Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014421
CDS Infomation

pacid=37459769 polypeptide=PGSC0003DMP400009961 locus=PGSC0003DMG402005658 ID=PGSC0003DMT400014421.v4.03 annot-version=v4.03
Sequence

ATGTGGGAATTTTGGAGAAGGCATAAGAGGAAGGTATATGTTACATTTGGAGTTCTTGGA
AGTGGTTACCTTTTGTATAAGCTGTATGAAGGACACAAGCGGCGACTATCTGATCTTGAG
AGGGAACTTGCAGATGAGAGGAGAAATGAGGAACTCATTAGATCCCAGATCAAGGAACAT
TTTGGGAAAATTCAGACAATAGCTGATTCAACGACATTGCCCCATGTAATGCGACATTTA
AGTAGTCGAATAGAAGGAGACTTGGACCTCACGCACTTGATGGAGAGGCTGATGAAAGGG
AAAGACGAGCCAAATTCTCTAACTGCTGCAGAGAAGCTGGAGCTGTGGGACAGACTCAAA
ATTTTAAATTTTACCAGAATTGTGTTGTCTCTTTGGGCGACCACAATGGTAAGCTTATAC
ATTAGAGTTCAAGTCAACATATTAGGGAGACATCTTTATATCGATACTGCACGTGGCCTT
GGAAGCTCTATTCAACTTGATGAAGCTGATCTAATTGACAGAGATGATGAGCAACAGTTT
CTAGCCAGTGCAGACTATCTTACCAATGTTGGCCTGCCTGCCTTGATTTCATGTTTTGAA
ACTGCAACATCTGAAGTTCTAAAAGGAAAACAGTTGAAGGATTTCTTCAACACAACTGTA
CTTCATGATACCATTCTGCAGATATTGGCCACCTTTCTGAGCATGGGAAGCCCTCATCAC
TGGATGGGCTTTTTGATGCCAGAGCCCTCTAAACTATATAACTCTGCTGCTACCTCTAGC
AGTGATAGTACAGAACCTTCGCCTGCATCCAAATTTGAACAACTTATGCTGGAGGCACAG
GCCGTTTTGTCAAGCTCCGAATTTGAGAATATTCTGGATATGTCACTTAAAACAGCGGTG
GATGTGATGATGGAAGACATAAAGGTCCTCTGTGGAGAAACCAATTTAAAGTTAGGTATT
CCATTAGCTAAACTTCTACCACGACTTGCTCATATGAGTCACATCCTGCTTGAAGAACCC
AATAGGGACAGGTACATCCAAATTGTCCAAAGCATGCCAGAAGTAGAAATGTTCTTCACC
TTGTTATATGCAAGCACACCAGCTTCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400009961
PEP Infomation

pacid=37459769 transcript=PGSC0003DMT400014421 locus=PGSC0003DMG402005658 ID=PGSC0003DMT400014421.v4.03 annot-version=v4.03
Sequence

MWEFWRRHKRKVYVTFGVLGSGYLLYKLYEGHKRRLSDLERELADERRNEELIRSQIKEH
FGKIQTIADSTTLPHVMRHLSSRIEGDLDLTHLMERLMKGKDEPNSLTAAEKLELWDRLK
ILNFTRIVLSLWATTMVSLYIRVQVNILGRHLYIDTARGLGSSIQLDEADLIDRDDEQQF
LASADYLTNVGLPALISCFETATSEVLKGKQLKDFFNTTVLHDTILQILATFLSMGSPHH
WMGFLMPEPSKLYNSAATSSSDSTEPSPASKFEQLMLEAQAVLSSSEFENILDMSLKTAV
DVMMEDIKVLCGETNLKLGIPLAKLLPRLAHMSHILLEEPNRDRYIQIVQSMPEVEMFFT
LLYASTPAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400014421
Transcript Infomation

pacid=37459769 locus=PGSC0003DMG402005658 ID=PGSC0003DMT400014421.v4.03 annot-version=v4.03
Sequence

ATGTGGGAATTTTGGAGAAGGCATAAGAGGAAGGTATATGTTACATTTGGAGTTCTTGGA
AGTGGTTACCTTTTGTATAAGCTGTATGAAGGACACAAGCGGCGACTATCTGATCTTGAG
AGGGAACTTGCAGATGAGAGGAGAAATGAGGAACTCATTAGATCCCAGATCAAGGAACAT
TTTGGGAAAATTCAGACAATAGCTGATTCAACGACATTGCCCCATGTAATGCGACATTTA
AGTAGTCGAATAGAAGGAGACTTGGACCTCACGCACTTGATGGAGAGGCTGATGAAAGGG
AAAGACGAGCCAAATTCTCTAACTGCTGCAGAGAAGCTGGAGCTGTGGGACAGACTCAAA
ATTTTAAATTTTACCAGAATTGTGTTGTCTCTTTGGGCGACCACAATGGTAAGCTTATAC
ATTAGAGTTCAAGTCAACATATTAGGGAGACATCTTTATATCGATACTGCACGTGGCCTT
GGAAGCTCTATTCAACTTGATGAAGCTGATCTAATTGACAGAGATGATGAGCAACAGTTT
CTAGCCAGTGCAGACTATCTTACCAATGTTGGCCTGCCTGCCTTGATTTCATGTTTTGAA
ACTGCAACATCTGAAGTTCTAAAAGGAAAACAGTTGAAGGATTTCTTCAACACAACTGTA
CTTCATGATACCATTCTGCAGATATTGGCCACCTTTCTGAGCATGGGAAGCCCTCATCAC
TGGATGGGCTTTTTGATGCCAGAGCCCTCTAAACTATATAACTCTGCTGCTACCTCTAGC
AGTGATAGTACAGAACCTTCGCCTGCATCCAAATTTGAACAACTTATGCTGGAGGCACAG
GCCGTTTTGTCAAGCTCCGAATTTGAGAATATTCTGGATATGTCACTTAAAACAGCGGTG
GATGTGATGATGGAAGACATAAAGGTCCTCTGTGGAGAAACCAATTTAAAGTTAGGTATT
CCATTAGCTAAACTTCTACCACGACTTGCTCATATGAGTCACATCCTGCTTGAAGAACCC
AATAGGGACAGGTACATCCAAATTGTCCAAAGCATGCCAGAAGTAGAAATGTTCTTCACC
TTGTTATATGCAAGCACACCAGCTTCATAG