Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014415
CDS Infomation

pacid=37459596 polypeptide=PGSC0003DMP400009956 locus=PGSC0003DMG400005656 ID=PGSC0003DMT400014415.v4.03 annot-version=v4.03
Sequence

ATGAAAGCAAATCCTCCATGCCTAATTTTGCTGCTGTTAATTGCAGCTACTGTACTTACC
GTACATTCTGAAAATGATGACGTGTCGCCGGAAAATACCATATTGGACACCGGAGGTTTG
AGTAGAGAAAGTTTTCCGAAGGGATTTATATTCGGAACAGCAACTTCAGCTTACCAAGTA
GAAGGTTCTGCCAGTACTGAAGGCCGCGGACCTAGTATTTGGGACACTTTCCTTAAAATA
CCTGGACTTGAACCAAACAATGCCAATGGAGAAATTGCTGTAGATCAATATCATCGATAC
AAGGAGGATATTGATCTGATGGCGAAGCTCAACTTTGAAGCTTATCGTTTCTCAATTTCG
TGGTCAAGGATTTTCCCAAATGGAACTGGTGAAGTGAACTGGAAGGGAGTTGCTTATTAT
AATAGATTGATCGATTATATGCTCAAAAGAGGTATTACCCCATACGCTAATCTGAATCAC
TATGATTTACCACAAGCACTTCAAGATAGGTACAACGGATGGTTGGGCCGTGAAGTCGTG
AAGGATTTTGCTGATTATGCAGAGTTCTGTTTTAAGACATTCGGAGACAGAGTGAAGAAT
TGGTTCTCGTTTAATGAGCCAAGAGTGGTTGCTGCTTTAGGGTATGATAATGGATTCTTT
GCACCCGGAAGATGTTCAAAGCCTTTTGGAAACTGCACAGAAGGGGATTCTGCTACTGAG
CCTTATATTGTTGCACACAATCTTATCTTATGTCATGCTTCTGCAGCACAGAGATACCGT
GAGAAGTATCAAGAGAAACAGAAAGGGAAGTTTGGCATTCTATTGGATTTTGTGTGGTAC
GAACCTCTGACAAAAGGAAAAGCCGATAACTATGCTGCTCAAAGAGCTAGAGACTTTCAT
TTGGGATGGTTCTTGCATCCTCTTGTATATGGTGAGTACCCAAAAACCATGCAAAATATT
GTGGGAACGCGATTACCCAAGTTCTCGAAAGAAGAGGTTAAGATGGTGAAGGGATCATTT
GATTATGTGGGCATAAACCAGTACACTTCTTACTACATGTATGACCCTCATTATACCACA
CCACAACCCTTGGGCTACCAACAGGACTGGAATGTTGGATTTGCTTATGACCGCAAGGGA
GTACCAATTGGTCCTAGGGCACACTCATATTGGCTCTACATTGTGCCATGGGGTCTATAT
AAAGCTGTCAACTATGTTAAAGAACACTATGGAAATCCTACCATTATTCTAGCAGAAAAT
GGTATGGATTATGCGGGCAACATTACCCTTCCAAAAGCTTTGCATGACACTAAAAGGATC
GACTACTATAAGAGCTATTTGCAACAACTGAAGAAGACAGTGGATGATGGAGCTAATGTC
ATAGGCTACTTCGCGTGGTCATTGCTTGACAACTTTGAATGGAGATTGGGTTATACTTCC
AGATTTGGCATTGTCTATGTTGATTTCAATACCCTCAAACGATACCCGAAGATGTCAGCA
TATTGGTTCAAGAAATTGCTTAAGCGCCAGAAGCATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400009956
PEP Infomation

pacid=37459596 transcript=PGSC0003DMT400014415 locus=PGSC0003DMG400005656 ID=PGSC0003DMT400014415.v4.03 annot-version=v4.03
Sequence

MKANPPCLILLLLIAATVLTVHSENDDVSPENTILDTGGLSRESFPKGFIFGTATSAYQV
EGSASTEGRGPSIWDTFLKIPGLEPNNANGEIAVDQYHRYKEDIDLMAKLNFEAYRFSIS
WSRIFPNGTGEVNWKGVAYYNRLIDYMLKRGITPYANLNHYDLPQALQDRYNGWLGREVV
KDFADYAEFCFKTFGDRVKNWFSFNEPRVVAALGYDNGFFAPGRCSKPFGNCTEGDSATE
PYIVAHNLILCHASAAQRYREKYQEKQKGKFGILLDFVWYEPLTKGKADNYAAQRARDFH
LGWFLHPLVYGEYPKTMQNIVGTRLPKFSKEEVKMVKGSFDYVGINQYTSYYMYDPHYTT
PQPLGYQQDWNVGFAYDRKGVPIGPRAHSYWLYIVPWGLYKAVNYVKEHYGNPTIILAEN
GMDYAGNITLPKALHDTKRIDYYKSYLQQLKKTVDDGANVIGYFAWSLLDNFEWRLGYTS
RFGIVYVDFNTLKRYPKMSAYWFKKLLKRQKH*

Transcript Sequence

Transcript ID

PGSC0003DMT400014415
Transcript Infomation

pacid=37459596 locus=PGSC0003DMG400005656 ID=PGSC0003DMT400014415.v4.03 annot-version=v4.03
Sequence

ATGAAAGCAAATCCTCCATGCCTAATTTTGCTGCTGTTAATTGCAGCTACTGTACTTACC
GTACATTCTGAAAATGATGACGTGTCGCCGGAAAATACCATATTGGACACCGGAGGTTTG
AGTAGAGAAAGTTTTCCGAAGGGATTTATATTCGGAACAGCAACTTCAGCTTACCAAGTA
GAAGGTTCTGCCAGTACTGAAGGCCGCGGACCTAGTATTTGGGACACTTTCCTTAAAATA
CCTGGACTTGAACCAAACAATGCCAATGGAGAAATTGCTGTAGATCAATATCATCGATAC
AAGGAGGATATTGATCTGATGGCGAAGCTCAACTTTGAAGCTTATCGTTTCTCAATTTCG
TGGTCAAGGATTTTCCCAAATGGAACTGGTGAAGTGAACTGGAAGGGAGTTGCTTATTAT
AATAGATTGATCGATTATATGCTCAAAAGAGGTATTACCCCATACGCTAATCTGAATCAC
TATGATTTACCACAAGCACTTCAAGATAGGTACAACGGATGGTTGGGCCGTGAAGTCGTG
AAGGATTTTGCTGATTATGCAGAGTTCTGTTTTAAGACATTCGGAGACAGAGTGAAGAAT
TGGTTCTCGTTTAATGAGCCAAGAGTGGTTGCTGCTTTAGGGTATGATAATGGATTCTTT
GCACCCGGAAGATGTTCAAAGCCTTTTGGAAACTGCACAGAAGGGGATTCTGCTACTGAG
CCTTATATTGTTGCACACAATCTTATCTTATGTCATGCTTCTGCAGCACAGAGATACCGT
GAGAAGTATCAAGAGAAACAGAAAGGGAAGTTTGGCATTCTATTGGATTTTGTGTGGTAC
GAACCTCTGACAAAAGGAAAAGCCGATAACTATGCTGCTCAAAGAGCTAGAGACTTTCAT
TTGGGATGGTTCTTGCATCCTCTTGTATATGGTGAGTACCCAAAAACCATGCAAAATATT
GTGGGAACGCGATTACCCAAGTTCTCGAAAGAAGAGGTTAAGATGGTGAAGGGATCATTT
GATTATGTGGGCATAAACCAGTACACTTCTTACTACATGTATGACCCTCATTATACCACA
CCACAACCCTTGGGCTACCAACAGGACTGGAATGTTGGATTTGCTTATGACCGCAAGGGA
GTACCAATTGGTCCTAGGGCACACTCATATTGGCTCTACATTGTGCCATGGGGTCTATAT
AAAGCTGTCAACTATGTTAAAGAACACTATGGAAATCCTACCATTATTCTAGCAGAAAAT
GGTATGGATTATGCGGGCAACATTACCCTTCCAAAAGCTTTGCATGACACTAAAAGGATC
GACTACTATAAGAGCTATTTGCAACAACTGAAGAAGACAGTGGATGATGGAGCTAATGTC
ATAGGCTACTTCGCGTGGTCATTGCTTGACAACTTTGAATGGAGATTGGGTTATACTTCC
AGATTTGGCATTGTCTATGTTGATTTCAATACCCTCAAACGATACCCGAAGATGTCAGCA
TATTGGTTCAAGAAATTGCTTAAGCGCCAGAAGCATTAA