Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014653
CDS Infomation

pacid=37462710 polypeptide=PGSC0003DMP400010144 locus=PGSC0003DMG402005724 ID=PGSC0003DMT400014653.v4.03 annot-version=v4.03
Sequence

ATGGGTAGTAAATCCAGAACTATGCTGGAGGGTCTGGTTAAACAGGGGTCGTTTAAATGG
TTGACCAAAACCCCGAGTTCATTTGATGAAGATTTAGATGAGATGGGGTCTTCATCCACT
GGCAAGAGTTGGTTGCCAGAGCTATCTCCTGCTGCAAATGTAGTAATCCGAAAATGCTCA
AAAATCTTTGGTATTCCCATGAATCAACTTCAAGAAAACTTTGAGGCTGAGGCTTCTGAA
TCCATAAAGCATAAATCTCAGTATGCAAGGAACTTCTTGGAATACTGTTGCTTTAGGGCT
CTTGCCTTGTCTATACAAGTAAATGGTTACCTTGGCGACAAACAGTTTCGACACCTTACA
TTTGACATGATGGTTGCATGGGAGTTTCCAGCAGCTTCAAGTCAGCCTTTTGCCAGTATG
GATGAAGATGTCACTGCTGGTCTTGAGGCCTTTTCCCGTATTGCTTCAGCAGTTCCTATA
ATTTCCAATGCGATAGTTACTGATAGTATTTTCGGTGTGCTTACGTCATCAACAGGAGGT
CGACTTCTATTCTCAGTCTATGACAAGTACCTGACCTGTTTGGAAAGGGCAATTAAAAAA
TTTAAGAACCAGTCTGAATCATCCCATCTGTCTGCCTTACGTACAGCAAGAGGGGAGAAA
ATTCTGGAGCTGGACGGGACTGTGACAACCCAGCCGGTGCTTGAACATGTGGGAATTTCA
GCATGGCCTGGTCGGCTAACTTTGACGGATCATGCTCTCTACTTTGAGGCACATCGTGTT
GTGTCTTATGACAAGCCAAAGTTATATGATCTGTCAGATGATCTGAACCAGATTGTTAGA
CCTGAACTAACTGGACCATGGGGCACAAGACTCTTTGATAAAGCAGTCTCCTACAAATCA
GTTTCCTTGTCAGAACCTGTTATAATGGAATTTCCTGAGCTTAAAGGACATACACGCCGT
GACTATTGGTTAGCCATTATTCGGGAAGTTCTACATGTGCATCAGTTCATTCTTAAATTC
CAGATTACTGGAATTGAGCGTGATGAGGCGCTTCTAAAAGCTATATTTGGCATATTGCGA
GTACAAGCCCTGAAAGATATGACCTCTAAACATTCACTTTGCTATGAGGATCTTCTTATG
TTCAATGTATGTGATCAGCTTCCCGGAGGAGACCTTATACTAGAAACAATTGCAAATAGG
TCAACTGTGAGGGCACTGGAGCGGACAAACTCTACCAAACCTAAAAACAGAATGTACTCA
ATTTCAGCTTCAGCCTTGGCTTCCAACCTGGGGTTAGTTTTTGGGACAAGTTCTCATGTT
CCTAATGAGCCAGGAATTGTTGTGGGTGAAATTTCTGTGGGGGAGATGACTCCCTTGGAA
AAAGCAGTTAAGGAATCCAGAAGCAACTATAGAAAGGTGGTGCAAGCACAAGCTACGGTT
GATGGAGTGAAAGTTGATGGTCTTGACACCAATTTGGCAGTGATGAAGGAGTTGCTCTCT
CCTATGATGCAACTTGGGAATTGGATTCTTCTTCTGGCTTACTGGGAAGACCCTTTGAAG
TCCATGATTTTCTGTCTGGTTTTCTCATTCATTATTATCAGGGGATGGCTGTGCTATGCC
TTTGCACTATTGCTAACTTTTTTTGCTGTCTTTTTGGTAATAACTCGCTGCTTAAGTCAA
GGCAAGACAGTTGATGAACTAAAAGTAATGGTTCCGCCTTCAATGAATGCCATGGAGCAA
CTTTTGGCTGTTCAAAATGTAATATCTCAAGCTGAAGAACTAATCCAGGATGGAAACATC
GTTCTTCTCAAATTTCGCGCTTTACTTTTGTCCATCTTCCCACAGGCCACCGAGAAGTTA
GTGGGTGTTTTTTTGGTCTCGGCACTAGTTCTGGCATTCTTACCTTTGAGATACATAATC
CTTCTGACTTTCCTAGAACTCTTCACAAGATATTCACCTATTCGGAAAGCAAGCACAGAA
AAATGGTCTAGAAGACTAAGGGAATGGTGGTTCAGTATCCCTGCAGCTCCTGTAGTTCTT
GAAAAAGCCAAAGAAGACAAAAAGAAGAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400010144
PEP Infomation

pacid=37462710 transcript=PGSC0003DMT400014653 locus=PGSC0003DMG402005724 ID=PGSC0003DMT400014653.v4.03 annot-version=v4.03
Sequence

MGSKSRTMLEGLVKQGSFKWLTKTPSSFDEDLDEMGSSSTGKSWLPELSPAANVVIRKCS
KIFGIPMNQLQENFEAEASESIKHKSQYARNFLEYCCFRALALSIQVNGYLGDKQFRHLT
FDMMVAWEFPAASSQPFASMDEDVTAGLEAFSRIASAVPIISNAIVTDSIFGVLTSSTGG
RLLFSVYDKYLTCLERAIKKFKNQSESSHLSALRTARGEKILELDGTVTTQPVLEHVGIS
AWPGRLTLTDHALYFEAHRVVSYDKPKLYDLSDDLNQIVRPELTGPWGTRLFDKAVSYKS
VSLSEPVIMEFPELKGHTRRDYWLAIIREVLHVHQFILKFQITGIERDEALLKAIFGILR
VQALKDMTSKHSLCYEDLLMFNVCDQLPGGDLILETIANRSTVRALERTNSTKPKNRMYS
ISASALASNLGLVFGTSSHVPNEPGIVVGEISVGEMTPLEKAVKESRSNYRKVVQAQATV
DGVKVDGLDTNLAVMKELLSPMMQLGNWILLLAYWEDPLKSMIFCLVFSFIIIRGWLCYA
FALLLTFFAVFLVITRCLSQGKTVDELKVMVPPSMNAMEQLLAVQNVISQAEELIQDGNI
VLLKFRALLLSIFPQATEKLVGVFLVSALVLAFLPLRYIILLTFLELFTRYSPIRKASTE
KWSRRLREWWFSIPAAPVVLEKAKEDKKKR*

Transcript Sequence

Transcript ID

PGSC0003DMT400014653
Transcript Infomation

pacid=37462710 locus=PGSC0003DMG402005724 ID=PGSC0003DMT400014653.v4.03 annot-version=v4.03
Sequence

ATGGGTAGTAAATCCAGAACTATGCTGGAGGGTCTGGTTAAACAGGGGTCGTTTAAATGG
TTGACCAAAACCCCGAGTTCATTTGATGAAGATTTAGATGAGATGGGGTCTTCATCCACT
GGCAAGAGTTGGTTGCCAGAGCTATCTCCTGCTGCAAATGTAGTAATCCGAAAATGCTCA
AAAATCTTTGGTATTCCCATGAATCAACTTCAAGAAAACTTTGAGGCTGAGGCTTCTGAA
TCCATAAAGCATAAATCTCAGTATGCAAGGAACTTCTTGGAATACTGTTGCTTTAGGGCT
CTTGCCTTGTCTATACAAGTAAATGGTTACCTTGGCGACAAACAGTTTCGACACCTTACA
TTTGACATGATGGTTGCATGGGAGTTTCCAGCAGCTTCAAGTCAGCCTTTTGCCAGTATG
GATGAAGATGTCACTGCTGGTCTTGAGGCCTTTTCCCGTATTGCTTCAGCAGTTCCTATA
ATTTCCAATGCGATAGTTACTGATAGTATTTTCGGTGTGCTTACGTCATCAACAGGAGGT
CGACTTCTATTCTCAGTCTATGACAAGTACCTGACCTGTTTGGAAAGGGCAATTAAAAAA
TTTAAGAACCAGTCTGAATCATCCCATCTGTCTGCCTTACGTACAGCAAGAGGGGAGAAA
ATTCTGGAGCTGGACGGGACTGTGACAACCCAGCCGGTGCTTGAACATGTGGGAATTTCA
GCATGGCCTGGTCGGCTAACTTTGACGGATCATGCTCTCTACTTTGAGGCACATCGTGTT
GTGTCTTATGACAAGCCAAAGTTATATGATCTGTCAGATGATCTGAACCAGATTGTTAGA
CCTGAACTAACTGGACCATGGGGCACAAGACTCTTTGATAAAGCAGTCTCCTACAAATCA
GTTTCCTTGTCAGAACCTGTTATAATGGAATTTCCTGAGCTTAAAGGACATACACGCCGT
GACTATTGGTTAGCCATTATTCGGGAAGTTCTACATGTGCATCAGTTCATTCTTAAATTC
CAGATTACTGGAATTGAGCGTGATGAGGCGCTTCTAAAAGCTATATTTGGCATATTGCGA
GTACAAGCCCTGAAAGATATGACCTCTAAACATTCACTTTGCTATGAGGATCTTCTTATG
TTCAATGTATGTGATCAGCTTCCCGGAGGAGACCTTATACTAGAAACAATTGCAAATAGG
TCAACTGTGAGGGCACTGGAGCGGACAAACTCTACCAAACCTAAAAACAGAATGTACTCA
ATTTCAGCTTCAGCCTTGGCTTCCAACCTGGGGTTAGTTTTTGGGACAAGTTCTCATGTT
CCTAATGAGCCAGGAATTGTTGTGGGTGAAATTTCTGTGGGGGAGATGACTCCCTTGGAA
AAAGCAGTTAAGGAATCCAGAAGCAACTATAGAAAGGTGGTGCAAGCACAAGCTACGGTT
GATGGAGTGAAAGTTGATGGTCTTGACACCAATTTGGCAGTGATGAAGGAGTTGCTCTCT
CCTATGATGCAACTTGGGAATTGGATTCTTCTTCTGGCTTACTGGGAAGACCCTTTGAAG
TCCATGATTTTCTGTCTGGTTTTCTCATTCATTATTATCAGGGGATGGCTGTGCTATGCC
TTTGCACTATTGCTAACTTTTTTTGCTGTCTTTTTGGTAATAACTCGCTGCTTAAGTCAA
GGCAAGACAGTTGATGAACTAAAAGTAATGGTTCCGCCTTCAATGAATGCCATGGAGCAA
CTTTTGGCTGTTCAAAATGTAATATCTCAAGCTGAAGAACTAATCCAGGATGGAAACATC
GTTCTTCTCAAATTTCGCGCTTTACTTTTGTCCATCTTCCCACAGGCCACCGAGAAGTTA
GTGGGTGTTTTTTTGGTCTCGGCACTAGTTCTGGCATTCTTACCTTTGAGATACATAATC
CTTCTGACTTTCCTAGAACTCTTCACAAGATATTCACCTATTCGGAAAGCAAGCACAGAA
AAATGGTCTAGAAGACTAAGGGAATGGTGGTTCAGTATCCCTGCAGCTCCTGTAGTTCTT
GAAAAAGCCAAAGAAGACAAAAAGAAGAGATGA