Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014714
CDS Infomation

pacid=37461568 polypeptide=PGSC0003DMP400010187 locus=PGSC0003DMG400005738 ID=PGSC0003DMT400014714.v4.03 annot-version=v4.03
Sequence

ATGGCATTCTCAATTTCTCTTCCAGACTTTGTTCATCCTCAACTCCGTCATGTTGTTGCA
AAGATGTCTTTGTTTGACACAATTTTGTTCTATGTTGTACATCTTGTGGACAAGTTTGAT
TTATGGCATAGATTGCCGGTGTTACTAGGGGCGGCTTACCTAGGAATAAGAAGACACTTG
CACCAGCGATACAACCTTTTACATGTAGGGAAAGTTAATGGCAAGAAATATGACACAAAA
GAGTTTACCTATCGGACTGCTGATGGTACGTGCAATCATCCTGTGGATCATTTAGTAGGC
AGTCAAGGAACCTTCTTTGGCCGCAACATGCTACCATCCACTTCAAGTTATGCGCTGCTG
GAACCTCACCCTGTAACCGTGGCCACCAAGCTCTTGGAAAGAAGAAAGTACACAGATTGC
GGGGGGCAATTCAACATGATAGCGTGCGCGTGGGTACAATTTATGATCCATGATTGGAAT
GACCATATGGAGGACACTGAACAGGTGGAGCTTAGAGCTCCTCAAGACGTTGCAGCAGGG
TGTCCGTTGAAGTCATTTAAGTTCCTTAAGACCAAGAAACTTCCCACAGGCTCCCCTGAT
CTGAAGTTTGGGCATTTGAATTCAAGGACCCCATGGTGGGATGGGAGTGTAATATATGGC
AACAACGAAGAGGGCATGATAAGGGTGAGAAGATTTAAAGAAGGAAAGCTCAGGGTCTCA
GGTGATGGACTTCTGGAACATGATGATAAAGGCATTCCAATATCCGGAGATGTCCGAAAC
TATTGGGCAGGCTACTCTCTCTTGCAGGCCTTGTTTGTGAAGGAACATAATGCCATATGT
GATATGCTTAAAGAACATTACCCTGAATTTGATGATGAAAAGGTGTACCGACATGCAAGA
TTGATAACTTCAGCGGTCATTGCAAAAATCCATACTATCGATTGGACGCTTGAACTTGTT
AAGACTGATACTCTAATGGCAGGAATGAGGATCAACTGGTATGGCTTGTTGGGGAAGAAA
GTCAAGGATTTATTAGGACCCAAATTTGGACCAGTACTGAGTGGCTTAGTTGGTCTTAAA
AAGCCTAGAGACCACGGAACTCCCTACTCATTGACTGAAGAGTTCGTTAGTGTCTACAGA
ATGCATTCACTTTTACCTGACACGATTGTTCTGAGGGACTTGAAGTCGACTACATCAGAA
GACAAATCCTTGCCTATTCAAGATGAGATTCCTATGAGGGAAATGATCGGGAAAGAAGGA
GAAAAGAACTTGTCGAAAATCGGTATGGAGCAGATGCTGGTATCAATGGGCCACCAGTCA
TGTGGAGCTGCTACGTTGTGGAATTTTCCATCATGGATGAGGAACCTTGTTCCTCATGAT
ATCGATGGAGATGATAGACTTGATTTAATTGACATGGCCGCCTTGGACAGTATGTTTTAT
CCCAGTGGACTTCTTTTGCATATTGTTTTCATCTTATATATATAG

Peptide Sequence

PEP ID

PGSC0003DMP400010187
PEP Infomation

pacid=37461568 transcript=PGSC0003DMT400014714 locus=PGSC0003DMG400005738 ID=PGSC0003DMT400014714.v4.03 annot-version=v4.03
Sequence

MAFSISLPDFVHPQLRHVVAKMSLFDTILFYVVHLVDKFDLWHRLPVLLGAAYLGIRRHL
HQRYNLLHVGKVNGKKYDTKEFTYRTADGTCNHPVDHLVGSQGTFFGRNMLPSTSSYALL
EPHPVTVATKLLERRKYTDCGGQFNMIACAWVQFMIHDWNDHMEDTEQVELRAPQDVAAG
CPLKSFKFLKTKKLPTGSPDLKFGHLNSRTPWWDGSVIYGNNEEGMIRVRRFKEGKLRVS
GDGLLEHDDKGIPISGDVRNYWAGYSLLQALFVKEHNAICDMLKEHYPEFDDEKVYRHAR
LITSAVIAKIHTIDWTLELVKTDTLMAGMRINWYGLLGKKVKDLLGPKFGPVLSGLVGLK
KPRDHGTPYSLTEEFVSVYRMHSLLPDTIVLRDLKSTTSEDKSLPIQDEIPMREMIGKEG
EKNLSKIGMEQMLVSMGHQSCGAATLWNFPSWMRNLVPHDIDGDDRLDLIDMAALDSMFY
PSGLLLHIVFILYI*

Transcript Sequence

Transcript ID

PGSC0003DMT400014714
Transcript Infomation

pacid=37461568 locus=PGSC0003DMG400005738 ID=PGSC0003DMT400014714.v4.03 annot-version=v4.03
Sequence

ATGGCATTCTCAATTTCTCTTCCAGACTTTGTTCATCCTCAACTCCGTCATGTTGTTGCA
AAGATGTCTTTGTTTGACACAATTTTGTTCTATGTTGTACATCTTGTGGACAAGTTTGAT
TTATGGCATAGATTGCCGGTGTTACTAGGGGCGGCTTACCTAGGAATAAGAAGACACTTG
CACCAGCGATACAACCTTTTACATGTAGGGAAAGTTAATGGCAAGAAATATGACACAAAA
GAGTTTACCTATCGGACTGCTGATGGTACGTGCAATCATCCTGTGGATCATTTAGTAGGC
AGTCAAGGAACCTTCTTTGGCCGCAACATGCTACCATCCACTTCAAGTTATGCGCTGCTG
GAACCTCACCCTGTAACCGTGGCCACCAAGCTCTTGGAAAGAAGAAAGTACACAGATTGC
GGGGGGCAATTCAACATGATAGCGTGCGCGTGGGTACAATTTATGATCCATGATTGGAAT
GACCATATGGAGGACACTGAACAGGTGGAGCTTAGAGCTCCTCAAGACGTTGCAGCAGGG
TGTCCGTTGAAGTCATTTAAGTTCCTTAAGACCAAGAAACTTCCCACAGGCTCCCCTGAT
CTGAAGTTTGGGCATTTGAATTCAAGGACCCCATGGTGGGATGGGAGTGTAATATATGGC
AACAACGAAGAGGGCATGATAAGGGTGAGAAGATTTAAAGAAGGAAAGCTCAGGGTCTCA
GGTGATGGACTTCTGGAACATGATGATAAAGGCATTCCAATATCCGGAGATGTCCGAAAC
TATTGGGCAGGCTACTCTCTCTTGCAGGCCTTGTTTGTGAAGGAACATAATGCCATATGT
GATATGCTTAAAGAACATTACCCTGAATTTGATGATGAAAAGGTGTACCGACATGCAAGA
TTGATAACTTCAGCGGTCATTGCAAAAATCCATACTATCGATTGGACGCTTGAACTTGTT
AAGACTGATACTCTAATGGCAGGAATGAGGATCAACTGGTATGGCTTGTTGGGGAAGAAA
GTCAAGGATTTATTAGGACCCAAATTTGGACCAGTACTGAGTGGCTTAGTTGGTCTTAAA
AAGCCTAGAGACCACGGAACTCCCTACTCATTGACTGAAGAGTTCGTTAGTGTCTACAGA
ATGCATTCACTTTTACCTGACACGATTGTTCTGAGGGACTTGAAGTCGACTACATCAGAA
GACAAATCCTTGCCTATTCAAGATGAGATTCCTATGAGGGAAATGATCGGGAAAGAAGGA
GAAAAGAACTTGTCGAAAATCGGTATGGAGCAGATGCTGGTATCAATGGGCCACCAGTCA
TGTGGAGCTGCTACGTTGTGGAATTTTCCATCATGGATGAGGAACCTTGTTCCTCATGAT
ATCGATGGAGATGATAGACTTGATTTAATTGACATGGCCGCCTTGGACAGTATGTTTTAT
CCCAGTGGACTTCTTTTGCATATTGTTTTCATCTTATATATATAG