Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014441
CDS Infomation

pacid=37459456 polypeptide=PGSC0003DMP400009975 locus=PGSC0003DMG400005665 ID=PGSC0003DMT400014441.v4.03 annot-version=v4.03
Sequence

ATGGCATCTCCGGCAGGAGTTTCGGCGCCGCGCTCCGCTGCTTCATCGTCCAAAACTGAG
ACCTTTGTGGACAACAAGCGCAAAGATGATATCCGCATGGCGAATATTGCCGCCGCACAG
GCTGTGGCTAATGCCGTTCGTACTAGTCTTGGACCTAAAGGTATGGACAAAATGATCTCT
ACTGCAAACGGAGAGGTCATTATCACCAATGATGGAGCTACTATTCTTAACAAAATGGAG
GTTCTTCAACCCGCTGCTAAGTTTCTCGTTGAGTTATCTAAGTCTCAAGATGTTGTTGCC
GGAGATGGAACTACTACCGTTGTTGTTATTGCCGGTGCATTGCTCAAACAATGTCTTTCT
CTTCTTTCCGCTGGTATTCACCCCACTGTCATTTCCGATTCTCTGCATAAGGTATCTACA
AAGGCTGTTGAAGTTCTCACTGCGATGGCTCTTCCTGTTGAGCTCACTGACCGTGATTCC
CTTGTGAAATCAGCAAGCACTGCGCTTAACAGTAAGGTAGTGTCACAATACTCCACTCTT
TTGGCTCCTTTAGCTGTTGATTCTGTGCTTTCTGTTGTGGATCCCGAAAAGCCAGAGATT
GTCGATCTAAGGGATATTAAAATTGTCAAGAAATTGGGAGGTACTGTTGATGATACCGAG
TTGGTTAAGGGTTTAGTTTTTGACAAGAAGGTGAGTCATGCCTCAGGTGGTCTCACACGA
GTTGAGAAAGCTAAGATTGGGGTGATTCAGTTTCAGATTTCCCCTCCCAAGACTGATATT
GAGCAGAGCATTGTGGTTTCTGATTATACTCAAATGGACAGGATTTTGAAAGAAGAGAGG
AACTACATTCTGGGCATGATTAAGAAGATCAAAGCAACTGGCTGTAATGTTTTGTTGATT
CAGAAGAGTATTCTGAGGGACGCTGTGACGGAATTGTCTCTGCATTATTTGTCAAAGGCG
AAGATTTTGGTGATTAAAGATGTTGAGAGGGATGAGATTGAGTTTATTACTAAGACCTTA
AATTGTCTGCCTATTGCCAATATTGATCATTTCCGAGCAGAGAAACTCGGCCATGCAGAT
TTGGTTGAAGAGATATCTCTTGGGGATGGTGGAAAGATTGTGAAGATCACAGGGATCCAG
GACATGGGCAGGACCACTTCAGTGCTGGTTCGTGGGTCAAATCAGTTGGTCCTTGATGAG
GCTGAGAGAAGTTTGCATGATGCATTGTGTGTGGTAAGATGTTTGGTGAACAAGAGGTTC
TTGATTGCAGGAGGTGGGGCACCTGAGATTGAGCTCTCTAGGCAGTTGGGTGCATGGGCA
AAGGTTTTACAGGGGATGGAAGGGTATTGTGTGAGGTCATTTGCTGAAGCCCTCGAAGTC
ATTCCCTATACTTTGGCTGAGAATGCTGGGTTGAACCCAATTGCAATTGTGACTGAGTTG
AGGAACAGGCACGCTCAGGGCGAGATCAACACAGGGATCAATGTGAGGAAGGGGCAGATC
ACCAACATATTGGAAGAGAATGTCGTGCAGCCATTGTTGGTGAGCACAAGTGCAATTACC
TTGGCTACTGAATGCGTACGAATGATTTTGAAGATTGATGACATTGTTACTGTGAGGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400009975
PEP Infomation

pacid=37459456 transcript=PGSC0003DMT400014441 locus=PGSC0003DMG400005665 ID=PGSC0003DMT400014441.v4.03 annot-version=v4.03
Sequence

MASPAGVSAPRSAASSSKTETFVDNKRKDDIRMANIAAAQAVANAVRTSLGPKGMDKMIS
TANGEVIITNDGATILNKMEVLQPAAKFLVELSKSQDVVAGDGTTTVVVIAGALLKQCLS
LLSAGIHPTVISDSLHKVSTKAVEVLTAMALPVELTDRDSLVKSASTALNSKVVSQYSTL
LAPLAVDSVLSVVDPEKPEIVDLRDIKIVKKLGGTVDDTELVKGLVFDKKVSHASGGLTR
VEKAKIGVIQFQISPPKTDIEQSIVVSDYTQMDRILKEERNYILGMIKKIKATGCNVLLI
QKSILRDAVTELSLHYLSKAKILVIKDVERDEIEFITKTLNCLPIANIDHFRAEKLGHAD
LVEEISLGDGGKIVKITGIQDMGRTTSVLVRGSNQLVLDEAERSLHDALCVVRCLVNKRF
LIAGGGAPEIELSRQLGAWAKVLQGMEGYCVRSFAEALEVIPYTLAENAGLNPIAIVTEL
RNRHAQGEINTGINVRKGQITNILEENVVQPLLVSTSAITLATECVRMILKIDDIVTVR*

Transcript Sequence

Transcript ID

PGSC0003DMT400014441
Transcript Infomation

pacid=37459456 locus=PGSC0003DMG400005665 ID=PGSC0003DMT400014441.v4.03 annot-version=v4.03
Sequence

ATGGCATCTCCGGCAGGAGTTTCGGCGCCGCGCTCCGCTGCTTCATCGTCCAAAACTGAG
ACCTTTGTGGACAACAAGCGCAAAGATGATATCCGCATGGCGAATATTGCCGCCGCACAG
GCTGTGGCTAATGCCGTTCGTACTAGTCTTGGACCTAAAGGTATGGACAAAATGATCTCT
ACTGCAAACGGAGAGGTCATTATCACCAATGATGGAGCTACTATTCTTAACAAAATGGAG
GTTCTTCAACCCGCTGCTAAGTTTCTCGTTGAGTTATCTAAGTCTCAAGATGTTGTTGCC
GGAGATGGAACTACTACCGTTGTTGTTATTGCCGGTGCATTGCTCAAACAATGTCTTTCT
CTTCTTTCCGCTGGTATTCACCCCACTGTCATTTCCGATTCTCTGCATAAGGTATCTACA
AAGGCTGTTGAAGTTCTCACTGCGATGGCTCTTCCTGTTGAGCTCACTGACCGTGATTCC
CTTGTGAAATCAGCAAGCACTGCGCTTAACAGTAAGGTAGTGTCACAATACTCCACTCTT
TTGGCTCCTTTAGCTGTTGATTCTGTGCTTTCTGTTGTGGATCCCGAAAAGCCAGAGATT
GTCGATCTAAGGGATATTAAAATTGTCAAGAAATTGGGAGGTACTGTTGATGATACCGAG
TTGGTTAAGGGTTTAGTTTTTGACAAGAAGGTGAGTCATGCCTCAGGTGGTCTCACACGA
GTTGAGAAAGCTAAGATTGGGGTGATTCAGTTTCAGATTTCCCCTCCCAAGACTGATATT
GAGCAGAGCATTGTGGTTTCTGATTATACTCAAATGGACAGGATTTTGAAAGAAGAGAGG
AACTACATTCTGGGCATGATTAAGAAGATCAAAGCAACTGGCTGTAATGTTTTGTTGATT
CAGAAGAGTATTCTGAGGGACGCTGTGACGGAATTGTCTCTGCATTATTTGTCAAAGGCG
AAGATTTTGGTGATTAAAGATGTTGAGAGGGATGAGATTGAGTTTATTACTAAGACCTTA
AATTGTCTGCCTATTGCCAATATTGATCATTTCCGAGCAGAGAAACTCGGCCATGCAGAT
TTGGTTGAAGAGATATCTCTTGGGGATGGTGGAAAGATTGTGAAGATCACAGGGATCCAG
GACATGGGCAGGACCACTTCAGTGCTGGTTCGTGGGTCAAATCAGTTGGTCCTTGATGAG
GCTGAGAGAAGTTTGCATGATGCATTGTGTGTGGTAAGATGTTTGGTGAACAAGAGGTTC
TTGATTGCAGGAGGTGGGGCACCTGAGATTGAGCTCTCTAGGCAGTTGGGTGCATGGGCA
AAGGTTTTACAGGGGATGGAAGGGTATTGTGTGAGGTCATTTGCTGAAGCCCTCGAAGTC
ATTCCCTATACTTTGGCTGAGAATGCTGGGTTGAACCCAATTGCAATTGTGACTGAGTTG
AGGAACAGGCACGCTCAGGGCGAGATCAACACAGGGATCAATGTGAGGAAGGGGCAGATC
ACCAACATATTGGAAGAGAATGTCGTGCAGCCATTGTTGGTGAGCACAAGTGCAATTACC
TTGGCTACTGAATGCGTACGAATGATTTTGAAGATTGATGACATTGTTACTGTGAGGTAG