Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014346
CDS Infomation

pacid=37462511 polypeptide=PGSC0003DMP400009902 locus=PGSC0003DMG400005625 ID=PGSC0003DMT400014346.v4.03 annot-version=v4.03
Sequence

ATGAGCCGATCTGCATCATTTTTGGTGAGATCAGAAGCTGATTTAAAAGTAGATGAAAAA
TCTCTACAGCAATGGGTTGTTGGCTTCTGTATTATTAGGTTTGATCTTGAACAGGGACAG
CTTATTGAAGAATGTTACCCAGCGGGCTGTCTAACACATAATGAGGAGCTTGAAGTTGCC
TTTAGCTCATTTCCGGATTCAGTTTCTCAGAATCATAACCGATCAAGCATCCATGACTGT
ATCTTTTTCTTCCGTGTCCGGAGGCAGGGGAATCCTCAAGTGGCACATCTGCCTTCATCC
GAGATAGTGGAAGTAAATAAAACACAAGCATCCCAAATGACAGCCAGTGATAAGGTGCTA
AAACAAAGGAGTAAAATTCAAACAGGGGCGAACTCAAGATATTTGTACGGGTTTGTGTTT
AATAGACAGAGACACGATGAAAGGCTAAAACGGGGTGGTGAGCAAAAGTCCGTGGTAATT
CTTTCTCACAACCCATTCTCTAGTGTCTTTCGACCTTTGCTGCAGATCATGGGCCCATTG
TACTTTGATATTGGGAAGAAAGCCCTCAATTTCATTGCTTCTTATGTATCAATGTGGCCT
GTTCCTGTACCTGGTCAGTTAATGGAGCTTCCAATTGGGAATGCTACTCTTAAAGTGAAC
TTGCCACCTGCCCATTGTATGCCTTTGGATTGTGGAGTACTTTTTGAAGAGTTGGCTTCT
CCAATAGCCCCATTTCTTCCTTCCAGTCAATCAGTTCCACAAGGTCTTTTCCATGATGCA
GATCTTTTTGGGACATTTAGGGGGCTTTTAATGCAGCTTTGGAAGTTATGGGAATTGTTA
CTTATTGGAGAACCCATTCTTATCATAGCGCCAACACCACCTCAGTGCTGTGAAGCTGTT
GCTGGTCTGGTTAGTCTGGTCGCTCCGCTTCTATGTAGCATTGATTTCAGGCCTTACTTT
ACTATTCATGATCCCGACTTTGCTCATTTAAACTCCCTTCAAGAAGGTGCTGCTTTTCCT
CCAATGATTTTGGGTGTGACAAACCTCTTTTTCTTGAAATCCCTTCGAAGAATTCCACAC
GTCTTATCAGTTGGAAATCCTGTCATGAATGCAGCTCGACTTCCATTTTCTGCTAGAGCT
TCAACCGGTAGAATTCCGGCTGGACCTGAAGGACTTAGTCTTCCCAATCTTTCCTTGAAT
AGGTTTACACCATCAAATTTTTTGAATGCTATGAAGTTGAGGAGAGATGGTCCACTCTGC
CTGATGACTGAGCACAAAGAAGCCTTTTGGAGCAGTTATGCTCCAATTACAAAGCCAGAC
ACTTCAATCTTGAATAGGCTAATTGATGCAGGTATGTCACCCAGGGTAGAGGAATCAATG
TCAGTTGTTAATAATGACATACTTCGTCGGCACTTCTTAGAGCTGACAACCAACTTCTTG
GCCCCATTCGGCCCGTATTATAGACCAACAACACCTTCTGAAGGATCTTCCCCATATGTT
GATCCTCCTCCTCTACCCACATTTAATGCCGAGGACTTCCTCACTAGCTTGTCAGCAAGG
GGTCCTGGAAAGTTTCTGTTGAAGAGGATGAAATCCAACTGGCTGGACCTTTACAGACGG
TTTCTGAAAGGGCACAACTTTTTGCCGTGGTTTCAACGAAAGCGTGCTGTTGCTGAACAA
GAACAGTATAGGTTGTGGAGGCAAGCTAGAATGAGGGCTGACATACAACATTTTATATCT
AGAATGTCTGAGTTGGAGATTGTTGATACTTTCAATGCAATTGAAAAGCATCTTCTTGGA
GAATTACAGTCTACCACTCTTGAAGTAGGTTCTGATGCCACTAGCAGCAAACTAAGGGAG
GATCTTCAGGCAGTGTTTCACGTCCTCCCAAAGGACATGCAGCAGCTTATGCTAATGAAC
CCGGAGAGGGCAGCACTTGTACGAGATGATGAGCTTCCCTCTAAATCAACCAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400009902
PEP Infomation

pacid=37462511 transcript=PGSC0003DMT400014346 locus=PGSC0003DMG400005625 ID=PGSC0003DMT400014346.v4.03 annot-version=v4.03
Sequence

MSRSASFLVRSEADLKVDEKSLQQWVVGFCIIRFDLEQGQLIEECYPAGCLTHNEELEVA
FSSFPDSVSQNHNRSSIHDCIFFFRVRRQGNPQVAHLPSSEIVEVNKTQASQMTASDKVL
KQRSKIQTGANSRYLYGFVFNRQRHDERLKRGGEQKSVVILSHNPFSSVFRPLLQIMGPL
YFDIGKKALNFIASYVSMWPVPVPGQLMELPIGNATLKVNLPPAHCMPLDCGVLFEELAS
PIAPFLPSSQSVPQGLFHDADLFGTFRGLLMQLWKLWELLLIGEPILIIAPTPPQCCEAV
AGLVSLVAPLLCSIDFRPYFTIHDPDFAHLNSLQEGAAFPPMILGVTNLFFLKSLRRIPH
VLSVGNPVMNAARLPFSARASTGRIPAGPEGLSLPNLSLNRFTPSNFLNAMKLRRDGPLC
LMTEHKEAFWSSYAPITKPDTSILNRLIDAGMSPRVEESMSVVNNDILRRHFLELTTNFL
APFGPYYRPTTPSEGSSPYVDPPPLPTFNAEDFLTSLSARGPGKFLLKRMKSNWLDLYRR
FLKGHNFLPWFQRKRAVAEQEQYRLWRQARMRADIQHFISRMSELEIVDTFNAIEKHLLG
ELQSTTLEVGSDATSSKLREDLQAVFHVLPKDMQQLMLMNPERAALVRDDELPSKSTR*

Transcript Sequence

Transcript ID

PGSC0003DMT400014346
Transcript Infomation

pacid=37462511 locus=PGSC0003DMG400005625 ID=PGSC0003DMT400014346.v4.03 annot-version=v4.03
Sequence

ATGAGCCGATCTGCATCATTTTTGGTGAGATCAGAAGCTGATTTAAAAGTAGATGAAAAA
TCTCTACAGCAATGGGTTGTTGGCTTCTGTATTATTAGGTTTGATCTTGAACAGGGACAG
CTTATTGAAGAATGTTACCCAGCGGGCTGTCTAACACATAATGAGGAGCTTGAAGTTGCC
TTTAGCTCATTTCCGGATTCAGTTTCTCAGAATCATAACCGATCAAGCATCCATGACTGT
ATCTTTTTCTTCCGTGTCCGGAGGCAGGGGAATCCTCAAGTGGCACATCTGCCTTCATCC
GAGATAGTGGAAGTAAATAAAACACAAGCATCCCAAATGACAGCCAGTGATAAGGTGCTA
AAACAAAGGAGTAAAATTCAAACAGGGGCGAACTCAAGATATTTGTACGGGTTTGTGTTT
AATAGACAGAGACACGATGAAAGGCTAAAACGGGGTGGTGAGCAAAAGTCCGTGGTAATT
CTTTCTCACAACCCATTCTCTAGTGTCTTTCGACCTTTGCTGCAGATCATGGGCCCATTG
TACTTTGATATTGGGAAGAAAGCCCTCAATTTCATTGCTTCTTATGTATCAATGTGGCCT
GTTCCTGTACCTGGTCAGTTAATGGAGCTTCCAATTGGGAATGCTACTCTTAAAGTGAAC
TTGCCACCTGCCCATTGTATGCCTTTGGATTGTGGAGTACTTTTTGAAGAGTTGGCTTCT
CCAATAGCCCCATTTCTTCCTTCCAGTCAATCAGTTCCACAAGGTCTTTTCCATGATGCA
GATCTTTTTGGGACATTTAGGGGGCTTTTAATGCAGCTTTGGAAGTTATGGGAATTGTTA
CTTATTGGAGAACCCATTCTTATCATAGCGCCAACACCACCTCAGTGCTGTGAAGCTGTT
GCTGGTCTGGTTAGTCTGGTCGCTCCGCTTCTATGTAGCATTGATTTCAGGCCTTACTTT
ACTATTCATGATCCCGACTTTGCTCATTTAAACTCCCTTCAAGAAGGTGCTGCTTTTCCT
CCAATGATTTTGGGTGTGACAAACCTCTTTTTCTTGAAATCCCTTCGAAGAATTCCACAC
GTCTTATCAGTTGGAAATCCTGTCATGAATGCAGCTCGACTTCCATTTTCTGCTAGAGCT
TCAACCGGTAGAATTCCGGCTGGACCTGAAGGACTTAGTCTTCCCAATCTTTCCTTGAAT
AGGTTTACACCATCAAATTTTTTGAATGCTATGAAGTTGAGGAGAGATGGTCCACTCTGC
CTGATGACTGAGCACAAAGAAGCCTTTTGGAGCAGTTATGCTCCAATTACAAAGCCAGAC
ACTTCAATCTTGAATAGGCTAATTGATGCAGGTATGTCACCCAGGGTAGAGGAATCAATG
TCAGTTGTTAATAATGACATACTTCGTCGGCACTTCTTAGAGCTGACAACCAACTTCTTG
GCCCCATTCGGCCCGTATTATAGACCAACAACACCTTCTGAAGGATCTTCCCCATATGTT
GATCCTCCTCCTCTACCCACATTTAATGCCGAGGACTTCCTCACTAGCTTGTCAGCAAGG
GGTCCTGGAAAGTTTCTGTTGAAGAGGATGAAATCCAACTGGCTGGACCTTTACAGACGG
TTTCTGAAAGGGCACAACTTTTTGCCGTGGTTTCAACGAAAGCGTGCTGTTGCTGAACAA
GAACAGTATAGGTTGTGGAGGCAAGCTAGAATGAGGGCTGACATACAACATTTTATATCT
AGAATGTCTGAGTTGGAGATTGTTGATACTTTCAATGCAATTGAAAAGCATCTTCTTGGA
GAATTACAGTCTACCACTCTTGAAGTAGGTTCTGATGCCACTAGCAGCAAACTAAGGGAG
GATCTTCAGGCAGTGTTTCACGTCCTCCCAAAGGACATGCAGCAGCTTATGCTAATGAAC
CCGGAGAGGGCAGCACTTGTACGAGATGATGAGCTTCCCTCTAAATCAACCAGATGA