Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013977
CDS Infomation

pacid=37463446 polypeptide=PGSC0003DMP400009660 locus=PGSC0003DMG400005479 ID=PGSC0003DMT400013977.v4.03 annot-version=v4.03
Sequence

ATGTCTGAAATTAGAGGAAATAAAGTTACCTTTAATCCAAACAAGCTTGTCCTTACGGCC
GGCGCTACTTCCGCAAATGAGACGCTCATGTTTTGCCTCGCCAACCCGGGCGACGCTTTT
CTCCTTCCTACCCCTTACTACCCCGGATTTGATCGAGACTTAAAATGGAGGACCGGGGCT
GAAATAGTTCCAATACAATGTACAAGTTCAAATGGTTTTCGAATTACACAATCCGCTCTT
GAAGAATCTTATAAATTAGCGAAAACTCGCAACCTTAGAGTTAAAGGGGTGCTAGTGACT
AACCCATCGAACCCATTGGGCACGGCATTAACACGTAACGAACTCGAGCTACTTGTTAGC
TTCGTTGCGGAAAAGGGGATTCATCTTATTAGCGATGAAATATATTCAGGCACGGTTTTT
AACTCGCCTAAATTCGTTAGTGTTATGGAAGTATTAATCGAAAATAATTACATGTATACT
GAAGTTTGGGACCGAGTTCATATTGTCTATAGCCTTTCGAAAGATTTAGGCCTTCCCGGT
TTCCGAATCGGGGCGATTTACACGAACGACGAGGTTATTGTCTCCGCGGCTACAAAAATG
TCGAGTTTTGGGTTAATTTCTTCGCAAACTCAATATCTTTTATCGGCTATGTTAGCCGAT
AAAAAGTTTACGAAGAAATACATCTCCGAAAATCAAAAGAGGCTCAAGAAAAGACATGCA
ATGTTAGTGAAAGGACTTGAGAGTACTGGAATTAGTTGTCTTGAGAGCAATGCCGGTTTA
TTTTGTTGGGTAGATATGAGACATTTATTAAAGACCAATACATTTGAGGCAGAAATTGAG
CTATGGAAGAAAATAGTTTATGAAGTTAAGCTTAATATTTCGCCCGGATCGTCATGCCAT
TGTACTGAACCGGGTTGGTTTCGTGCATGTTTTGCGAACATGTCAGAAGATACATTGAAT
CTCGCGATTCAACGTATTAAAATTTTTGTTGATTCCTCTGATGTGATTGGTACCAATATT
GACCAAAGTAATCAGACTAATCAGAATACAAGTACAAGTCTAAAGAAGAAGTTATTTGCC
AAGTGGGGTTTTCGGCTATCATTCAACGACAGAGAACGATAG

Peptide Sequence

PEP ID

PGSC0003DMP400009660
PEP Infomation

pacid=37463446 transcript=PGSC0003DMT400013977 locus=PGSC0003DMG400005479 ID=PGSC0003DMT400013977.v4.03 annot-version=v4.03
Sequence

MSEIRGNKVTFNPNKLVLTAGATSANETLMFCLANPGDAFLLPTPYYPGFDRDLKWRTGA
EIVPIQCTSSNGFRITQSALEESYKLAKTRNLRVKGVLVTNPSNPLGTALTRNELELLVS
FVAEKGIHLISDEIYSGTVFNSPKFVSVMEVLIENNYMYTEVWDRVHIVYSLSKDLGLPG
FRIGAIYTNDEVIVSAATKMSSFGLISSQTQYLLSAMLADKKFTKKYISENQKRLKKRHA
MLVKGLESTGISCLESNAGLFCWVDMRHLLKTNTFEAEIELWKKIVYEVKLNISPGSSCH
CTEPGWFRACFANMSEDTLNLAIQRIKIFVDSSDVIGTNIDQSNQTNQNTSTSLKKKLFA
KWGFRLSFNDRER*

Transcript Sequence

Transcript ID

PGSC0003DMT400013977
Transcript Infomation

pacid=37463446 locus=PGSC0003DMG400005479 ID=PGSC0003DMT400013977.v4.03 annot-version=v4.03
Sequence

ATGTCTGAAATTAGAGGAAATAAAGTTACCTTTAATCCAAACAAGCTTGTCCTTACGGCC
GGCGCTACTTCCGCAAATGAGACGCTCATGTTTTGCCTCGCCAACCCGGGCGACGCTTTT
CTCCTTCCTACCCCTTACTACCCCGGATTTGATCGAGACTTAAAATGGAGGACCGGGGCT
GAAATAGTTCCAATACAATGTACAAGTTCAAATGGTTTTCGAATTACACAATCCGCTCTT
GAAGAATCTTATAAATTAGCGAAAACTCGCAACCTTAGAGTTAAAGGGGTGCTAGTGACT
AACCCATCGAACCCATTGGGCACGGCATTAACACGTAACGAACTCGAGCTACTTGTTAGC
TTCGTTGCGGAAAAGGGGATTCATCTTATTAGCGATGAAATATATTCAGGCACGGTTTTT
AACTCGCCTAAATTCGTTAGTGTTATGGAAGTATTAATCGAAAATAATTACATGTATACT
GAAGTTTGGGACCGAGTTCATATTGTCTATAGCCTTTCGAAAGATTTAGGCCTTCCCGGT
TTCCGAATCGGGGCGATTTACACGAACGACGAGGTTATTGTCTCCGCGGCTACAAAAATG
TCGAGTTTTGGGTTAATTTCTTCGCAAACTCAATATCTTTTATCGGCTATGTTAGCCGAT
AAAAAGTTTACGAAGAAATACATCTCCGAAAATCAAAAGAGGCTCAAGAAAAGACATGCA
ATGTTAGTGAAAGGACTTGAGAGTACTGGAATTAGTTGTCTTGAGAGCAATGCCGGTTTA
TTTTGTTGGGTAGATATGAGACATTTATTAAAGACCAATACATTTGAGGCAGAAATTGAG
CTATGGAAGAAAATAGTTTATGAAGTTAAGCTTAATATTTCGCCCGGATCGTCATGCCAT
TGTACTGAACCGGGTTGGTTTCGTGCATGTTTTGCGAACATGTCAGAAGATACATTGAAT
CTCGCGATTCAACGTATTAAAATTTTTGTTGATTCCTCTGATGTGATTGGTACCAATATT
GACCAAAGTAATCAGACTAATCAGAATACAAGTACAAGTCTAAAGAAGAAGTTATTTGCC
AAGTGGGGTTTTCGGCTATCATTCAACGACAGAGAACGATAG