Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014648
CDS Infomation

pacid=37459128 polypeptide=PGSC0003DMP400010139 locus=PGSC0003DMG400005722 ID=PGSC0003DMT400014648.v4.03 annot-version=v4.03
Sequence

ATGGTTGAACCTCGCCGTAATTGTTTTTCTTTGCCTGCGGTGAATTTATTCAAAAGGGCT
GTTGCTGGTGTACTCTCTGTCACCGTGATGTCTGCCAGCAAATTGTCAAGGAGTAACCTG
AGGACTAGTCCTTCCAGGAAACAACACAGCTCATCAACAGATGGTTATGTGGAGAATTCT
AATGATTACAAGGACTTGCGGACATTTGTTGAGGTTGAACTTGAAGAATTAACCAGGAGA
ACAGAGGTTCAACCAGGATCCTGCCCTAGATGGGACTCAAAGTTCAATATGACTTTACAT
GAGGATGCAGGAACAATTAAGTTCAATTTATTTGAATGCACTCCCGGCGGTGTGAAGTAT
GACTATCTGACAAGCTGTGAAGTAAAGATGAGATATGTTGCAGACGATTCAACAATATTT
TGGGCGACGGGAGCAGACTCCACTGCTATAGCCAGGCATGCGGAGTTTTGTGGTAAAGAA
ATTGAAATGACGGTGCCATTTGAGGGGATCAATTCAGGGGAGTTGACGGTGAAACTCATT
TTAAAGGAATGGCAATTTGCTGATGGTTCACATAGCTCAAATGGTTTGCCTATGAGCTCT
CAGCCTTCACTCAACGGCACATCAAGTTTCCTACCTAGAACAGGAAGAAAAATCTATGTG
ACAATAGCTGAAGGAAAAGATCTTCCATCAAAAGATAAATATGGAAAGCTTGGTTCTGGC
TGTTACGTGAAATTCCAGTATGGGAAGGCTCTCAAAAGATCGAGAACTGTTCCACATACA
TCAGATGCTATCTGGAATCAGAAGTTTGAGTTCGATGAAATTGCTGGTGGTGAATATCTG
AAGATAAAATGCTTCATCGAGGAGATGTTTGCAGATGAGAACATTGGTAGTGCACGAGTA
AACTTAGAAGGACTTATAGAAGGCTCCCCAAGGGATGTGTGGATTCCTCTTGAAAAAGTG
AATTCTGGAGAATTGCGGCTCCAGATTGAAGCAGTCAGAGTTGAGGACTCTGAAGGACCC
AAGGGTTCAACTTCCAATGGTTGGGTTGAACTTGCTCTCATTGAGGCTAAAGACCTTGTT
GGTGCGGATCTCCGAGGAACCAGTGATCCTTATGTGAGGGTACAATATGGGAACTTGAAG
AGAAGAACTAAGGTTATGTATAAAACGGTGAATCCAAAATGGCACCAGACGCTAGAATTT
CCTGATGACGGGAGTCCCCTGGAGTTGCATGTTAAGGACCACAACCATTTGCTGCCAACG
TCAAGCATAGGTGATTGTGTTGTTGAGTACCAGAGGTTGCCTCCAAATCAAATGTTCGAT
AAGTGGATACCCCTTCAAAATGTAAAGAAGGGAGAGATCCATATTCAAGTCACGCGTAAA
GTTCCGGATCTAGAAAAGAAATCAAGCTTAGATTCTGAGTCTTCAGTAACCAAAGCACGC
CGCCAAATTTCTAACCAGATGAAGCAAATGATGATCAAGTTCCAGTCTTTAATTGAAGAC
GATGATCTGGAAGGACTTTCAGCATCGTTGCACGAAATGGAAAGCCTACATGACACACAG
GAAGAGTTTATGGTCCAGCTTGAGACTGAACAAACACTTTTGCTCAGCAAGATAAATGAG
CTTGGACAGGAAATCATTAATTCATCACCTTCCTATGCTTTGAGTAGAAGACCTACTTTA
CCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400010139
PEP Infomation

pacid=37459128 transcript=PGSC0003DMT400014648 locus=PGSC0003DMG400005722 ID=PGSC0003DMT400014648.v4.03 annot-version=v4.03
Sequence

MVEPRRNCFSLPAVNLFKRAVAGVLSVTVMSASKLSRSNLRTSPSRKQHSSSTDGYVENS
NDYKDLRTFVEVELEELTRRTEVQPGSCPRWDSKFNMTLHEDAGTIKFNLFECTPGGVKY
DYLTSCEVKMRYVADDSTIFWATGADSTAIARHAEFCGKEIEMTVPFEGINSGELTVKLI
LKEWQFADGSHSSNGLPMSSQPSLNGTSSFLPRTGRKIYVTIAEGKDLPSKDKYGKLGSG
CYVKFQYGKALKRSRTVPHTSDAIWNQKFEFDEIAGGEYLKIKCFIEEMFADENIGSARV
NLEGLIEGSPRDVWIPLEKVNSGELRLQIEAVRVEDSEGPKGSTSNGWVELALIEAKDLV
GADLRGTSDPYVRVQYGNLKRRTKVMYKTVNPKWHQTLEFPDDGSPLELHVKDHNHLLPT
SSIGDCVVEYQRLPPNQMFDKWIPLQNVKKGEIHIQVTRKVPDLEKKSSLDSESSVTKAR
RQISNQMKQMMIKFQSLIEDDDLEGLSASLHEMESLHDTQEEFMVQLETEQTLLLSKINE
LGQEIINSSPSYALSRRPTLP*

Transcript Sequence

Transcript ID

PGSC0003DMT400014648
Transcript Infomation

pacid=37459128 locus=PGSC0003DMG400005722 ID=PGSC0003DMT400014648.v4.03 annot-version=v4.03
Sequence

ATGGTTGAACCTCGCCGTAATTGTTTTTCTTTGCCTGCGGTGAATTTATTCAAAAGGGCT
GTTGCTGGTGTACTCTCTGTCACCGTGATGTCTGCCAGCAAATTGTCAAGGAGTAACCTG
AGGACTAGTCCTTCCAGGAAACAACACAGCTCATCAACAGATGGTTATGTGGAGAATTCT
AATGATTACAAGGACTTGCGGACATTTGTTGAGGTTGAACTTGAAGAATTAACCAGGAGA
ACAGAGGTTCAACCAGGATCCTGCCCTAGATGGGACTCAAAGTTCAATATGACTTTACAT
GAGGATGCAGGAACAATTAAGTTCAATTTATTTGAATGCACTCCCGGCGGTGTGAAGTAT
GACTATCTGACAAGCTGTGAAGTAAAGATGAGATATGTTGCAGACGATTCAACAATATTT
TGGGCGACGGGAGCAGACTCCACTGCTATAGCCAGGCATGCGGAGTTTTGTGGTAAAGAA
ATTGAAATGACGGTGCCATTTGAGGGGATCAATTCAGGGGAGTTGACGGTGAAACTCATT
TTAAAGGAATGGCAATTTGCTGATGGTTCACATAGCTCAAATGGTTTGCCTATGAGCTCT
CAGCCTTCACTCAACGGCACATCAAGTTTCCTACCTAGAACAGGAAGAAAAATCTATGTG
ACAATAGCTGAAGGAAAAGATCTTCCATCAAAAGATAAATATGGAAAGCTTGGTTCTGGC
TGTTACGTGAAATTCCAGTATGGGAAGGCTCTCAAAAGATCGAGAACTGTTCCACATACA
TCAGATGCTATCTGGAATCAGAAGTTTGAGTTCGATGAAATTGCTGGTGGTGAATATCTG
AAGATAAAATGCTTCATCGAGGAGATGTTTGCAGATGAGAACATTGGTAGTGCACGAGTA
AACTTAGAAGGACTTATAGAAGGCTCCCCAAGGGATGTGTGGATTCCTCTTGAAAAAGTG
AATTCTGGAGAATTGCGGCTCCAGATTGAAGCAGTCAGAGTTGAGGACTCTGAAGGACCC
AAGGGTTCAACTTCCAATGGTTGGGTTGAACTTGCTCTCATTGAGGCTAAAGACCTTGTT
GGTGCGGATCTCCGAGGAACCAGTGATCCTTATGTGAGGGTACAATATGGGAACTTGAAG
AGAAGAACTAAGGTTATGTATAAAACGGTGAATCCAAAATGGCACCAGACGCTAGAATTT
CCTGATGACGGGAGTCCCCTGGAGTTGCATGTTAAGGACCACAACCATTTGCTGCCAACG
TCAAGCATAGGTGATTGTGTTGTTGAGTACCAGAGGTTGCCTCCAAATCAAATGTTCGAT
AAGTGGATACCCCTTCAAAATGTAAAGAAGGGAGAGATCCATATTCAAGTCACGCGTAAA
GTTCCGGATCTAGAAAAGAAATCAAGCTTAGATTCTGAGTCTTCAGTAACCAAAGCACGC
CGCCAAATTTCTAACCAGATGAAGCAAATGATGATCAAGTTCCAGTCTTTAATTGAAGAC
GATGATCTGGAAGGACTTTCAGCATCGTTGCACGAAATGGAAAGCCTACATGACACACAG
GAAGAGTTTATGGTCCAGCTTGAGACTGAACAAACACTTTTGCTCAGCAAGATAAATGAG
CTTGGACAGGAAATCATTAATTCATCACCTTCCTATGCTTTGAGTAGAAGACCTACTTTA
CCCTGA