Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014398
CDS Infomation

pacid=37463425 polypeptide=PGSC0003DMP400009948 locus=PGSC0003DMG400005649 ID=PGSC0003DMT400014398.v4.03 annot-version=v4.03
Sequence

ATGGCAGCAGCTAAACGGGTTTTAGATAACTCTAATCCGGATACGAACCAACCGAATTAC
AAACGCATGAGATCTACTACACCTTCTTTTGCTTCTGTTATTAAGGAAGCAATGAAGGCG
AATTTCCTAGAGAACTTGTCTTCTGCTTTGGAACCGATGCTCCGTCGAGTGATTCCTGAG
GAAGTGGAGAATGGACTAAGGCGTTATTCATGTCGTTCATTAGCGAGATCTCCTTCACTA
AGAATCAAAGCACTAGAACCATCGAATCTTCGTCTCATTTTCAACAAAAAGCTCTCGCAA
CCAATATTCACCGGAAGCAAAGTCGTCGCCGGCGGCGACGACGGCCAGAGTCTTCAAATT
CTTCTGGTGGATACAAGCGGCGAAGGCATGGTTCCAACGACTTTACCTTACCCTATCAAA
GTAGAACTCGTCGTACTTAACGGAGATTTCCCGTCCGGAGATACTGAAACTAATTGGTCT
CGCGAAGAATTCGACAAACACGTCGTTAAGGAGAGAACCGGAAAGAGGCCATTGCTTACC
GGCGAACTGAATTTCACGATGCGAGACGGCGTCGTCTCTGTTGGGGAAATCGAGTTTACT
GACAATTCGAGCTGGATTCGGAGCCGGAAATTCAGAATTGGCGCAAAAGTGGTTCAAATT
GGAAACAATCAAACTACCGTTCGAATTACAGAAGCCGTTACTGAATCGTTTGTGGTTAAA
GATCACCGCGGAGAATCGTACAAAAAACATTACCCACCAGCACTAGGAGATGAAGTGTGG
CGTCTTGAGAAGATTGGAAAAGATGGAACTTTCCGCAAAAAGCTTTCTTCAAAAGGCATC
AACACTGTACAAGATTTCTTGAAGTTGGCTACTATTGACACACCACAAATTAGAACTATA
CTGGGAACTGGAATGTCAGATAAAATGTGGGAAGTGACATACAAGCATGCAAAAACTTGT
GAGATGGGCTCAAAGTTATTCATGGCCCGTGGACCAAACTACGTTTTAATCCTTACTCCG
ATTTGTCAACTTGTTAGGGCAGTTATTGATGGGCAAATTTACCCTACTCATGACTTACCA
GGAATACAAAAGGTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400009948
PEP Infomation

pacid=37463425 transcript=PGSC0003DMT400014398 locus=PGSC0003DMG400005649 ID=PGSC0003DMT400014398.v4.03 annot-version=v4.03
Sequence

MAAAKRVLDNSNPDTNQPNYKRMRSTTPSFASVIKEAMKANFLENLSSALEPMLRRVIPE
EVENGLRRYSCRSLARSPSLRIKALEPSNLRLIFNKKLSQPIFTGSKVVAGGDDGQSLQI
LLVDTSGEGMVPTTLPYPIKVELVVLNGDFPSGDTETNWSREEFDKHVVKERTGKRPLLT
GELNFTMRDGVVSVGEIEFTDNSSWIRSRKFRIGAKVVQIGNNQTTVRITEAVTESFVVK
DHRGESYKKHYPPALGDEVWRLEKIGKDGTFRKKLSSKGINTVQDFLKLATIDTPQIRTI
LGTGMSDKMWEVTYKHAKTCEMGSKLFMARGPNYVLILTPICQLVRAVIDGQIYPTHDLP
GIQKV*

Transcript Sequence

Transcript ID

PGSC0003DMT400014398
Transcript Infomation

pacid=37463425 locus=PGSC0003DMG400005649 ID=PGSC0003DMT400014398.v4.03 annot-version=v4.03
Sequence

ATGGCAGCAGCTAAACGGGTTTTAGATAACTCTAATCCGGATACGAACCAACCGAATTAC
AAACGCATGAGATCTACTACACCTTCTTTTGCTTCTGTTATTAAGGAAGCAATGAAGGCG
AATTTCCTAGAGAACTTGTCTTCTGCTTTGGAACCGATGCTCCGTCGAGTGATTCCTGAG
GAAGTGGAGAATGGACTAAGGCGTTATTCATGTCGTTCATTAGCGAGATCTCCTTCACTA
AGAATCAAAGCACTAGAACCATCGAATCTTCGTCTCATTTTCAACAAAAAGCTCTCGCAA
CCAATATTCACCGGAAGCAAAGTCGTCGCCGGCGGCGACGACGGCCAGAGTCTTCAAATT
CTTCTGGTGGATACAAGCGGCGAAGGCATGGTTCCAACGACTTTACCTTACCCTATCAAA
GTAGAACTCGTCGTACTTAACGGAGATTTCCCGTCCGGAGATACTGAAACTAATTGGTCT
CGCGAAGAATTCGACAAACACGTCGTTAAGGAGAGAACCGGAAAGAGGCCATTGCTTACC
GGCGAACTGAATTTCACGATGCGAGACGGCGTCGTCTCTGTTGGGGAAATCGAGTTTACT
GACAATTCGAGCTGGATTCGGAGCCGGAAATTCAGAATTGGCGCAAAAGTGGTTCAAATT
GGAAACAATCAAACTACCGTTCGAATTACAGAAGCCGTTACTGAATCGTTTGTGGTTAAA
GATCACCGCGGAGAATCGTACAAAAAACATTACCCACCAGCACTAGGAGATGAAGTGTGG
CGTCTTGAGAAGATTGGAAAAGATGGAACTTTCCGCAAAAAGCTTTCTTCAAAAGGCATC
AACACTGTACAAGATTTCTTGAAGTTGGCTACTATTGACACACCACAAATTAGAACTATA
CTGGGAACTGGAATGTCAGATAAAATGTGGGAAGTGACATACAAGCATGCAAAAACTTGT
GAGATGGGCTCAAAGTTATTCATGGCCCGTGGACCAAACTACGTTTTAATCCTTACTCCG
ATTTGTCAACTTGTTAGGGCAGTTATTGATGGGCAAATTTACCCTACTCATGACTTACCA
GGAATACAAAAGGTATGA