Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014271
CDS Infomation

pacid=37445307 polypeptide=PGSC0003DMP400009854 locus=PGSC0003DMG400005597 ID=PGSC0003DMT400014271.v4.03 annot-version=v4.03
Sequence

ATGTCGATTGTGTTGGGAAGAAATAATTCAAGTGATCATCGGATCGAACCTTCTGGATTC
GCCACCCACGGAATGACGTCTATTCCGATCTATAACTCGCCGGAGTTCGGCATCGGAGAT
CCTCGGGACCAGGAGGACGATCGGAGTTCTTCTTTCTCATCTTCTTCCTCCTCTTCATCG
ATCGGAAGGAACAGTGATGACTCGCCGGCCGGTAGATCATCATCGGACGGGGATGGCGAA
GAAGTACAGAGTTCATTCAAACCTGGAGGTTTGGACAATTTGGAGACCTTAGAGGAGGTT
TTACCTATCAAGAGGAGCATATCAAAGTTTTATGCTGGTAAATCTAAATCTTTTACCAGT
CTAGCAGATGCGGCTTCAATTTCCTCTGTGAAAGAAATTGTCAAGCCAGAGGATGCATAC
ACCAGGAAACGCAAGAATCTGCTTGCTCACAACAATTTCTTTGGCAAAAATCGTAGTTAC
CTCCCAGGTATGGGTAATGGTGGGATTTACAAGAGACCGATCAACTCTAGAAGTTCATCA
GCTCTAGCTGCAAGTGTGAGCTGCTCCGACAGTAACTATAGTTCCAAGTCTTTGAACTCA
AGCCCATCATCGCCTTGTCTCTCTCGTCCTCCTCTTCCTCCGCAGACACGAAGGTATAGG
AATGAGTCGTCATTATCTCCTCCTGAACAAAAATTGAATGCATGGAGGTCTTTCTCCTTA
TCTGATCTGCAAGGTGCTGCTGCAACTCCCAGCTTAATGGGAATAAAGGAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400009854
PEP Infomation

pacid=37445307 transcript=PGSC0003DMT400014271 locus=PGSC0003DMG400005597 ID=PGSC0003DMT400014271.v4.03 annot-version=v4.03
Sequence

MSIVLGRNNSSDHRIEPSGFATHGMTSIPIYNSPEFGIGDPRDQEDDRSSSFSSSSSSSS
IGRNSDDSPAGRSSSDGDGEEVQSSFKPGGLDNLETLEEVLPIKRSISKFYAGKSKSFTS
LADAASISSVKEIVKPEDAYTRKRKNLLAHNNFFGKNRSYLPGMGNGGIYKRPINSRSSS
ALAASVSCSDSNYSSKSLNSSPSSPCLSRPPLPPQTRRYRNESSLSPPEQKLNAWRSFSL
SDLQGAAATPSLMGIKE*

Transcript Sequence

Transcript ID

PGSC0003DMT400014271
Transcript Infomation

pacid=37445307 locus=PGSC0003DMG400005597 ID=PGSC0003DMT400014271.v4.03 annot-version=v4.03
Sequence

ATGTCGATTGTGTTGGGAAGAAATAATTCAAGTGATCATCGGATCGAACCTTCTGGATTC
GCCACCCACGGAATGACGTCTATTCCGATCTATAACTCGCCGGAGTTCGGCATCGGAGAT
CCTCGGGACCAGGAGGACGATCGGAGTTCTTCTTTCTCATCTTCTTCCTCCTCTTCATCG
ATCGGAAGGAACAGTGATGACTCGCCGGCCGGTAGATCATCATCGGACGGGGATGGCGAA
GAAGTACAGAGTTCATTCAAACCTGGAGGTTTGGACAATTTGGAGACCTTAGAGGAGGTT
TTACCTATCAAGAGGAGCATATCAAAGTTTTATGCTGGTAAATCTAAATCTTTTACCAGT
CTAGCAGATGCGGCTTCAATTTCCTCTGTGAAAGAAATTGTCAAGCCAGAGGATGCATAC
ACCAGGAAACGCAAGAATCTGCTTGCTCACAACAATTTCTTTGGCAAAAATCGTAGTTAC
CTCCCAGGTATGGGTAATGGTGGGATTTACAAGAGACCGATCAACTCTAGAAGTTCATCA
GCTCTAGCTGCAAGTGTGAGCTGCTCCGACAGTAACTATAGTTCCAAGTCTTTGAACTCA
AGCCCATCATCGCCTTGTCTCTCTCGTCCTCCTCTTCCTCCGCAGACACGAAGGTATAGG
AATGAGTCGTCATTATCTCCTCCTGAACAAAAATTGAATGCATGGAGGTCTTTCTCCTTA
TCTGATCTGCAAGGTGCTGCTGCAACTCCCAGCTTAATGGGAATAAAGGAGTAA