Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014644
CDS Infomation

pacid=37458854 polypeptide=PGSC0003DMP400010135 locus=PGSC0003DMG401005721 ID=PGSC0003DMT400014644.v4.03 annot-version=v4.03
Sequence

ATGGCCTTGTCGACGGCGAAATTTACACAATTGACACCACAGTTGTTCTCTTCCTTCTCT
ACTCCTTCTGATCGACCTCCATTTTTCCTTTTCCTTCGCCGCACTATCACCGCCGGCAAC
ACCAGAACCAACATTCCCCGGAAGGATAATCGGAAACCTTACAGAGACTCAAATTCCAGT
TCGACCCCTGTGAAATCAAACAACTCTCGCTCTTCTACTTGGCTAAACAAATGGCCCAAT
ACATCTCCTCCAGTAAAGCATTCATCCAATTCCAGAACCGTCGAATCCAAAACGGAAACC
AGATATTTTGACGAGAACACAAGAGTAGGGACTACAGCCATAGATAGGATTGTGCTTCGG
TTGAGAAACTTAGGATTAGGCTCTGACGATGAAGGAGAAGGAGAAGATGAAGAAGAGGGA
AATTTGAAATTGGATTCTAGTTCGACAATGCAGGTTAACGGTGAAGAAGAGAAGTTAGGG
GATTTGTTGAAGAGGGATTGGGTTCGACCGGATATGATATTGGAAGAGAGTGATGATGAG
GGAGATACATATTTGCCATGGGAACGAAGTGTGGAGGAAGAGGCGGTGGAGGTGCAGAGG
GGAGGGAAGAGGACGGTAAAGGCACCGTCACTGGCTGAGCTAACCATTGAGGATGAGGAA
TTGAGGAGGCTGAGGAGAATGGGTATGACTTTGAGAGAAAGGATTAATGTACCTAAGGCT
GGGGTTACAGGAGCAGTGTTGGAGAAGATTCATCATTCATGGAGGAAGAATGAGCTGGTA
AGGCTCAAGTTTCATGAGGTTTTGGCTCATGATATGAGAACAGGCCACGAGATTGTAGAG
CGTCGGACAAGAGGGCTTGTGATATGGAGGGCTGGGAGCGTTATGGTGGTGTATCGAGGA
AGTAACTACGAGGGGCCTTCTTCAAGATCTCAATCTGTGAATGAGGAAGACAATGCTCTC
TTTGTTCCAGATGTTTCATCTGACAAATCTATTACAAAAGACAACAAAAGCTTTAATCCA
GTTATTGAAAATCGTAATCAAGTTCATCCTAATAGTGTCCAAAGCATGACTGTGGAGGAA
TCAGAATTCAATAGGGTATTAGATGGTTTAGGCCCACGTTTTGAGGATTGGTGGGGTACG
GGAGTACTTCCTGTTGATGCTGATTTGCTCCCTCAGACAATTCCTGGCTATAAAACACCT
TTCCGACTTCTTCCTACTGGAATGAGATCACGCCTAACAAATGCAGAAATGACTAATTTA
CGAAAAATTGCTAAATCACTTCCTTGTCATTTTGCTCTTGGGAGAAACAGAAATCATCAA
GGGCTGGCTGCTGCTATAGTCAAGCTCTGGGAGAAAAGTTTAGTTGTGAAAATAGCAGTC
AAACGTGGAATTCAGAACACAAACAACAAGCTGATGTCAGAAGAGTTAAAGATGTTAACA
GGAGGGGTCCTACTTCTGAGAAACAAATATTACATAATCTTTTATCGAGGAAAGGATTTT
GTCCCACCTACTGTTGCGGCTGTTTTAGCCGAAAGGCAAGAGTTGACAAAACAGATCCAA
GATGTTGAAGAGCAAACACGGAGCGGGCCTGCTAAAGTGGCACCATTGACCACAGATGGA
CAGGCCGTTGCCGGTTCTTTAGCAGAATTTTATGAGGCTCAGGCTCGGTGGGGGAGAGAA
ATATCTGCTGAAGAACGTGAGAGAATGTTAAAAGAAGCAGCAATGGCTAAGACGGCCAGA
GTAGTCAAGCGGCTTGAACATAAATTTGAGATTTCCCAGACCAAGAAGCTTAAGGCAGAG
AAAATTTTGGCTAAGATTGTGGAATCCTGGATTCCTGCTGGTCCTTCTGATGACCTGGAA
ACGATAACAGAGGAGGAAAGGGTCATGTTGCGCAGAGTTGGATTAAGAATGAAATCGTAC
CTGCCACTTGGTATTCGTGGTGTCTTTGATGGTGTTATTGAGAACATGCATCTGCATTGG
AAACATAGAGAACTTGTTAAGTTAATATCAAAAGAAAAGGTACTTGCTTTCGTTGAAGAA
ACAGCTAGACTTTTGGAATATGAAAGTGGTGGGATTTTAGTGGCAATAGAAAGAGTGCCA
AAAGGTTATGCTCTTATTTTCTACCGTGGGAAGAACTATAGGCGGCCTATCAGCCTCAGG
CCAAGGAACCTTCTGACAAAAGCAAAAGCACTAAAACGTAGAGTGGCACTGCAGCGTTAT
GAGGCTCTCAGTCAGCATATAGCCGAGCTGGAGACGACGATAGAGCAAACGAAAAGTAAA
ATTGTTGATTTTGGTAAGGCGGACATTAATACTAGCAATTTGGAGGCGCTTGATCAGTTC
AATCATGTCTCGGAATCCCTAAGTGAAGATGAAGATTCATCTTTAGAGTCTGGTGATGAC
GAGGATGAAGATCCTGAATGGGAAAATGATGACGATTCAGAGTACTCCAGTCTTGAGGAC
AATGACACAGGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400010135
PEP Infomation

pacid=37458854 transcript=PGSC0003DMT400014644 locus=PGSC0003DMG401005721 ID=PGSC0003DMT400014644.v4.03 annot-version=v4.03
Sequence

MALSTAKFTQLTPQLFSSFSTPSDRPPFFLFLRRTITAGNTRTNIPRKDNRKPYRDSNSS
STPVKSNNSRSSTWLNKWPNTSPPVKHSSNSRTVESKTETRYFDENTRVGTTAIDRIVLR
LRNLGLGSDDEGEGEDEEEGNLKLDSSSTMQVNGEEEKLGDLLKRDWVRPDMILEESDDE
GDTYLPWERSVEEEAVEVQRGGKRTVKAPSLAELTIEDEELRRLRRMGMTLRERINVPKA
GVTGAVLEKIHHSWRKNELVRLKFHEVLAHDMRTGHEIVERRTRGLVIWRAGSVMVVYRG
SNYEGPSSRSQSVNEEDNALFVPDVSSDKSITKDNKSFNPVIENRNQVHPNSVQSMTVEE
SEFNRVLDGLGPRFEDWWGTGVLPVDADLLPQTIPGYKTPFRLLPTGMRSRLTNAEMTNL
RKIAKSLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMSEELKMLT
GGVLLLRNKYYIIFYRGKDFVPPTVAAVLAERQELTKQIQDVEEQTRSGPAKVAPLTTDG
QAVAGSLAEFYEAQARWGREISAEERERMLKEAAMAKTARVVKRLEHKFEISQTKKLKAE
KILAKIVESWIPAGPSDDLETITEEERVMLRRVGLRMKSYLPLGIRGVFDGVIENMHLHW
KHRELVKLISKEKVLAFVEETARLLEYESGGILVAIERVPKGYALIFYRGKNYRRPISLR
PRNLLTKAKALKRRVALQRYEALSQHIAELETTIEQTKSKIVDFGKADINTSNLEALDQF
NHVSESLSEDEDSSLESGDDEDEDPEWENDDDSEYSSLEDNDTG*

Transcript Sequence

Transcript ID

PGSC0003DMT400014644
Transcript Infomation

pacid=37458854 locus=PGSC0003DMG401005721 ID=PGSC0003DMT400014644.v4.03 annot-version=v4.03
Sequence

ATGGCCTTGTCGACGGCGAAATTTACACAATTGACACCACAGTTGTTCTCTTCCTTCTCT
ACTCCTTCTGATCGACCTCCATTTTTCCTTTTCCTTCGCCGCACTATCACCGCCGGCAAC
ACCAGAACCAACATTCCCCGGAAGGATAATCGGAAACCTTACAGAGACTCAAATTCCAGT
TCGACCCCTGTGAAATCAAACAACTCTCGCTCTTCTACTTGGCTAAACAAATGGCCCAAT
ACATCTCCTCCAGTAAAGCATTCATCCAATTCCAGAACCGTCGAATCCAAAACGGAAACC
AGATATTTTGACGAGAACACAAGAGTAGGGACTACAGCCATAGATAGGATTGTGCTTCGG
TTGAGAAACTTAGGATTAGGCTCTGACGATGAAGGAGAAGGAGAAGATGAAGAAGAGGGA
AATTTGAAATTGGATTCTAGTTCGACAATGCAGGTTAACGGTGAAGAAGAGAAGTTAGGG
GATTTGTTGAAGAGGGATTGGGTTCGACCGGATATGATATTGGAAGAGAGTGATGATGAG
GGAGATACATATTTGCCATGGGAACGAAGTGTGGAGGAAGAGGCGGTGGAGGTGCAGAGG
GGAGGGAAGAGGACGGTAAAGGCACCGTCACTGGCTGAGCTAACCATTGAGGATGAGGAA
TTGAGGAGGCTGAGGAGAATGGGTATGACTTTGAGAGAAAGGATTAATGTACCTAAGGCT
GGGGTTACAGGAGCAGTGTTGGAGAAGATTCATCATTCATGGAGGAAGAATGAGCTGGTA
AGGCTCAAGTTTCATGAGGTTTTGGCTCATGATATGAGAACAGGCCACGAGATTGTAGAG
CGTCGGACAAGAGGGCTTGTGATATGGAGGGCTGGGAGCGTTATGGTGGTGTATCGAGGA
AGTAACTACGAGGGGCCTTCTTCAAGATCTCAATCTGTGAATGAGGAAGACAATGCTCTC
TTTGTTCCAGATGTTTCATCTGACAAATCTATTACAAAAGACAACAAAAGCTTTAATCCA
GTTATTGAAAATCGTAATCAAGTTCATCCTAATAGTGTCCAAAGCATGACTGTGGAGGAA
TCAGAATTCAATAGGGTATTAGATGGTTTAGGCCCACGTTTTGAGGATTGGTGGGGTACG
GGAGTACTTCCTGTTGATGCTGATTTGCTCCCTCAGACAATTCCTGGCTATAAAACACCT
TTCCGACTTCTTCCTACTGGAATGAGATCACGCCTAACAAATGCAGAAATGACTAATTTA
CGAAAAATTGCTAAATCACTTCCTTGTCATTTTGCTCTTGGGAGAAACAGAAATCATCAA
GGGCTGGCTGCTGCTATAGTCAAGCTCTGGGAGAAAAGTTTAGTTGTGAAAATAGCAGTC
AAACGTGGAATTCAGAACACAAACAACAAGCTGATGTCAGAAGAGTTAAAGATGTTAACA
GGAGGGGTCCTACTTCTGAGAAACAAATATTACATAATCTTTTATCGAGGAAAGGATTTT
GTCCCACCTACTGTTGCGGCTGTTTTAGCCGAAAGGCAAGAGTTGACAAAACAGATCCAA
GATGTTGAAGAGCAAACACGGAGCGGGCCTGCTAAAGTGGCACCATTGACCACAGATGGA
CAGGCCGTTGCCGGTTCTTTAGCAGAATTTTATGAGGCTCAGGCTCGGTGGGGGAGAGAA
ATATCTGCTGAAGAACGTGAGAGAATGTTAAAAGAAGCAGCAATGGCTAAGACGGCCAGA
GTAGTCAAGCGGCTTGAACATAAATTTGAGATTTCCCAGACCAAGAAGCTTAAGGCAGAG
AAAATTTTGGCTAAGATTGTGGAATCCTGGATTCCTGCTGGTCCTTCTGATGACCTGGAA
ACGATAACAGAGGAGGAAAGGGTCATGTTGCGCAGAGTTGGATTAAGAATGAAATCGTAC
CTGCCACTTGGTATTCGTGGTGTCTTTGATGGTGTTATTGAGAACATGCATCTGCATTGG
AAACATAGAGAACTTGTTAAGTTAATATCAAAAGAAAAGGTACTTGCTTTCGTTGAAGAA
ACAGCTAGACTTTTGGAATATGAAAGTGGTGGGATTTTAGTGGCAATAGAAAGAGTGCCA
AAAGGTTATGCTCTTATTTTCTACCGTGGGAAGAACTATAGGCGGCCTATCAGCCTCAGG
CCAAGGAACCTTCTGACAAAAGCAAAAGCACTAAAACGTAGAGTGGCACTGCAGCGTTAT
GAGGCTCTCAGTCAGCATATAGCCGAGCTGGAGACGACGATAGAGCAAACGAAAAGTAAA
ATTGTTGATTTTGGTAAGGCGGACATTAATACTAGCAATTTGGAGGCGCTTGATCAGTTC
AATCATGTCTCGGAATCCCTAAGTGAAGATGAAGATTCATCTTTAGAGTCTGGTGATGAC
GAGGATGAAGATCCTGAATGGGAAAATGATGACGATTCAGAGTACTCCAGTCTTGAGGAC
AATGACACAGGATAA