Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013990
CDS Infomation

pacid=37434104 polypeptide=PGSC0003DMP400009671 locus=PGSC0003DMG400005484 ID=PGSC0003DMT400013990.v4.03 annot-version=v4.03
Sequence

ATGAGATACGTTCGTACAAGTAGCCTTAAAAGGCTCTTCTCATTCAGAAGGCAGAGTTTT
GATGGTGAATTACCAAAACCTTGTGATTTCAATCAAGAAGAAGTTGCTGCTACACGTAAA
CCCACTTGGAAATGCTTCTCTTTTCAAGAAATTTTTCATGCCACCAATGGTTTCAATTCA
GAAAATATTGTTGGTCGAGGAGGGTATGCATCGGTGTACAGAGGCATATTAGAAACTGGA
GAAGCAATAGCAGTAAAAATGCTTACAAAAGCGACCGACGATGAAAGAAAAGAAAAGGAA
TTTTTGACAGAAATTGGTACACTTGGTCACGTTTGTCATCCAAATGTAACGTCACTGCTT
GGCTGTTGTATTGAAAATGGACTTTACATCATTTTTCAGTTTTCATCCAAAGGATCTGTT
GCTTCAATTCTCCATGATGAGAAATCACCCACTATGGATTGGGAAACAAGGTATAAAATT
GCTGTTGGGACTGCAAAGGGTTTATATTATCTGCATAAATTATGTCCTAGAAGAATTATT
CATAGGGATATCAAGGCCTCTAATATTTTGTTGAGTGAAGAATATGAGCCACAGATATCA
GATTTTGGGCTAGCAAAATGGCTTCCATCACAATGGACCCATCATTCTATTGTTCCAATT
GAAGGGACTTTTGGGCATTTAGCACCAGAATATTTCATGCATGGAGTAGTTGATGAAAAG
ACAGATGTTTTTGCATTTGGAGTGTTCTGTTTGGAGCTCATTTCTGGAAAAAAACCTGTT
GACAATTCCTATCAAAGCTTACATAGTTGGGCAAAACCTTTATTGAGCAGAGGAGTTATA
GAAGAAGTAGTTGATCCAATGCTACAAGGGACATTTGATTCTACACAACTTCATAAACTT
GCCTTTGCTGCTGCTCTTTGCATTCGTGCTTCTTCTATATGGCGCCCTACCATGAGTGAG
ATTGTAGAGATAATATTGGGAGGTGAAGTTGATAAACAAAAATGGAAAATGCCAGAAGAG
GAAGAAGAAGAACAAGAAGAGTTTTGGGGTTTTGAGGATCTTGAATGTGAATGTGATAGT
TCCTTCTCAACTTCCCCACATGACACATTCTCAACAAGAAGCTCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400009671
PEP Infomation

pacid=37434104 transcript=PGSC0003DMT400013990 locus=PGSC0003DMG400005484 ID=PGSC0003DMT400013990.v4.03 annot-version=v4.03
Sequence

MRYVRTSSLKRLFSFRRQSFDGELPKPCDFNQEEVAATRKPTWKCFSFQEIFHATNGFNS
ENIVGRGGYASVYRGILETGEAIAVKMLTKATDDERKEKEFLTEIGTLGHVCHPNVTSLL
GCCIENGLYIIFQFSSKGSVASILHDEKSPTMDWETRYKIAVGTAKGLYYLHKLCPRRII
HRDIKASNILLSEEYEPQISDFGLAKWLPSQWTHHSIVPIEGTFGHLAPEYFMHGVVDEK
TDVFAFGVFCLELISGKKPVDNSYQSLHSWAKPLLSRGVIEEVVDPMLQGTFDSTQLHKL
AFAAALCIRASSIWRPTMSEIVEIILGGEVDKQKWKMPEEEEEEQEEFWGFEDLECECDS
SFSTSPHDTFSTRSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400013990
Transcript Infomation

pacid=37434104 locus=PGSC0003DMG400005484 ID=PGSC0003DMT400013990.v4.03 annot-version=v4.03
Sequence

ATGAGATACGTTCGTACAAGTAGCCTTAAAAGGCTCTTCTCATTCAGAAGGCAGAGTTTT
GATGGTGAATTACCAAAACCTTGTGATTTCAATCAAGAAGAAGTTGCTGCTACACGTAAA
CCCACTTGGAAATGCTTCTCTTTTCAAGAAATTTTTCATGCCACCAATGGTTTCAATTCA
GAAAATATTGTTGGTCGAGGAGGGTATGCATCGGTGTACAGAGGCATATTAGAAACTGGA
GAAGCAATAGCAGTAAAAATGCTTACAAAAGCGACCGACGATGAAAGAAAAGAAAAGGAA
TTTTTGACAGAAATTGGTACACTTGGTCACGTTTGTCATCCAAATGTAACGTCACTGCTT
GGCTGTTGTATTGAAAATGGACTTTACATCATTTTTCAGTTTTCATCCAAAGGATCTGTT
GCTTCAATTCTCCATGATGAGAAATCACCCACTATGGATTGGGAAACAAGGTATAAAATT
GCTGTTGGGACTGCAAAGGGTTTATATTATCTGCATAAATTATGTCCTAGAAGAATTATT
CATAGGGATATCAAGGCCTCTAATATTTTGTTGAGTGAAGAATATGAGCCACAGATATCA
GATTTTGGGCTAGCAAAATGGCTTCCATCACAATGGACCCATCATTCTATTGTTCCAATT
GAAGGGACTTTTGGGCATTTAGCACCAGAATATTTCATGCATGGAGTAGTTGATGAAAAG
ACAGATGTTTTTGCATTTGGAGTGTTCTGTTTGGAGCTCATTTCTGGAAAAAAACCTGTT
GACAATTCCTATCAAAGCTTACATAGTTGGGCAAAACCTTTATTGAGCAGAGGAGTTATA
GAAGAAGTAGTTGATCCAATGCTACAAGGGACATTTGATTCTACACAACTTCATAAACTT
GCCTTTGCTGCTGCTCTTTGCATTCGTGCTTCTTCTATATGGCGCCCTACCATGAGTGAG
ATTGTAGAGATAATATTGGGAGGTGAAGTTGATAAACAAAAATGGAAAATGCCAGAAGAG
GAAGAAGAAGAACAAGAAGAGTTTTGGGGTTTTGAGGATCTTGAATGTGAATGTGATAGT
TCCTTCTCAACTTCCCCACATGACACATTCTCAACAAGAAGCTCATAA