Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014383
CDS Infomation

pacid=37460512 polypeptide=PGSC0003DMP400009936 locus=PGSC0003DMG400005641 ID=PGSC0003DMT400014383.v4.03 annot-version=v4.03
Sequence

ATGGAAACAGAAATGTCTTTCTTGTCTAAAAGTTCAAGTAGTAGTTCTAGTGATGATGAT
ATTGAATTGAGGAGAGGTCCATGGACTATTGAAGAAGATAAACTGCTTGTTCATTACATT
ACTAATCATGGCGAAGGACGATGGAATATGCTAGCGAAACATGCTGGATTGAAGAGAACA
GGCAAGAGTTGCAGATTGAGATGGTTGAATTACCTTAAACCGGACGTTAAACGGGGAAAT
CTCACTCCTCAGGAACAGCTCCTGATTCTTGAACTTCATTCCAAATTGGGCAACAGATGG
TCAAAAATCGCGCAATATCTACCTGGAAGAACGGACAATGAAATCAAGAATTACTGGAGA
ACGAGAGTGCAGAAACAAGCTAGGAATCTGAAGATTGACTCGAATAGTGCAGCATTTCAA
GAAATGATTCGTTCTTTGTGGATCCCGCGGCTTCTTCAGAAGATACAGAGCTCCTCTGTT
CCGCCATCAATTCAGAGTTCACAATCATCAACCCCTCCAGGTTTCAGCACCAGCACCAGC
AGTAATTCGAGTTCACATTCCTGTAGTATCTATAATTCTCCCAAAATTACCTCAGAATGT
CCTGAAATTACTCCACGCCAGATAGATGATTCTGACTTAAATTCATTCGTCAAGGCTCAT
TTTCCATTTGACAACAGTTATGATATGGATAATTTTGGACAATTAGCAACTGGAAACTTT
AATGATGTGATGGATTATGATCAAATGAGTGGAGATCAAAACAAGTTGACAAGTGACAGT
TTTTGGAGCAATATGGATGAATTTTTCTACCAAAAAACAGGATATGAGCAATTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400009936
PEP Infomation

pacid=37460512 transcript=PGSC0003DMT400014383 locus=PGSC0003DMG400005641 ID=PGSC0003DMT400014383.v4.03 annot-version=v4.03
Sequence

METEMSFLSKSSSSSSSDDDIELRRGPWTIEEDKLLVHYITNHGEGRWNMLAKHAGLKRT
GKSCRLRWLNYLKPDVKRGNLTPQEQLLILELHSKLGNRWSKIAQYLPGRTDNEIKNYWR
TRVQKQARNLKIDSNSAAFQEMIRSLWIPRLLQKIQSSSVPPSIQSSQSSTPPGFSTSTS
SNSSSHSCSIYNSPKITSECPEITPRQIDDSDLNSFVKAHFPFDNSYDMDNFGQLATGNF
NDVMDYDQMSGDQNKLTSDSFWSNMDEFFYQKTGYEQL*

Transcript Sequence

Transcript ID

PGSC0003DMT400014383
Transcript Infomation

pacid=37460512 locus=PGSC0003DMG400005641 ID=PGSC0003DMT400014383.v4.03 annot-version=v4.03
Sequence

ATGGAAACAGAAATGTCTTTCTTGTCTAAAAGTTCAAGTAGTAGTTCTAGTGATGATGAT
ATTGAATTGAGGAGAGGTCCATGGACTATTGAAGAAGATAAACTGCTTGTTCATTACATT
ACTAATCATGGCGAAGGACGATGGAATATGCTAGCGAAACATGCTGGATTGAAGAGAACA
GGCAAGAGTTGCAGATTGAGATGGTTGAATTACCTTAAACCGGACGTTAAACGGGGAAAT
CTCACTCCTCAGGAACAGCTCCTGATTCTTGAACTTCATTCCAAATTGGGCAACAGATGG
TCAAAAATCGCGCAATATCTACCTGGAAGAACGGACAATGAAATCAAGAATTACTGGAGA
ACGAGAGTGCAGAAACAAGCTAGGAATCTGAAGATTGACTCGAATAGTGCAGCATTTCAA
GAAATGATTCGTTCTTTGTGGATCCCGCGGCTTCTTCAGAAGATACAGAGCTCCTCTGTT
CCGCCATCAATTCAGAGTTCACAATCATCAACCCCTCCAGGTTTCAGCACCAGCACCAGC
AGTAATTCGAGTTCACATTCCTGTAGTATCTATAATTCTCCCAAAATTACCTCAGAATGT
CCTGAAATTACTCCACGCCAGATAGATGATTCTGACTTAAATTCATTCGTCAAGGCTCAT
TTTCCATTTGACAACAGTTATGATATGGATAATTTTGGACAATTAGCAACTGGAAACTTT
AATGATGTGATGGATTATGATCAAATGAGTGGAGATCAAAACAAGTTGACAAGTGACAGT
TTTTGGAGCAATATGGATGAATTTTTCTACCAAAAAACAGGATATGAGCAATTGTAA