Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014307
CDS Infomation

pacid=37460368 polypeptide=PGSC0003DMP400009877 locus=PGSC0003DMG400005614 ID=PGSC0003DMT400014307.v4.03 annot-version=v4.03
Sequence

ATGGCGGCGGTCTCTGCTAAAACCCCAACAATATCTCTCCCTTTAGACCCCCAAAACCCT
CAATTCTCTAAACTCCATTCATCAAAATCTCTAAATTTCTCTCATATCTTCCAAAAATCC
CACCTTTTTTCCCTTAAAAAACCCCACCAAAATTCTATCCTCAGTTCCTCCTCCACCTCT
ACTCCCACCACTGACCCAAATTCCCATCTTATCCAATTATGCTTCCACAGCCAGCTGGAA
CAAGCAATAGTGTTCTTGAAGTCAATAAAGGACCTTCATGGCACCATAGAAGAAGACACT
TTTGTTTCTTTAGCTAGGCTGTGCGAATTCAAGAGAGCATCGAATGAGGCGTGTGAAGTA
TTTTCTTGCATACTCAACTGTATGACCCAGTTGAGCTTGAGGCTTGGAAATGCCTTGCTG
AGTATGTTTGTCAGGTTGGGGAATTTGGGTGATGCTTGGTATGTTTTTGGGAAAATGGAG
GAGAGGGATGTTTTTTCTTGGAATGTTTTGATTGGTGGGTATGCGAAAAATGGGTATTTT
GATGAGGCTTTAGATTTGTATCAACGGATGTTGTGGGTTGGAATTAGGCCTGATGTCTAT
ACTTTTCCTTGTGTCTTGAGGACTTGTGGGGGTTTGCCTGATTGGAGAATGGGCAGGGAG
ATACATGCTCATGTAATACGTTTTAGCTATGATTCGGAAATCGATGTCGTTAATGCATTG
ATTACAATGTATGTTAAGTGTGGTGATGTTTGCAGTGCAAGAGTGCTGTTTGATGGAATG
TCTAAGAGAGATAGAATTTCTTGGAATGCTATGATTTCGGGTTACTTTGAGAATGGTGAG
TTTTTGGAGGGGTTAATGTTGTTCTCCTCAATGAGGGAATTTGGCTTTTTTCCGGATTTG
ATGACCATGACAAGTGTGATTTCAGCTTGTGAGGCTCTTGGGGATGAGAGGTTAGGGAGA
GCACTTCACGGGTATGTGTCAAGAATGGACTTTTATAGTGATGTTTCGGCGCACAACTCT
CTCATTCAACTTTATTCAGCTATTGGGAGCTGGGAGGAAGCAGAAAAGATCTTTGATAGG
ATACAATGTAAAGATGTAGTTTCATGGACAGCAATGATCTCGGGTTATGAGAGTAATGGG
TTTCCTGAGAAGGCCATTAAGACGTACAAAATGATGGAACTAGAAGGTGTCATGCCGGAT
GAAATTACTATAGCTTCTGTTCTATCTGCCTGTACTTCATTGGGCCTTCTAGAAATGGGT
GTTAAGCTTCAACATCTAGCCGAAAGGAGAGGACTTATAGCATACGTGATTGTCTCAAAC
ACTCTGATCGACTTGTATTCCAAGTGCAACTGTATTGACAAGGCATTGGAAATTTTTCAC
AGGATACCGGATAAAAACGTCATATCTTGGACTTCTATCATTCTTGGTCTACGGATAAAT
AATCGCAGTTTGGAAGCTTTAATTTTTTTTAGAGAAATGAAACGCCATCAGGATCCCAAT
TCTGTTACCTTAATGTCTGTCCTCTCTGCATGTTCTAGAATCGGTGCACTGATGTGTGGT
AAAGAAATACATGCATATGTATTGAGAAACGGAATGGAATTTCATGGTTTTTTACCCAAT
GCACTCCTTGACTTCTACGTGAGGTGTGGAAGGATGGCCCCAGCACTGAATCTGTTTAAT
ACGCAGAAAGAGGATGTTACTGCTTGGAATATCTTGCTGACTGGCTATGCCCAGCGAGGG
CAAGGTGCACTTGCAATCGAGCTTTTTGATGGAATGATAACTTCAAGAGTAAAGCCAGAC
GAAATTACTTTCATTTCTCTGTTACGTGCTTGTAGTAGATCTGATTTGGTTACTGAAGGC
CTTGATTATTTGAATAGCATGGAGAGTAGGTATTGTATTGTTCCGAATCTGAAGCATTAT
GCTTGTGTGGTTGATCTGCTAGGCCGTGCAGGTCTAGTGGACGATGCTTATGATTTTATT
CTATCATTGCCTGTGAAACCCGATTCTGCTATCTGGGGGGCTTTATTAAATGCGTGTAGG
ATCCACAGGCAGGTTGAACTTGGAGAACTAGCAGCTAGACACATTCTTGAAACAGATGAG
AGAGGTGTGGGATATTATGTTCTCCTCTGCAACTTCTATTCTGACAATGGTAGATGGAAT
GAAGTTGTAAGATTAAGGAAGATTATGATAGAAAAGGGACTGACTATTGATCCTGGTTGC
AGCTGGATAGAAGTAAAGGGAAATGTACATGCATTTCTTAGTGGTGATAACTTACACCCC
CAAAGCAAGGATATTAATGCAGTTCTAGAAGGATTTTATGAAAAAATGAAGGCAGCACAT
CCTAGTAAATCAGAAAGATATACAGTAAATGAAGTTAATGATTCAAAAGCCGAGATCTTT
TGTGGACACAGTGAGAGACTAGCTATTGCATTTGGTCTTATAAATACAGCTCCAGGGACA
CCTATTTGGGTCACAAAGAATCTTTATATGTGCAAGAGCTGTCACGACACAATCAAGTTT
ATCTCTGAGGTTGTTCGGAGGGAGATTGCAGTTAGAGATACTGAGCAATTCCACCATTTT
AAGGATGGAAGATGCACATGTGGGGATGAAAACTATTTGGGAGAAACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400009877
PEP Infomation

pacid=37460368 transcript=PGSC0003DMT400014307 locus=PGSC0003DMG400005614 ID=PGSC0003DMT400014307.v4.03 annot-version=v4.03
Sequence

MAAVSAKTPTISLPLDPQNPQFSKLHSSKSLNFSHIFQKSHLFSLKKPHQNSILSSSSTS
TPTTDPNSHLIQLCFHSQLEQAIVFLKSIKDLHGTIEEDTFVSLARLCEFKRASNEACEV
FSCILNCMTQLSLRLGNALLSMFVRLGNLGDAWYVFGKMEERDVFSWNVLIGGYAKNGYF
DEALDLYQRMLWVGIRPDVYTFPCVLRTCGGLPDWRMGREIHAHVIRFSYDSEIDVVNAL
ITMYVKCGDVCSARVLFDGMSKRDRISWNAMISGYFENGEFLEGLMLFSSMREFGFFPDL
MTMTSVISACEALGDERLGRALHGYVSRMDFYSDVSAHNSLIQLYSAIGSWEEAEKIFDR
IQCKDVVSWTAMISGYESNGFPEKAIKTYKMMELEGVMPDEITIASVLSACTSLGLLEMG
VKLQHLAERRGLIAYVIVSNTLIDLYSKCNCIDKALEIFHRIPDKNVISWTSIILGLRIN
NRSLEALIFFREMKRHQDPNSVTLMSVLSACSRIGALMCGKEIHAYVLRNGMEFHGFLPN
ALLDFYVRCGRMAPALNLFNTQKEDVTAWNILLTGYAQRGQGALAIELFDGMITSRVKPD
EITFISLLRACSRSDLVTEGLDYLNSMESRYCIVPNLKHYACVVDLLGRAGLVDDAYDFI
LSLPVKPDSAIWGALLNACRIHRQVELGELAARHILETDERGVGYYVLLCNFYSDNGRWN
EVVRLRKIMIEKGLTIDPGCSWIEVKGNVHAFLSGDNLHPQSKDINAVLEGFYEKMKAAH
PSKSERYTVNEVNDSKAEIFCGHSERLAIAFGLINTAPGTPIWVTKNLYMCKSCHDTIKF
ISEVVRREIAVRDTEQFHHFKDGRCTCGDENYLGET*

Transcript Sequence

Transcript ID

PGSC0003DMT400014307
Transcript Infomation

pacid=37460368 locus=PGSC0003DMG400005614 ID=PGSC0003DMT400014307.v4.03 annot-version=v4.03
Sequence

ATGGCGGCGGTCTCTGCTAAAACCCCAACAATATCTCTCCCTTTAGACCCCCAAAACCCT
CAATTCTCTAAACTCCATTCATCAAAATCTCTAAATTTCTCTCATATCTTCCAAAAATCC
CACCTTTTTTCCCTTAAAAAACCCCACCAAAATTCTATCCTCAGTTCCTCCTCCACCTCT
ACTCCCACCACTGACCCAAATTCCCATCTTATCCAATTATGCTTCCACAGCCAGCTGGAA
CAAGCAATAGTGTTCTTGAAGTCAATAAAGGACCTTCATGGCACCATAGAAGAAGACACT
TTTGTTTCTTTAGCTAGGCTGTGCGAATTCAAGAGAGCATCGAATGAGGCGTGTGAAGTA
TTTTCTTGCATACTCAACTGTATGACCCAGTTGAGCTTGAGGCTTGGAAATGCCTTGCTG
AGTATGTTTGTCAGGTTGGGGAATTTGGGTGATGCTTGGTATGTTTTTGGGAAAATGGAG
GAGAGGGATGTTTTTTCTTGGAATGTTTTGATTGGTGGGTATGCGAAAAATGGGTATTTT
GATGAGGCTTTAGATTTGTATCAACGGATGTTGTGGGTTGGAATTAGGCCTGATGTCTAT
ACTTTTCCTTGTGTCTTGAGGACTTGTGGGGGTTTGCCTGATTGGAGAATGGGCAGGGAG
ATACATGCTCATGTAATACGTTTTAGCTATGATTCGGAAATCGATGTCGTTAATGCATTG
ATTACAATGTATGTTAAGTGTGGTGATGTTTGCAGTGCAAGAGTGCTGTTTGATGGAATG
TCTAAGAGAGATAGAATTTCTTGGAATGCTATGATTTCGGGTTACTTTGAGAATGGTGAG
TTTTTGGAGGGGTTAATGTTGTTCTCCTCAATGAGGGAATTTGGCTTTTTTCCGGATTTG
ATGACCATGACAAGTGTGATTTCAGCTTGTGAGGCTCTTGGGGATGAGAGGTTAGGGAGA
GCACTTCACGGGTATGTGTCAAGAATGGACTTTTATAGTGATGTTTCGGCGCACAACTCT
CTCATTCAACTTTATTCAGCTATTGGGAGCTGGGAGGAAGCAGAAAAGATCTTTGATAGG
ATACAATGTAAAGATGTAGTTTCATGGACAGCAATGATCTCGGGTTATGAGAGTAATGGG
TTTCCTGAGAAGGCCATTAAGACGTACAAAATGATGGAACTAGAAGGTGTCATGCCGGAT
GAAATTACTATAGCTTCTGTTCTATCTGCCTGTACTTCATTGGGCCTTCTAGAAATGGGT
GTTAAGCTTCAACATCTAGCCGAAAGGAGAGGACTTATAGCATACGTGATTGTCTCAAAC
ACTCTGATCGACTTGTATTCCAAGTGCAACTGTATTGACAAGGCATTGGAAATTTTTCAC
AGGATACCGGATAAAAACGTCATATCTTGGACTTCTATCATTCTTGGTCTACGGATAAAT
AATCGCAGTTTGGAAGCTTTAATTTTTTTTAGAGAAATGAAACGCCATCAGGATCCCAAT
TCTGTTACCTTAATGTCTGTCCTCTCTGCATGTTCTAGAATCGGTGCACTGATGTGTGGT
AAAGAAATACATGCATATGTATTGAGAAACGGAATGGAATTTCATGGTTTTTTACCCAAT
GCACTCCTTGACTTCTACGTGAGGTGTGGAAGGATGGCCCCAGCACTGAATCTGTTTAAT
ACGCAGAAAGAGGATGTTACTGCTTGGAATATCTTGCTGACTGGCTATGCCCAGCGAGGG
CAAGGTGCACTTGCAATCGAGCTTTTTGATGGAATGATAACTTCAAGAGTAAAGCCAGAC
GAAATTACTTTCATTTCTCTGTTACGTGCTTGTAGTAGATCTGATTTGGTTACTGAAGGC
CTTGATTATTTGAATAGCATGGAGAGTAGGTATTGTATTGTTCCGAATCTGAAGCATTAT
GCTTGTGTGGTTGATCTGCTAGGCCGTGCAGGTCTAGTGGACGATGCTTATGATTTTATT
CTATCATTGCCTGTGAAACCCGATTCTGCTATCTGGGGGGCTTTATTAAATGCGTGTAGG
ATCCACAGGCAGGTTGAACTTGGAGAACTAGCAGCTAGACACATTCTTGAAACAGATGAG
AGAGGTGTGGGATATTATGTTCTCCTCTGCAACTTCTATTCTGACAATGGTAGATGGAAT
GAAGTTGTAAGATTAAGGAAGATTATGATAGAAAAGGGACTGACTATTGATCCTGGTTGC
AGCTGGATAGAAGTAAAGGGAAATGTACATGCATTTCTTAGTGGTGATAACTTACACCCC
CAAAGCAAGGATATTAATGCAGTTCTAGAAGGATTTTATGAAAAAATGAAGGCAGCACAT
CCTAGTAAATCAGAAAGATATACAGTAAATGAAGTTAATGATTCAAAAGCCGAGATCTTT
TGTGGACACAGTGAGAGACTAGCTATTGCATTTGGTCTTATAAATACAGCTCCAGGGACA
CCTATTTGGGTCACAAAGAATCTTTATATGTGCAAGAGCTGTCACGACACAATCAAGTTT
ATCTCTGAGGTTGTTCGGAGGGAGATTGCAGTTAGAGATACTGAGCAATTCCACCATTTT
AAGGATGGAAGATGCACATGTGGGGATGAAAACTATTTGGGAGAAACTTGA