Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014313
CDS Infomation

pacid=37462225 polypeptide=PGSC0003DMP400009882 locus=PGSC0003DMG400005617 ID=PGSC0003DMT400014313.v4.03 annot-version=v4.03
Sequence

ATGTCATCAATTGGCAAAACAGTTAACAAGTACAACTTATTAGCTACCAATGGTTCAGGG
GAAGCTCCGCCGTGTAGACCATGGGACCGGGATGATTTGTTTACAAGGATATCAACTTTT
AAGTCTATGACTTGGTTTGCTAAACCACAGGCAATCAGTGCTGTTAACTGTGCTAGAAGG
GGTTGGATCAATGTGGATATGGATACCATTGCCTGTGAAGCATGTGGATCACGAATGCTC
TTCACTACTCCGCCTTCTTGGGCACAACAACAAGTTGACAAAGCGGCCTTGGTGTTCAGC
TTGAAGCTAGATAGTGGACACAAGCTACTTTGCCCTTGGATTGACAATGTCTGCGATGAA
AAACTAGCAGAGTTTCCACCTATGGCTACTGTTGTGCTTGTTGATCAGTATAAAATTCGG
CATTCTGTTCTATCACAGCTTGCTGCTCTTCCTGTGATTTCACCTAAGGCCATTGATTTC
TTGAGAAACCCTCAGCTAAAACAATTTCTACGAGAATCTTTACCTGTGGAACGTGATGAA
TCCATGCAAACTCCCCAAGAAGAAACCAGAAATGAACCCACTTCAGTTTCTTCTCTCACA
TATTATCAGGCACAAAAGCTCATTAGCTTGTGTGGGTGGGAACTCCGCAGACTGCCATAT
TTGGTTGACCCCAAGGATCAACTGAATCAATCTAGTAAGGATGCCAATCTCTCAGATATG
TCTATTTTGAGCAGAAAAAGTCAGACTATTACTTTCTACAGTTCATGTACTGATAAGACT
TCTGAGAGCAAGCGAGATGATGACAATCAAGCTTCTGAAGAAGCAGTAATCAATCCAAAT
TCTGTTGTTCTCGACTGCAAATTTTGTGGGGCTTGTATTGGTCTATGGGATTTTTCCATG
GTTTCTCGGCCTTTGGAATTTCTACGAGTAAGTGGATACACACAGGTCAACAATGACCAT
ATCAATCACACCGACAGTGATAAAAATCTTCTCTCAGGCAACAGTGATCGTGATGAGAGT
AGAGAATGCATAGGACAAGTTGCAACTTCTGCTAACACTATGTTAGATAGAAGACCACCA
AATTTCAACTTGACGATTGCCGGTGGTCCTCCTCCAGTAACACATAATTATAGGGCAAAA
ATATCTCTGCCAATCGTTGGACGGAATTTGAGAGCATGGTTTATTGCTGAATCTGAGCTC
AAGGATGATTTAGTAACCAAGAGCTCATCTGGTGTATGCAAAAATCCAGAGTTTCTTGCA
GGAGAAAATACTGAGGAAGGAACTTCACTGTCTACTTCGGAAGTGATTACAGAAGCTCAA
CCCGAAAACAACCAGGCTGCAGCACAAGTTTCTGGTAACACCACTGAAATGGCTGATAAT
GCAGAAAGTATGAACAAGGTTGATCCAGCAGTCACGGATCATTGTAAGGACAAGGTTGGA
AATGATTTTGGATCATCTAGTCGAGGGAAGGAGTTGCCAATTCTATCCTTAGATAAAACT
TTGGAGTTTGATCCATTCAAGCTACACAGATATTTTTGCCCCTGGATAGCATCTAATGGT
GGCTCTCCACCAGGATGGGAACAAACATTATCTGCTTTAGAACGTCATGATGAATCTTCT
TCTCCTTTGTCCAATCATGCTCCATCTTCCTTGATTAAGGTGGATGATCCTCTTGCTTCA
GTGCAAAAGCTTTTTACATCTCCACAGGCTAAACGAAGGAAGCTTGTTCGTCCAAGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400009882
PEP Infomation

pacid=37462225 transcript=PGSC0003DMT400014313 locus=PGSC0003DMG400005617 ID=PGSC0003DMT400014313.v4.03 annot-version=v4.03
Sequence

MSSIGKTVNKYNLLATNGSGEAPPCRPWDRDDLFTRISTFKSMTWFAKPQAISAVNCARR
GWINVDMDTIACEACGSRMLFTTPPSWAQQQVDKAALVFSLKLDSGHKLLCPWIDNVCDE
KLAEFPPMATVVLVDQYKIRHSVLSQLAALPVISPKAIDFLRNPQLKQFLRESLPVERDE
SMQTPQEETRNEPTSVSSLTYYQAQKLISLCGWELRRLPYLVDPKDQLNQSSKDANLSDM
SILSRKSQTITFYSSCTDKTSESKRDDDNQASEEAVINPNSVVLDCKFCGACIGLWDFSM
VSRPLEFLRVSGYTQVNNDHINHTDSDKNLLSGNSDRDESRECIGQVATSANTMLDRRPP
NFNLTIAGGPPPVTHNYRAKISLPIVGRNLRAWFIAESELKDDLVTKSSSGVCKNPEFLA
GENTEEGTSLSTSEVITEAQPENNQAAAQVSGNTTEMADNAESMNKVDPAVTDHCKDKVG
NDFGSSSRGKELPILSLDKTLEFDPFKLHRYFCPWIASNGGSPPGWEQTLSALERHDESS
SPLSNHAPSSLIKVDDPLASVQKLFTSPQAKRRKLVRPS*

Transcript Sequence

Transcript ID

PGSC0003DMT400014313
Transcript Infomation

pacid=37462225 locus=PGSC0003DMG400005617 ID=PGSC0003DMT400014313.v4.03 annot-version=v4.03
Sequence

ATGTCATCAATTGGCAAAACAGTTAACAAGTACAACTTATTAGCTACCAATGGTTCAGGG
GAAGCTCCGCCGTGTAGACCATGGGACCGGGATGATTTGTTTACAAGGATATCAACTTTT
AAGTCTATGACTTGGTTTGCTAAACCACAGGCAATCAGTGCTGTTAACTGTGCTAGAAGG
GGTTGGATCAATGTGGATATGGATACCATTGCCTGTGAAGCATGTGGATCACGAATGCTC
TTCACTACTCCGCCTTCTTGGGCACAACAACAAGTTGACAAAGCGGCCTTGGTGTTCAGC
TTGAAGCTAGATAGTGGACACAAGCTACTTTGCCCTTGGATTGACAATGTCTGCGATGAA
AAACTAGCAGAGTTTCCACCTATGGCTACTGTTGTGCTTGTTGATCAGTATAAAATTCGG
CATTCTGTTCTATCACAGCTTGCTGCTCTTCCTGTGATTTCACCTAAGGCCATTGATTTC
TTGAGAAACCCTCAGCTAAAACAATTTCTACGAGAATCTTTACCTGTGGAACGTGATGAA
TCCATGCAAACTCCCCAAGAAGAAACCAGAAATGAACCCACTTCAGTTTCTTCTCTCACA
TATTATCAGGCACAAAAGCTCATTAGCTTGTGTGGGTGGGAACTCCGCAGACTGCCATAT
TTGGTTGACCCCAAGGATCAACTGAATCAATCTAGTAAGGATGCCAATCTCTCAGATATG
TCTATTTTGAGCAGAAAAAGTCAGACTATTACTTTCTACAGTTCATGTACTGATAAGACT
TCTGAGAGCAAGCGAGATGATGACAATCAAGCTTCTGAAGAAGCAGTAATCAATCCAAAT
TCTGTTGTTCTCGACTGCAAATTTTGTGGGGCTTGTATTGGTCTATGGGATTTTTCCATG
GTTTCTCGGCCTTTGGAATTTCTACGAGTAAGTGGATACACACAGGTCAACAATGACCAT
ATCAATCACACCGACAGTGATAAAAATCTTCTCTCAGGCAACAGTGATCGTGATGAGAGT
AGAGAATGCATAGGACAAGTTGCAACTTCTGCTAACACTATGTTAGATAGAAGACCACCA
AATTTCAACTTGACGATTGCCGGTGGTCCTCCTCCAGTAACACATAATTATAGGGCAAAA
ATATCTCTGCCAATCGTTGGACGGAATTTGAGAGCATGGTTTATTGCTGAATCTGAGCTC
AAGGATGATTTAGTAACCAAGAGCTCATCTGGTGTATGCAAAAATCCAGAGTTTCTTGCA
GGAGAAAATACTGAGGAAGGAACTTCACTGTCTACTTCGGAAGTGATTACAGAAGCTCAA
CCCGAAAACAACCAGGCTGCAGCACAAGTTTCTGGTAACACCACTGAAATGGCTGATAAT
GCAGAAAGTATGAACAAGGTTGATCCAGCAGTCACGGATCATTGTAAGGACAAGGTTGGA
AATGATTTTGGATCATCTAGTCGAGGGAAGGAGTTGCCAATTCTATCCTTAGATAAAACT
TTGGAGTTTGATCCATTCAAGCTACACAGATATTTTTGCCCCTGGATAGCATCTAATGGT
GGCTCTCCACCAGGATGGGAACAAACATTATCTGCTTTAGAACGTCATGATGAATCTTCT
TCTCCTTTGTCCAATCATGCTCCATCTTCCTTGATTAAGGTGGATGATCCTCTTGCTTCA
GTGCAAAAGCTTTTTACATCTCCACAGGCTAAACGAAGGAAGCTTGTTCGTCCAAGTTAA