGCCAAAAGTGATCGCAATTCTTCTTCTATTAGC
CTGGATAAGAATAATAGCTTTGGCAGCAATAGTAATTATAAGATACATAAGGAAGCGGTG
ACGCCAGTAGATTCGAGTCCCAAGTCCAGTCCCAATGCTCTGACTGATAATGATTGGACT
GAATTACTAAGTGCACCGTGCCCAAATGCCACTGCTGGGGGGACTACTAGTAGTAATGGA
GTTGGAAGTTCCCGCAGTGGTCGGAATGATGGTAGAAAGCAAAGAAGTTTGGGGTCTGGG
TCAAATTTACCAGCTTTGGATGGGAAAAGGAGCCATAAACCTCAAAAGGTTGTTAAGAGT
GTTAAAGGGCCAAATACCCATTCAGAAAATGAGGCAGACGGTAGAAGGATAGACAGAAGA
GCTAGCAAAGTGGACTATACAATGCCGGTGACTTCAAATGTTGAACTCAAAATTGATGGG
GAAGGTTTGGGTAAGGGGGACCATCATCGAAAACATGAAAATGTGAAGTCCTTGCATGGA
AATAAGGATGTACAAAATGAAGTAAAGAATGAAGGTTTGGACGTTGTTAAGGGTGTAGAT
CTGTCTCCGGTGAATAATCGTTCTGGAGATAAGAGCCTTGGCATTGTACCGGGGTCTTCC
ACTCTTAATAAGGAAGTGGACATGAAGAATAAACTGGATGACAATCAGAGGAATAGGCCT
GCAAAGGCTATGGTTGACAGACCAAAATTGGACTCTCGGAGTTCCACTTCTCTGAAGATG
AGCTCTTCTTCACCTAGTAATGCAGAGTCTGATTCTGAGACAGATTCAACATCTTCATCA
GACTCGGAAAGTGAACGTGAAAGAGAAGAAAGGAGAAGAAGAAGGCAACAGATCCTGGCT
GAAAAAGCAGCCGCAAAAGCAATGGAAGCTATAAAAGAACGTGAGAACAAGGTTGCTAAA
TTGGAAGGGGAGAAACAGAGCTTAGAAAAAATACTTGAAGAGCGGGCCAAACAACAAGTT
CAAGAGGCTTCTGAGTTACAGACGAAAATGATGGAAACAATGGAAGCTGTTGAGTTGGAG
AAACAGAAACATAATAGTACTAGAATGGAAACTCTTGGCCGATTGGCAAAGCTTGAGACT
GTCAATGCTGAACTTGCAAGGTCTCTCGCTTCTGTTCAATGGAATCTTGAAGTAGAGGTT
AGTCAGGTTGCTGAACTACGCCAACAAATTGAGTTAAAAGAAGCGGCTCATGAAGGTCTG
CGTTTGATATCTTGA