Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014491
CDS Infomation

pacid=37459417 polypeptide=PGSC0003DMP400010012 locus=PGSC0003DMG400005676 ID=PGSC0003DMT400014491.v4.03 annot-version=v4.03
Sequence

ATGGAGCTTGATGAAAAGAAAATCTGTAGAAGTGAGGCATGGCAGCGGCAGATTATCATT
GCCAGTAGGCAAAAACGGCCTGCTAGCTTTGGATTCTATTCACCAGCAAGAGATGGGGCC
AAACTAGAAGGAAGTATTTATACAAAAAGGAAGAGGCTCTCACGCGTGGTTAGTATTGAG
ACTGAAGAACAGAACACTTCCATTTGCTCCGATATAGAATCTGTGTCTGTTGATATCGAC
AATCAAAGCAAGGAGGAGAATGCCATTTCTGATGAGGAAGCTGAAATAGTTGAGTTGATG
AACCGAATTGAAAATATGAAGAAGGAAAGATCTGATGAATGGCTGCAGGAGTTCAAAGAT
TGGATAAATGACTCTTCTGACAATTTTATTGGAGTTGCTAGAGGCAAAGAGACTATTTCC
AGTAACCACAGAGATGATAAAGTTAAGAACCAGACTAGAAACAAACAGCTAGGTAGGACC
TCAAAATATGTATCCGACTCAATGCTGGCTTCTGGAGATGACAGCAGCACAAATATACTA
GAATCTGACAATTCATTTGCAGAGACGTCCACTAATATCAGTATGTTTCATTACCCTAAC
CAAATTGGTGAAGCAGCTTCCATATTTCCTTGCAAATGCACTGGAAACTCCATTCAGATT
ACTAGAAGCCGACGTCAGGATAATTTTAGCCCTCTAAATAATGAAGTGCTTCTACATCCA
AATACGATGTTCCCTCAGTCTGAATCCTTCTCAACCCAAAGGGGTTTTAAAATGAGTGCT
AAAATCAATATTCCACCCGCTACTGATGCTAGTAATATTTTGGATTCTCGATCATCCTTG
GCTAGCACAGGATCACCTCCTCACTACAAGGAGGACATTCTGCACAGACGCCAAAATTTG
GAAGAAGAACTCCTGCAGATGTCTGCTGACTCCTTCTCAGTTGCATCTTCTGATAGTGAT
ACAAGCTGTAGTGACGATGACTGCCCTGATTTGACCTCAATGCATCTGGTTGATAAGTCT
CTTATCGACAATGTCTCAGAAATGAGTGGGGAAAGCCGCTCACCAGTGCTTCTGTCCATG
GATGTATGCCATGAATTGTATCCGATAAAAATAAATTGTAGATTCCCAGCACGTTTAGGC
ACTGAGGGAACCTCTGGTTGCATGGTGGTCAGAGAATCAGGCACTTCCTCCCAGCAAGGG
CATTTTTCTACTGACAATATAAGTGTAGAAAGTGTACAAGTTGTGAAGCAGGACGCTGAT
TGGTTGGAAAAGAAAAAACGTCGTAGGAAACCTGCAAGGAGAATAATCTCATTGTGTGAC
GAACATAAAGAAGCAGAACCTAAAAAATCAAATGTGGATACAAATGGTTTTCAAGACAGA
GGGGTTGGAACATTTAGCCAAAGTGAGATGAGAAAATCCCTTGATAGTTGTGGGGCTGAG
GAGCTAATTAAGAATTACTTTAACAACAAAGCTGCTGATTCTGGAATTGATGAATCTTGT
CAGAGATACATTTTATGCAACTGTTTGCTTGAAAAGGACTCTCAGTTCAGTGAAAGCGAG
GTAGCTGTAACCTTGAGCAGTGAGCATAAGTTACATGTGCTACTCATTGAAAACTCATGT
GATGGGTCAGGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400010012
PEP Infomation

pacid=37459417 transcript=PGSC0003DMT400014491 locus=PGSC0003DMG400005676 ID=PGSC0003DMT400014491.v4.03 annot-version=v4.03
Sequence

MELDEKKICRSEAWQRQIIIASRQKRPASFGFYSPARDGAKLEGSIYTKRKRLSRVVSIE
TEEQNTSICSDIESVSVDIDNQSKEENAISDEEAEIVELMNRIENMKKERSDEWLQEFKD
WINDSSDNFIGVARGKETISSNHRDDKVKNQTRNKQLGRTSKYVSDSMLASGDDSSTNIL
ESDNSFAETSTNISMFHYPNQIGEAASIFPCKCTGNSIQITRSRRQDNFSPLNNEVLLHP
NTMFPQSESFSTQRGFKMSAKINIPPATDASNILDSRSSLASTGSPPHYKEDILHRRQNL
EEELLQMSADSFSVASSDSDTSCSDDDCPDLTSMHLVDKSLIDNVSEMSGESRSPVLLSM
DVCHELYPIKINCRFPARLGTEGTSGCMVVRESGTSSQQGHFSTDNISVESVQVVKQDAD
WLEKKKRRRKPARRIISLCDEHKEAEPKKSNVDTNGFQDRGVGTFSQSEMRKSLDSCGAE
ELIKNYFNNKAADSGIDESCQRYILCNCLLEKDSQFSESEVAVTLSSEHKLHVLLIENSC
DGSG*

Transcript Sequence

Transcript ID

PGSC0003DMT400014491
Transcript Infomation

pacid=37459417 locus=PGSC0003DMG400005676 ID=PGSC0003DMT400014491.v4.03 annot-version=v4.03
Sequence

ATGGAGCTTGATGAAAAGAAAATCTGTAGAAGTGAGGCATGGCAGCGGCAGATTATCATT
GCCAGTAGGCAAAAACGGCCTGCTAGCTTTGGATTCTATTCACCAGCAAGAGATGGGGCC
AAACTAGAAGGAAGTATTTATACAAAAAGGAAGAGGCTCTCACGCGTGGTTAGTATTGAG
ACTGAAGAACAGAACACTTCCATTTGCTCCGATATAGAATCTGTGTCTGTTGATATCGAC
AATCAAAGCAAGGAGGAGAATGCCATTTCTGATGAGGAAGCTGAAATAGTTGAGTTGATG
AACCGAATTGAAAATATGAAGAAGGAAAGATCTGATGAATGGCTGCAGGAGTTCAAAGAT
TGGATAAATGACTCTTCTGACAATTTTATTGGAGTTGCTAGAGGCAAAGAGACTATTTCC
AGTAACCACAGAGATGATAAAGTTAAGAACCAGACTAGAAACAAACAGCTAGGTAGGACC
TCAAAATATGTATCCGACTCAATGCTGGCTTCTGGAGATGACAGCAGCACAAATATACTA
GAATCTGACAATTCATTTGCAGAGACGTCCACTAATATCAGTATGTTTCATTACCCTAAC
CAAATTGGTGAAGCAGCTTCCATATTTCCTTGCAAATGCACTGGAAACTCCATTCAGATT
ACTAGAAGCCGACGTCAGGATAATTTTAGCCCTCTAAATAATGAAGTGCTTCTACATCCA
AATACGATGTTCCCTCAGTCTGAATCCTTCTCAACCCAAAGGGGTTTTAAAATGAGTGCT
AAAATCAATATTCCACCCGCTACTGATGCTAGTAATATTTTGGATTCTCGATCATCCTTG
GCTAGCACAGGATCACCTCCTCACTACAAGGAGGACATTCTGCACAGACGCCAAAATTTG
GAAGAAGAACTCCTGCAGATGTCTGCTGACTCCTTCTCAGTTGCATCTTCTGATAGTGAT
ACAAGCTGTAGTGACGATGACTGCCCTGATTTGACCTCAATGCATCTGGTTGATAAGTCT
CTTATCGACAATGTCTCAGAAATGAGTGGGGAAAGCCGCTCACCAGTGCTTCTGTCCATG
GATGTATGCCATGAATTGTATCCGATAAAAATAAATTGTAGATTCCCAGCACGTTTAGGC
ACTGAGGGAACCTCTGGTTGCATGGTGGTCAGAGAATCAGGCACTTCCTCCCAGCAAGGG
CATTTTTCTACTGACAATATAAGTGTAGAAAGTGTACAAGTTGTGAAGCAGGACGCTGAT
TGGTTGGAAAAGAAAAAACGTCGTAGGAAACCTGCAAGGAGAATAATCTCATTGTGTGAC
GAACATAAAGAAGCAGAACCTAAAAAATCAAATGTGGATACAAATGGTTTTCAAGACAGA
GGGGTTGGAACATTTAGCCAAAGTGAGATGAGAAAATCCCTTGATAGTTGTGGGGCTGAG
GAGCTAATTAAGAATTACTTTAACAACAAAGCTGCTGATTCTGGAATTGATGAATCTTGT
CAGAGATACATTTTATGCAACTGTTTGCTTGAAAAGGACTCTCAGTTCAGTGAAAGCGAG
GTAGCTGTAACCTTGAGCAGTGAGCATAAGTTACATGTGCTACTCATTGAAAACTCATGT
GATGGGTCAGGTTAG