Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014221
CDS Infomation

pacid=37459140 polypeptide=PGSC0003DMP400009823 locus=PGSC0003DMG401005575 ID=PGSC0003DMT400014221.v4.03 annot-version=v4.03
Sequence

ATGGGGGAAAAATTCAAAGCTCCATCAGTTTCGGTATCTTCACTTTCAACACTAACAATC
CCACCTAAAGCCCCTTTTGAATCATTTTTTGGTGTTGGAAATATACCCTATTTTAGTCCA
GGTCCAATGACCCTTGTCTCCAGTTTCTTCTCTGAATCTGAGTACCCATCTTTCTCCCAG
CTTCTTGCTGGAGCTATGGCTTCTCCACTAGCAAAACCGCCTACCCTTTTGCCTGAAAAT
TCATCTGGAGAAGAAGAGAATTGTAAACAAGGGAATTTAGGGTATAAGCAGAACCGACCC
ATGAATCTAATGGTGGCTCAATCTCCTTTCTTCACGATTCCAACCGCTTTTAGTCCTTCT
GGATTGCTTAATTCACCTGGATTTCTTTCCCCACTTCAGAGTCCTTTTGGAATGTCACAC
CAGCAGGCCCTAGCACATGTTACAGCACAGGCAGCGTTATCCCAGTCTTACTTACAAACT
CAAGCTGAATGCCATTTCTCCTCGCAAAGTACATCAGCACAGGTATTAGGGGCATCTGAC
CCAGAGGAATCTTCTTTACAACCTCAATTAGATACTATGTCGTCAGACCAGAAGATTAAG
AAATTTGAACTGCCACAGCTTTCTCAATCTGAGGACAAGCCATCCTTTAATTCAGTCGAT
AGACCAGCTTCTGATGGTTACAATTGGAGGAAGTATGGCCAGAAGATGGTTAAAGCAAGT
GAATGCCCTCGCAGCTACTATAAATGCACACATGTCAAATGTCCTGTCAAGAAGAAGGTT
GAGCGATCCATTGATGGTTACATAACTGAGATAACGTATAAAGGCCATCACAACCATGAA
CTTCCTCAACCTAACAAACGCAGAAGAGACAGTTGTGCTCAGGATGGTTCTGACTGCTCC
AACATTAACCCTGAAATTGGAACACATACTGAGATAGAAATCAACGGCTTAAATGGGGCT
CTTGTTGCTCATTCTGAACAGGTGTCTACTGAAATGGCGTGTGAACGTCCTGTTTCGAAT
GAATGTGAGGAAATTGAGGACGCTGCAACAGCAGCAGGCAAGGAACATGATGATGAACCA
AATGTGAAGAGAATGAAGACAACAGTTGAGACTCCTATTCTTTCATCATCACATAAAGCA
GAATCAGAATCCAAGATTGTTGTGCAGACAAGGAGTGAAGTAGACATTTTGGATGACGGG
TTCAAGTGGCGTAAATATGGGCAGAAAGTGGTGAAAGGGAATCATCATCCGAGGAGTTAT
TATCGTTGCACATACCCTGGATGCAATGTTCGCAAACATGTTGAGAGAGCTTCAGCAGAT
CCAAAAGCTGTCATAACAACGTATGAGGGCAAGCACAATCATGATATTCCCATTGCTAGA
AACAGAAGCCATAGCACAGCCCAAAATAGTAGTCGTCAGCTGAACGAGCAAGAGATTGCA
ACTTGTAGGCCTTCACTTCTCGAAAAAGTTGCTCTTCATACCAATGAAATACCAGTGTGT
AGGCAGCTGAAAGAGGAACATATTGCAGCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400009823
PEP Infomation

pacid=37459140 transcript=PGSC0003DMT400014221 locus=PGSC0003DMG401005575 ID=PGSC0003DMT400014221.v4.03 annot-version=v4.03
Sequence

MGEKFKAPSVSVSSLSTLTIPPKAPFESFFGVGNIPYFSPGPMTLVSSFFSESEYPSFSQ
LLAGAMASPLAKPPTLLPENSSGEEENCKQGNLGYKQNRPMNLMVAQSPFFTIPTAFSPS
GLLNSPGFLSPLQSPFGMSHQQALAHVTAQAALSQSYLQTQAECHFSSQSTSAQVLGASD
PEESSLQPQLDTMSSDQKIKKFELPQLSQSEDKPSFNSVDRPASDGYNWRKYGQKMVKAS
ECPRSYYKCTHVKCPVKKKVERSIDGYITEITYKGHHNHELPQPNKRRRDSCAQDGSDCS
NINPEIGTHTEIEINGLNGALVAHSEQVSTEMACERPVSNECEEIEDAATAAGKEHDDEP
NVKRMKTTVETPILSSSHKAESESKIVVQTRSEVDILDDGFKWRKYGQKVVKGNHHPRSY
YRCTYPGCNVRKHVERASADPKAVITTYEGKHNHDIPIARNRSHSTAQNSSRQLNEQEIA
TCRPSLLEKVALHTNEIPVCRQLKEEHIAA*

Transcript Sequence

Transcript ID

PGSC0003DMT400014221
Transcript Infomation

pacid=37459140 locus=PGSC0003DMG401005575 ID=PGSC0003DMT400014221.v4.03 annot-version=v4.03
Sequence

ATGGGGGAAAAATTCAAAGCTCCATCAGTTTCGGTATCTTCACTTTCAACACTAACAATC
CCACCTAAAGCCCCTTTTGAATCATTTTTTGGTGTTGGAAATATACCCTATTTTAGTCCA
GGTCCAATGACCCTTGTCTCCAGTTTCTTCTCTGAATCTGAGTACCCATCTTTCTCCCAG
CTTCTTGCTGGAGCTATGGCTTCTCCACTAGCAAAACCGCCTACCCTTTTGCCTGAAAAT
TCATCTGGAGAAGAAGAGAATTGTAAACAAGGGAATTTAGGGTATAAGCAGAACCGACCC
ATGAATCTAATGGTGGCTCAATCTCCTTTCTTCACGATTCCAACCGCTTTTAGTCCTTCT
GGATTGCTTAATTCACCTGGATTTCTTTCCCCACTTCAGAGTCCTTTTGGAATGTCACAC
CAGCAGGCCCTAGCACATGTTACAGCACAGGCAGCGTTATCCCAGTCTTACTTACAAACT
CAAGCTGAATGCCATTTCTCCTCGCAAAGTACATCAGCACAGGTATTAGGGGCATCTGAC
CCAGAGGAATCTTCTTTACAACCTCAATTAGATACTATGTCGTCAGACCAGAAGATTAAG
AAATTTGAACTGCCACAGCTTTCTCAATCTGAGGACAAGCCATCCTTTAATTCAGTCGAT
AGACCAGCTTCTGATGGTTACAATTGGAGGAAGTATGGCCAGAAGATGGTTAAAGCAAGT
GAATGCCCTCGCAGCTACTATAAATGCACACATGTCAAATGTCCTGTCAAGAAGAAGGTT
GAGCGATCCATTGATGGTTACATAACTGAGATAACGTATAAAGGCCATCACAACCATGAA
CTTCCTCAACCTAACAAACGCAGAAGAGACAGTTGTGCTCAGGATGGTTCTGACTGCTCC
AACATTAACCCTGAAATTGGAACACATACTGAGATAGAAATCAACGGCTTAAATGGGGCT
CTTGTTGCTCATTCTGAACAGGTGTCTACTGAAATGGCGTGTGAACGTCCTGTTTCGAAT
GAATGTGAGGAAATTGAGGACGCTGCAACAGCAGCAGGCAAGGAACATGATGATGAACCA
AATGTGAAGAGAATGAAGACAACAGTTGAGACTCCTATTCTTTCATCATCACATAAAGCA
GAATCAGAATCCAAGATTGTTGTGCAGACAAGGAGTGAAGTAGACATTTTGGATGACGGG
TTCAAGTGGCGTAAATATGGGCAGAAAGTGGTGAAAGGGAATCATCATCCGAGGAGTTAT
TATCGTTGCACATACCCTGGATGCAATGTTCGCAAACATGTTGAGAGAGCTTCAGCAGAT
CCAAAAGCTGTCATAACAACGTATGAGGGCAAGCACAATCATGATATTCCCATTGCTAGA
AACAGAAGCCATAGCACAGCCCAAAATAGTAGTCGTCAGCTGAACGAGCAAGAGATTGCA
ACTTGTAGGCCTTCACTTCTCGAAAAAGTTGCTCTTCATACCAATGAAATACCAGTGTGT
AGGCAGCTGAAAGAGGAACATATTGCAGCATAA