Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014412
CDS Infomation

pacid=37463710 polypeptide=PGSC0003DMP400009954 locus=PGSC0003DMG400005655 ID=PGSC0003DMT400014412.v4.03 annot-version=v4.03
Sequence

ATGGCTGAACTCAAAGAAACTTACGCTTGTATACCTTCCACTGAACGAGGTCGCGGTATT
CTCATTTCGGGTGACCCGAAATCCAACTCTATCCTTTATTGTAACGGCCGATCCGTTATT
ATCCGGTACCTCGATCGCCCCCTCCAAGTTGCAGTTTACGGGGAGCATGCTTATCAGGCT
ACAGTCGCTCGTTATTCTCCTAATGGTGAGTGGATCGCTTCTGCTGACGTTTCAGGTACT
GTTCGGATCTGGGGGACCCATAATGACTTCGTTCTTAAGAAAGAGTTTCGAGTCCTATCG
GGTCGGATCGATGACCTTCAATGGTCTCCTGATGGAATGCGCATTGTTGCTTGTGGTGAT
GGCAAGGGCAAATCACTTGTTCGTGCCTTCATGTGGGACTCGGGAACAAATGTGGGTGAA
TTTGATGGCCATTCAAGGAGAGTTTTGAGTTGCGCTTTTAAACCCACAAGACCATTTCGC
ATAGCCACGTGCGGTGAAGACTTCTTGATGAACTTTTATGAAGGACCACCATTTAAATTC
AAGCTGTCTCACAGGGAGCATTCAAATTTTGTCAATTGTTTGAGGTTCTCTCCAGACGGA
AGCAAACTTATCAGTGTAAGCTCTGACAAGAAGGGCATTATTTATGATGCCAAAACAGGA
GATATAATTGGAGAGCTGTCATCTGAGGATGGTCATCAGGGAAGTATATATGCTGTTAGT
TGGAGTCCTGATAGTAAACAGGTGCTCACAGTCGCTGCTGATAAGTCAGCAAAAATATGG
GATATATCTGATGATGGAAAAGGGAAAGTGAAGAAAACACTGGCTTCTCCTGGTTCTGGT
GGAGTTGAGGACATGCTAGTTGGCTGTCTCTGGCAAAATGACCATCTTGTTACTGTTTCT
CTTGGTGGAACTATTTCCATATTCTCAGCAAGTGATCTGGAAAAATCTCCGGTGTCATTT
TCTGGACACATGAAAAATGTTAATTCCTTAGCTGTCCTCAGAAGTGACCCGAAAATCATA
TTGTCCACCAGTTATGATGGTTTGATTGTTAAATGGATTCAAGGCATTGGATATAGCGGG
AAATTAGACAGAAAGGTGACTTCTCAAATCAAATGCTTTGCAGTTGTGGAAGGAGAAATT
GTGTCATGTGCGTTTGACAACAAGATCTGGAGAGTATCTCTGCTTGGAGATCAATGCGGA
GATGCAAATTCTGTAGATGTTGGCACCCAACCTAAGGACTTAAGCCTTGCCCTTAATTCT
CCTGAAGTAACTTTAGTTTCGTTTGAAACTGGAGTCATTCTTCTCCGTGGTACAGAAGTG
CTGTCAACCATAAACCTCGGATTTACGGTGACGGCATCTGTTATTTCACCTGATGGAACT
GAAGCAATAGTGGGTGGTCAGGATGGTAAACTTCATTTGTATTCCATCACGGGTGATACT
CTCAATGAAGAGGTTGTCCTTGAAAAACACAGGGGAGCTATTACTGTTATTCGGTACTCT
CCAGATGTTTCCATGTTTGCATCAGCAGATGTGAACCGAGAAGCTGTCGTCTGGGATCGT
GCATCTCGCGAGGTCAAACTTAAGAATATGTTATACCATACTGCCCGAATAAATTGCCTG
GATTGGTCACCTGATAACACTATGGTAGCTACTGGATCTCTAGACACATGTGTTATAATA
TACGACGTCAGCAAGCCAGCATCGCATCGAATCACTATTAAAGGAGCTCATTTGGGTGGA
GTATACGGACTAGCTTTTACTGATGAACGCAGTATAGTGAGTTCTGGCGAGGATGCTTGT
GTTCGTGTATGGGGAATCACTCCACAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400009954
PEP Infomation

pacid=37463710 transcript=PGSC0003DMT400014412 locus=PGSC0003DMG400005655 ID=PGSC0003DMT400014412.v4.03 annot-version=v4.03
Sequence

MAELKETYACIPSTERGRGILISGDPKSNSILYCNGRSVIIRYLDRPLQVAVYGEHAYQA
TVARYSPNGEWIASADVSGTVRIWGTHNDFVLKKEFRVLSGRIDDLQWSPDGMRIVACGD
GKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPTRPFRIATCGEDFLMNFYEGPPFKF
KLSHREHSNFVNCLRFSPDGSKLISVSSDKKGIIYDAKTGDIIGELSSEDGHQGSIYAVS
WSPDSKQVLTVAADKSAKIWDISDDGKGKVKKTLASPGSGGVEDMLVGCLWQNDHLVTVS
LGGTISIFSASDLEKSPVSFSGHMKNVNSLAVLRSDPKIILSTSYDGLIVKWIQGIGYSG
KLDRKVTSQIKCFAVVEGEIVSCAFDNKIWRVSLLGDQCGDANSVDVGTQPKDLSLALNS
PEVTLVSFETGVILLRGTEVLSTINLGFTVTASVISPDGTEAIVGGQDGKLHLYSITGDT
LNEEVVLEKHRGAITVIRYSPDVSMFASADVNREAVVWDRASREVKLKNMLYHTARINCL
DWSPDNTMVATGSLDTCVIIYDVSKPASHRITIKGAHLGGVYGLAFTDERSIVSSGEDAC
VRVWGITPQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400014412
Transcript Infomation

pacid=37463710 locus=PGSC0003DMG400005655 ID=PGSC0003DMT400014412.v4.03 annot-version=v4.03
Sequence

ATGGCTGAACTCAAAGAAACTTACGCTTGTATACCTTCCACTGAACGAGGTCGCGGTATT
CTCATTTCGGGTGACCCGAAATCCAACTCTATCCTTTATTGTAACGGCCGATCCGTTATT
ATCCGGTACCTCGATCGCCCCCTCCAAGTTGCAGTTTACGGGGAGCATGCTTATCAGGCT
ACAGTCGCTCGTTATTCTCCTAATGGTGAGTGGATCGCTTCTGCTGACGTTTCAGGTACT
GTTCGGATCTGGGGGACCCATAATGACTTCGTTCTTAAGAAAGAGTTTCGAGTCCTATCG
GGTCGGATCGATGACCTTCAATGGTCTCCTGATGGAATGCGCATTGTTGCTTGTGGTGAT
GGCAAGGGCAAATCACTTGTTCGTGCCTTCATGTGGGACTCGGGAACAAATGTGGGTGAA
TTTGATGGCCATTCAAGGAGAGTTTTGAGTTGCGCTTTTAAACCCACAAGACCATTTCGC
ATAGCCACGTGCGGTGAAGACTTCTTGATGAACTTTTATGAAGGACCACCATTTAAATTC
AAGCTGTCTCACAGGGAGCATTCAAATTTTGTCAATTGTTTGAGGTTCTCTCCAGACGGA
AGCAAACTTATCAGTGTAAGCTCTGACAAGAAGGGCATTATTTATGATGCCAAAACAGGA
GATATAATTGGAGAGCTGTCATCTGAGGATGGTCATCAGGGAAGTATATATGCTGTTAGT
TGGAGTCCTGATAGTAAACAGGTGCTCACAGTCGCTGCTGATAAGTCAGCAAAAATATGG
GATATATCTGATGATGGAAAAGGGAAAGTGAAGAAAACACTGGCTTCTCCTGGTTCTGGT
GGAGTTGAGGACATGCTAGTTGGCTGTCTCTGGCAAAATGACCATCTTGTTACTGTTTCT
CTTGGTGGAACTATTTCCATATTCTCAGCAAGTGATCTGGAAAAATCTCCGGTGTCATTT
TCTGGACACATGAAAAATGTTAATTCCTTAGCTGTCCTCAGAAGTGACCCGAAAATCATA
TTGTCCACCAGTTATGATGGTTTGATTGTTAAATGGATTCAAGGCATTGGATATAGCGGG
AAATTAGACAGAAAGGTGACTTCTCAAATCAAATGCTTTGCAGTTGTGGAAGGAGAAATT
GTGTCATGTGCGTTTGACAACAAGATCTGGAGAGTATCTCTGCTTGGAGATCAATGCGGA
GATGCAAATTCTGTAGATGTTGGCACCCAACCTAAGGACTTAAGCCTTGCCCTTAATTCT
CCTGAAGTAACTTTAGTTTCGTTTGAAACTGGAGTCATTCTTCTCCGTGGTACAGAAGTG
CTGTCAACCATAAACCTCGGATTTACGGTGACGGCATCTGTTATTTCACCTGATGGAACT
GAAGCAATAGTGGGTGGTCAGGATGGTAAACTTCATTTGTATTCCATCACGGGTGATACT
CTCAATGAAGAGGTTGTCCTTGAAAAACACAGGGGAGCTATTACTGTTATTCGGTACTCT
CCAGATGTTTCCATGTTTGCATCAGCAGATGTGAACCGAGAAGCTGTCGTCTGGGATCGT
GCATCTCGCGAGGTCAAACTTAAGAATATGTTATACCATACTGCCCGAATAAATTGCCTG
GATTGGTCACCTGATAACACTATGGTAGCTACTGGATCTCTAGACACATGTGTTATAATA
TACGACGTCAGCAAGCCAGCATCGCATCGAATCACTATTAAAGGAGCTCATTTGGGTGGA
GTATACGGACTAGCTTTTACTGATGAACGCAGTATAGTGAGTTCTGGCGAGGATGCTTGT
GTTCGTGTATGGGGAATCACTCCACAGTAA