Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400014053
CDS Infomation

pacid=37461398 polypeptide=PGSC0003DMP400009711 locus=PGSC0003DMG400005508 ID=PGSC0003DMT400014053.v4.03 annot-version=v4.03
Sequence

ATGGGAAAGCTTTTGGTTAATGTTTTCCTAGTAACATTCTTGGTGTTTTTGGGGCATAAT
GTGGAAGGACTTGGGGTTAACTGGGGTGACATCTCCTCCCACAAGTTGCCTCCTAAAGAT
GTAGTCAAAATGTTGCAAGAAAATGGCATTAAGAAGGTGAAGCTTTTCAATAATGATGAG
ACCATCTTGAATGCCTTGGCTGGAACTGGCATTGAGGTCATGATTGGCATCTCTAATCAA
CTCCTCAAGGATTTGGTCAATCCTGATGTTGCCAAGAAATGGGTAAAAGAAAACGTCACA
CGCTATGAGCCTAAGTCTCCTAAAGGAGTTAATATCACACTTGTAGGTGTTGGTAATGAG
CCATTCTTGAGAGATTACAAGGATACATTGACAAATGTTACAGGGCCAGCATTAGAGAAT
ATCCAAAATGCACTGAATGATGCTGGACTTGGTGACACCACCAAGGCAACTGTACCTCTA
AATGCTGATGTTTACTTGTCACCAAGCTGGAATCCTGTACCTTCTGGGGGATTTTTTCGC
GCTGACATCATTGATCCACTCAACTCTATTCTTAAGGTGTTGAACAAGAATAAAGCTCCT
TTCATGGTCAATATTTATCCTTTTCTTAGTCTTTTCTATGGAAATGGTGCCTTCCCTTTT
GACTATGCCTTCTTTGATGGTGTGAGCAATCCTCTTAAGGACAAAGATGGTGTTGAATAC
ACCAACTGCTTTGATGCCAATCTTGACACTTGTGCAGCTGCTCTGGCTGGAGCAGGGTAT
GGCAACATGACCATTATGGTAGGAGAAATGGGATGGCCTACAGATGGAAACAATTATGGT
AATGTGACATTGGCTGAAAAGTTTTATAAAGGATTTGTATCATATCTTGCTAAAGGAAAA
GGTAGCCCACGTCGCCCTGGAAATGTTGAGGCATACCTATTTGCCTTATTTGATGAGGAT
AGGAAGAGCACACTCCCAGGAAACTTTGAGACACATTGGGGACTTTACTATGACGATGGA
ACGCCAAAGTTCCCTCTTGATTTACATGGAAATAAAAAGACTCTTGTCTCCGTGCCAAAT
GTAGAAAAACTCTCCAAAAAATGGTGTGTGATCAAGCCGGATGTTAAGAATTTTACAGAT
CTTATGACATATGCTTGTGACCGCGCAGATTGTACACCTCTTACTAATGGATCATCTTGC
CAAAACCTTAATGACGCTGCCAAGGCTTCATACGCCGTGAATGCCTATTTCCAAAACAAC
CAACAAAAAGATGATACTTGTAATTTTGAAGGCAAGGCAACAGTAACCACAAAGGATCCA
TCTCAAGGGACTTGCAATTTCACCATTGGCTTCAAGTCACTTACTTCTCTTTCTCCTTCT
CCTTCCCCTCTTCCTTCTTCCGATCACTCAGACGCTAAGGCTCCTTCATCATCATCATCA
TCAACTTCTCCTTCAACTCCAAAAATTTTAGCCTTTGCTTCCATGGGAATCTCTTTTCTT
GTTTCACTATTTTTCATGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400009711
PEP Infomation

pacid=37461398 transcript=PGSC0003DMT400014053 locus=PGSC0003DMG400005508 ID=PGSC0003DMT400014053.v4.03 annot-version=v4.03
Sequence

MGKLLVNVFLVTFLVFLGHNVEGLGVNWGDISSHKLPPKDVVKMLQENGIKKVKLFNNDE
TILNALAGTGIEVMIGISNQLLKDLVNPDVAKKWVKENVTRYEPKSPKGVNITLVGVGNE
PFLRDYKDTLTNVTGPALENIQNALNDAGLGDTTKATVPLNADVYLSPSWNPVPSGGFFR
ADIIDPLNSILKVLNKNKAPFMVNIYPFLSLFYGNGAFPFDYAFFDGVSNPLKDKDGVEY
TNCFDANLDTCAAALAGAGYGNMTIMVGEMGWPTDGNNYGNVTLAEKFYKGFVSYLAKGK
GSPRRPGNVEAYLFALFDEDRKSTLPGNFETHWGLYYDDGTPKFPLDLHGNKKTLVSVPN
VEKLSKKWCVIKPDVKNFTDLMTYACDRADCTPLTNGSSCQNLNDAAKASYAVNAYFQNN
QQKDDTCNFEGKATVTTKDPSQGTCNFTIGFKSLTSLSPSPSPLPSSDHSDAKAPSSSSS
STSPSTPKILAFASMGISFLVSLFFM*

Transcript Sequence

Transcript ID

PGSC0003DMT400014053
Transcript Infomation

pacid=37461398 locus=PGSC0003DMG400005508 ID=PGSC0003DMT400014053.v4.03 annot-version=v4.03
Sequence

ATGGGAAAGCTTTTGGTTAATGTTTTCCTAGTAACATTCTTGGTGTTTTTGGGGCATAAT
GTGGAAGGACTTGGGGTTAACTGGGGTGACATCTCCTCCCACAAGTTGCCTCCTAAAGAT
GTAGTCAAAATGTTGCAAGAAAATGGCATTAAGAAGGTGAAGCTTTTCAATAATGATGAG
ACCATCTTGAATGCCTTGGCTGGAACTGGCATTGAGGTCATGATTGGCATCTCTAATCAA
CTCCTCAAGGATTTGGTCAATCCTGATGTTGCCAAGAAATGGGTAAAAGAAAACGTCACA
CGCTATGAGCCTAAGTCTCCTAAAGGAGTTAATATCACACTTGTAGGTGTTGGTAATGAG
CCATTCTTGAGAGATTACAAGGATACATTGACAAATGTTACAGGGCCAGCATTAGAGAAT
ATCCAAAATGCACTGAATGATGCTGGACTTGGTGACACCACCAAGGCAACTGTACCTCTA
AATGCTGATGTTTACTTGTCACCAAGCTGGAATCCTGTACCTTCTGGGGGATTTTTTCGC
GCTGACATCATTGATCCACTCAACTCTATTCTTAAGGTGTTGAACAAGAATAAAGCTCCT
TTCATGGTCAATATTTATCCTTTTCTTAGTCTTTTCTATGGAAATGGTGCCTTCCCTTTT
GACTATGCCTTCTTTGATGGTGTGAGCAATCCTCTTAAGGACAAAGATGGTGTTGAATAC
ACCAACTGCTTTGATGCCAATCTTGACACTTGTGCAGCTGCTCTGGCTGGAGCAGGGTAT
GGCAACATGACCATTATGGTAGGAGAAATGGGATGGCCTACAGATGGAAACAATTATGGT
AATGTGACATTGGCTGAAAAGTTTTATAAAGGATTTGTATCATATCTTGCTAAAGGAAAA
GGTAGCCCACGTCGCCCTGGAAATGTTGAGGCATACCTATTTGCCTTATTTGATGAGGAT
AGGAAGAGCACACTCCCAGGAAACTTTGAGACACATTGGGGACTTTACTATGACGATGGA
ACGCCAAAGTTCCCTCTTGATTTACATGGAAATAAAAAGACTCTTGTCTCCGTGCCAAAT
GTAGAAAAACTCTCCAAAAAATGGTGTGTGATCAAGCCGGATGTTAAGAATTTTACAGAT
CTTATGACATATGCTTGTGACCGCGCAGATTGTACACCTCTTACTAATGGATCATCTTGC
CAAAACCTTAATGACGCTGCCAAGGCTTCATACGCCGTGAATGCCTATTTCCAAAACAAC
CAACAAAAAGATGATACTTGTAATTTTGAAGGCAAGGCAACAGTAACCACAAAGGATCCA
TCTCAAGGGACTTGCAATTTCACCATTGGCTTCAAGTCACTTACTTCTCTTTCTCCTTCT
CCTTCCCCTCTTCCTTCTTCCGATCACTCAGACGCTAAGGCTCCTTCATCATCATCATCA
TCAACTTCTCCTTCAACTCCAAAAATTTTAGCCTTTGCTTCCATGGGAATCTCTTTTCTT
GTTTCACTATTTTTCATGTAG