Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014442
CDS Infomation

pacid=37461484 polypeptide=PGSC0003DMP400009976 locus=PGSC0003DMG400005666 ID=PGSC0003DMT400014442.v4.03 annot-version=v4.03
Sequence

ATGGATCCTCCACCTATTCCATCCCATATCACTGCCACTCCAATAGTTACCATTGCCCAA
CAAAACTACTCAGATTCTGCCAGCTCTTCACCGCGCTCCCGGCAAAATGATACATGGGAT
CAGGAGTCATTGGCACTAGTCCCTGGTGCCAAACTCCGCCTCATATGCAGCTATGGTGGT
CACATTATTCCTCGTCCCCACGATAAGTCCCTCTGCTATGTTGGTGGTGACACGCGCATT
GTGGTTGCTGAGCGTCAGTCATCCCTCGCTGATCTTCAATCTCGCCTTTCCCATACTCTC
CTCAATGGGCGCGGATTTTCCCTAAAGTATCAGCTCCCTAATGAAGAACTTGATTCCCTT
GTATCTGTCACAACTGATGAAGACTTGGATAACATGATTGAAGAATATGATCGTGCAATG
TCAGCTTCCCCTTTGAAACCATCTCGTCTTCGTTTGTTCCTTTTTCTTGCCAAACCTGAA
ACTGCAGCCTCTATGGGTTGCCTCCTTGCTGATTCTAAATCTGAAACGTGGTTTGTTGAT
GCTCTTAACAATGCTAGCTTGCTTTCTAGAGGACTTTCGGATTCAGCTGCAGAGGGTAAT
TTTCTGGAGCTTGAAAGGATTCCCAAAAGTGATTCTGGTGTAAACCTGGATCAGGCTCAG
AATGAGTCCTTGGCTGCAAATAATCGGCAAATGGCAAAGAATGTAATCCAAGAAGTGCAA
TCCACTATGCCTGATTCACCAATGGTTGAAACAACCTCATCATTTGAATCAAGTGTTTCA
TCCCCATCTATGCCAAATTTGCCTCAAATTAAGGTTAGACCTGAAGATGGTCAAATGAAT
GCAAGATTCCATGATCAGATGCTCGGGTTAGATGAGCAGTTTTCACACATGAATGTAGCT
TCAAATGCACAAAATCTGGATGATGGTTACCTTCATTTGGCTGCACAAGCTGCAACGCCA
CCTCTTCCTACTGTAATTGGTGGTGCAGCCGTTATGTCATCAGCTACCTTGGTGAACGCT
GCACCAGCTACAGGGGAACATCATGGCCGGGTTATCTCAGATGATGAGAAATCAGATCAT
GGTGCACCCTCTGGACGCCGAAAGCCTCCATTGCCTTTACAGCCTATTCAGCGGAAAGTT
GGAGATGGTTATAGCTTGCCATCACCTGATTCAAAGCATGCTGGAGGTTACAACTTGCAA
TCACCTGATTCTGTAGCAAGTGATAGCAGCATCGCATCAGGTACATCCTTCTCGAAACAC
ACGGTTTACCAAGATGCACCTCCAGCAACAGGTCGCGAGACCAGAATGCATCCAGCTGTT
ATGGACTATAACTCTCAAATTCAGATGCAGCAAGTTCAAGATTCTGTAGTTATGCAAGTT
CCACAGCAAAATCAGCAGCAGCAACAGCAGTTCGTTCCTGCCAATGCACATTACATCCAA
CATACTGCAACAGGTCCAGTGGCAGTCCCGTCTTATTATCAAATGTATGCACCCCCAACC
CAGCAACCACTTCATCAACAAATGGATCAGCAGTATCAAATGTATTATGTGCCAGTACCT
CAGACTCAACAGTATAATTTGACAGTGCAATCTAATATAGCTGATTCTAGTGCTGTAGCT
TCGAACCAGCAGCTAACACCACCAAATCCAACAACGGTTTCATCCTCAGCAGCGTTTAAA
GAAGCTCTCCCACCTATTTATCCAGCAAGGACAATCCAGTCCTCTAAGACTGAAATGCCT
GCCAATGTATACATAACAGCTACCCCAGCAAATCAAACAGTAGTTCAAGTTCCTTCAAGT
CAATATCATCAACAGTATTACGGCCTATCCCAGGTTCCTCCTCCATCACAGCAAATGGCT
ACTGTTCCTAATAGCGCTGCTAATTATGGCTATGAATATTCTCATCCTGTGCATGACCAG
GTGTTCTATGCCCAACAAACAGCTCCAACACTTCCTTCTCAGTACCAAACTATGACCCCT
AACACTGCAGTTTTACTATCACAGGCTACAGCACAGCTAGCTGCGGAGAATACCACAACT
CAGAACAGGACTTCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400009976
PEP Infomation

pacid=37461484 transcript=PGSC0003DMT400014442 locus=PGSC0003DMG400005666 ID=PGSC0003DMT400014442.v4.03 annot-version=v4.03
Sequence

MDPPPIPSHITATPIVTIAQQNYSDSASSSPRSRQNDTWDQESLALVPGAKLRLICSYGG
HIIPRPHDKSLCYVGGDTRIVVAERQSSLADLQSRLSHTLLNGRGFSLKYQLPNEELDSL
VSVTTDEDLDNMIEEYDRAMSASPLKPSRLRLFLFLAKPETAASMGCLLADSKSETWFVD
ALNNASLLSRGLSDSAAEGNFLELERIPKSDSGVNLDQAQNESLAANNRQMAKNVIQEVQ
STMPDSPMVETTSSFESSVSSPSMPNLPQIKVRPEDGQMNARFHDQMLGLDEQFSHMNVA
SNAQNLDDGYLHLAAQAATPPLPTVIGGAAVMSSATLVNAAPATGEHHGRVISDDEKSDH
GAPSGRRKPPLPLQPIQRKVGDGYSLPSPDSKHAGGYNLQSPDSVASDSSIASGTSFSKH
TVYQDAPPATGRETRMHPAVMDYNSQIQMQQVQDSVVMQVPQQNQQQQQQFVPANAHYIQ
HTATGPVAVPSYYQMYAPPTQQPLHQQMDQQYQMYYVPVPQTQQYNLTVQSNIADSSAVA
SNQQLTPPNPTTVSSSAAFKEALPPIYPARTIQSSKTEMPANVYITATPANQTVVQVPSS
QYHQQYYGLSQVPPPSQQMATVPNSAANYGYEYSHPVHDQVFYAQQTAPTLPSQYQTMTP
NTAVLLSQATAQLAAENTTTQNRTS*

Transcript Sequence

Transcript ID

PGSC0003DMT400014442
Transcript Infomation

pacid=37461484 locus=PGSC0003DMG400005666 ID=PGSC0003DMT400014442.v4.03 annot-version=v4.03
Sequence

ATGGATCCTCCACCTATTCCATCCCATATCACTGCCACTCCAATAGTTACCATTGCCCAA
CAAAACTACTCAGATTCTGCCAGCTCTTCACCGCGCTCCCGGCAAAATGATACATGGGAT
CAGGAGTCATTGGCACTAGTCCCTGGTGCCAAACTCCGCCTCATATGCAGCTATGGTGGT
CACATTATTCCTCGTCCCCACGATAAGTCCCTCTGCTATGTTGGTGGTGACACGCGCATT
GTGGTTGCTGAGCGTCAGTCATCCCTCGCTGATCTTCAATCTCGCCTTTCCCATACTCTC
CTCAATGGGCGCGGATTTTCCCTAAAGTATCAGCTCCCTAATGAAGAACTTGATTCCCTT
GTATCTGTCACAACTGATGAAGACTTGGATAACATGATTGAAGAATATGATCGTGCAATG
TCAGCTTCCCCTTTGAAACCATCTCGTCTTCGTTTGTTCCTTTTTCTTGCCAAACCTGAA
ACTGCAGCCTCTATGGGTTGCCTCCTTGCTGATTCTAAATCTGAAACGTGGTTTGTTGAT
GCTCTTAACAATGCTAGCTTGCTTTCTAGAGGACTTTCGGATTCAGCTGCAGAGGGTAAT
TTTCTGGAGCTTGAAAGGATTCCCAAAAGTGATTCTGGTGTAAACCTGGATCAGGCTCAG
AATGAGTCCTTGGCTGCAAATAATCGGCAAATGGCAAAGAATGTAATCCAAGAAGTGCAA
TCCACTATGCCTGATTCACCAATGGTTGAAACAACCTCATCATTTGAATCAAGTGTTTCA
TCCCCATCTATGCCAAATTTGCCTCAAATTAAGGTTAGACCTGAAGATGGTCAAATGAAT
GCAAGATTCCATGATCAGATGCTCGGGTTAGATGAGCAGTTTTCACACATGAATGTAGCT
TCAAATGCACAAAATCTGGATGATGGTTACCTTCATTTGGCTGCACAAGCTGCAACGCCA
CCTCTTCCTACTGTAATTGGTGGTGCAGCCGTTATGTCATCAGCTACCTTGGTGAACGCT
GCACCAGCTACAGGGGAACATCATGGCCGGGTTATCTCAGATGATGAGAAATCAGATCAT
GGTGCACCCTCTGGACGCCGAAAGCCTCCATTGCCTTTACAGCCTATTCAGCGGAAAGTT
GGAGATGGTTATAGCTTGCCATCACCTGATTCAAAGCATGCTGGAGGTTACAACTTGCAA
TCACCTGATTCTGTAGCAAGTGATAGCAGCATCGCATCAGGTACATCCTTCTCGAAACAC
ACGGTTTACCAAGATGCACCTCCAGCAACAGGTCGCGAGACCAGAATGCATCCAGCTGTT
ATGGACTATAACTCTCAAATTCAGATGCAGCAAGTTCAAGATTCTGTAGTTATGCAAGTT
CCACAGCAAAATCAGCAGCAGCAACAGCAGTTCGTTCCTGCCAATGCACATTACATCCAA
CATACTGCAACAGGTCCAGTGGCAGTCCCGTCTTATTATCAAATGTATGCACCCCCAACC
CAGCAACCACTTCATCAACAAATGGATCAGCAGTATCAAATGTATTATGTGCCAGTACCT
CAGACTCAACAGTATAATTTGACAGTGCAATCTAATATAGCTGATTCTAGTGCTGTAGCT
TCGAACCAGCAGCTAACACCACCAAATCCAACAACGGTTTCATCCTCAGCAGCGTTTAAA
GAAGCTCTCCCACCTATTTATCCAGCAAGGACAATCCAGTCCTCTAAGACTGAAATGCCT
GCCAATGTATACATAACAGCTACCCCAGCAAATCAAACAGTAGTTCAAGTTCCTTCAAGT
CAATATCATCAACAGTATTACGGCCTATCCCAGGTTCCTCCTCCATCACAGCAAATGGCT
ACTGTTCCTAATAGCGCTGCTAATTATGGCTATGAATATTCTCATCCTGTGCATGACCAG
GTGTTCTATGCCCAACAAACAGCTCCAACACTTCCTTCTCAGTACCAAACTATGACCCCT
AACACTGCAGTTTTACTATCACAGGCTACAGCACAGCTAGCTGCGGAGAATACCACAACT
CAGAACAGGACTTCATAG