Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014573
CDS Infomation

pacid=37459537 polypeptide=PGSC0003DMP400010076 locus=PGSC0003DMG400005705 ID=PGSC0003DMT400014573.v4.03 annot-version=v4.03
Sequence

ATGTACCCTTCGAGCCCCAATATTTCCAGCTCTTCATCTTTCTTTCACATTAATATTCCA
TCTCCTTCTATGCAATATGAACCGGAATTCATCCAATATTTCCATGACTTTCAATTCATC
CAACCTGCAGCTTACGATCAGAATAATTTGGATACCAATATTACGGCAGAAGAAGGTGAT
CATAAGATGGAAGAAGATGAATTGATCATGAAAAGCTGCAAGAACAAGAAGGATGAGAGT
ACTAGTACCACTACTACTATTCGTAGGAAAAACAACAAGAGAACTACGAGTGGTACTGGT
GTAGGACCTTCGAAGAAAGATAGACACAGCAAAATAAACACGGCACATGGCCCAAGAGAC
CGAAGAATGAGACTTTCACTTGAAATTGCTAGAAAATTCTTCAATTTGCAAGACTTGCTT
GGGTTCGATAAGGCTAGCAAAACTGTAGAATGGCTACTCACAAAGTCAAAATCAGCTGTA
AACGATCTCGTTCAGAAAATTAGCAAAGGAAAATGCAGCGCTAGTACAAATCCTAATATT
GGTGTTGTATCATCTCCCTCCGAGTCATGTGAAGTCATATCTGGAGTAATCGACGAATCA
GCAGCAACTAATAATACTCACAAGCAACAGAAGAAAAAAAAGTCGATTCGTAGGGCAATA
TTTCATCCAGTTGTTGCAAAGGAATCAAGGACAGAAGCAAGGGCAAGGGCAAGGGAAAGA
ACAAAAATAAAGAAAAGCCTAAATAATAATAATGGTGATCAATCCATGGCGCCTGATGAG
GATTTAACAAGATCATTAGGATCTTGGAGTACTACATTTGAAGATCATCAATCAGGTATT
CAAGCCTATAATAATACTAACAATATTATGAATGCTGTTGATAACTTTAATTTGGTGGAT
ACTAGCAATTGGAGCCCATTTATGTTCAACTATCACCAAATCAATACTGAAATTTCTCAG
GAGCATCAATTGACAAACTTCCAGTATCCTGGCAAGTTATGGGAAGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400010076
PEP Infomation

pacid=37459537 transcript=PGSC0003DMT400014573 locus=PGSC0003DMG400005705 ID=PGSC0003DMT400014573.v4.03 annot-version=v4.03
Sequence

MYPSSPNISSSSSFFHINIPSPSMQYEPEFIQYFHDFQFIQPAAYDQNNLDTNITAEEGD
HKMEEDELIMKSCKNKKDESTSTTTTIRRKNNKRTTSGTGVGPSKKDRHSKINTAHGPRD
RRMRLSLEIARKFFNLQDLLGFDKASKTVEWLLTKSKSAVNDLVQKISKGKCSASTNPNI
GVVSSPSESCEVISGVIDESAATNNTHKQQKKKKSIRRAIFHPVVAKESRTEARARARER
TKIKKSLNNNNGDQSMAPDEDLTRSLGSWSTTFEDHQSGIQAYNNTNNIMNAVDNFNLVD
TSNWSPFMFNYHQINTEISQEHQLTNFQYPGKLWEA*

Transcript Sequence

Transcript ID

PGSC0003DMT400014573
Transcript Infomation

pacid=37459537 locus=PGSC0003DMG400005705 ID=PGSC0003DMT400014573.v4.03 annot-version=v4.03
Sequence

ATGTACCCTTCGAGCCCCAATATTTCCAGCTCTTCATCTTTCTTTCACATTAATATTCCA
TCTCCTTCTATGCAATATGAACCGGAATTCATCCAATATTTCCATGACTTTCAATTCATC
CAACCTGCAGCTTACGATCAGAATAATTTGGATACCAATATTACGGCAGAAGAAGGTGAT
CATAAGATGGAAGAAGATGAATTGATCATGAAAAGCTGCAAGAACAAGAAGGATGAGAGT
ACTAGTACCACTACTACTATTCGTAGGAAAAACAACAAGAGAACTACGAGTGGTACTGGT
GTAGGACCTTCGAAGAAAGATAGACACAGCAAAATAAACACGGCACATGGCCCAAGAGAC
CGAAGAATGAGACTTTCACTTGAAATTGCTAGAAAATTCTTCAATTTGCAAGACTTGCTT
GGGTTCGATAAGGCTAGCAAAACTGTAGAATGGCTACTCACAAAGTCAAAATCAGCTGTA
AACGATCTCGTTCAGAAAATTAGCAAAGGAAAATGCAGCGCTAGTACAAATCCTAATATT
GGTGTTGTATCATCTCCCTCCGAGTCATGTGAAGTCATATCTGGAGTAATCGACGAATCA
GCAGCAACTAATAATACTCACAAGCAACAGAAGAAAAAAAAGTCGATTCGTAGGGCAATA
TTTCATCCAGTTGTTGCAAAGGAATCAAGGACAGAAGCAAGGGCAAGGGCAAGGGAAAGA
ACAAAAATAAAGAAAAGCCTAAATAATAATAATGGTGATCAATCCATGGCGCCTGATGAG
GATTTAACAAGATCATTAGGATCTTGGAGTACTACATTTGAAGATCATCAATCAGGTATT
CAAGCCTATAATAATACTAACAATATTATGAATGCTGTTGATAACTTTAATTTGGTGGAT
ACTAGCAATTGGAGCCCATTTATGTTCAACTATCACCAAATCAATACTGAAATTTCTCAG
GAGCATCAATTGACAAACTTCCAGTATCCTGGCAAGTTATGGGAAGCTTAA