Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013965
CDS Infomation

pacid=37453922 polypeptide=PGSC0003DMP400009652 locus=PGSC0003DMG400005470 ID=PGSC0003DMT400013965.v4.03 annot-version=v4.03
Sequence

ATGAAAGCTCTCAAACGAAGTCAGACTCCATCGTCTTCAAATTCACCTTCACCTTCTTCA
AATTCACCATCGTCGTCGACGGCGACGGCGACGGCGACGGCGGCGTCATCATCCTCCTGG
ATTCATTTGAGATCAGTTCTATTTGTCGTTGCGTCCTCCTCACCAGCTTACTGTGCTTCA
TCTGATCGAGGTCATCTCAAATCACCATGGTCTCGTAGAAAGAGAAAACATGTCCTTGCA
CCCCTGCGGTGGAGAAGCTTTTTTACCCCCGATGGAAAGCTTCGTAATGGAGGAGTTAAA
TTTCTGAAGAAAGTTCGAAGTGGAGGAGTTGATCCTAGCATCAGGGCGGAGGTTTGGCCT
TTTCTCCTCGGGGTCTATGAATTGGACAGTTCCAAAAAAGAAAGAGACACTGTAAGAAAA
AAGAACAGAAAGGAATATGTGATGCTTCGGAGGAAGTGCTGCCAACTACTGAGACACAAT
AGTGAAACCTTTAAAATGAAAGTGACGGGTGGAATTGGAAACAATGGAGACAGTGGAAAT
CTCATGGAAGGAATGGATTTTCCCGATTATGAAGATGTCAGTGCCCTGGAATCCCTCTCT
AGTGGGGACCAGAGCCCATTTGTTGAGGATTCAGACAGTCACAGCAATTTAATGTTGGAT
GAATTTTCTAGTTCCAAACGAGCCATGGAGCCAAATGATGTCTCTGACTCTGAGTCGTCA
GATTCTGATTCCTCTGCAGATCATGATGTGCATCATAGTTTTCTCTCTATAAGAAGCATG
CATGATACAGCTGAAGTGCATTCCAAGGAGGACTCTTCTCCTTCAAAGACAGAAGTCCAG
CCACAGCCCTGCAATGCAGAAGATTTTGCTACATGGCAACGAATAATTCGGGTTGATGCA
GTTCGTGCTAATGAAGAATGGATAGCATATTCCACACCTCAGGCTGGAGTAGTATCAGAT
GGCCGGGCACACTGTTCTGCGCAGGCTGTTGGACTGAAGGACTATGATCACCTCGAGCCC
TCAAGGATCTTCCATGCTGCTCGGTTAGTTGCCATCCTTGAAGCCTATGCGCTTTATGAC
CCTGAAATTGGCTATTGCCAGGGAATGAGTGATTTGCTTTCACCAATAATTACTGTGATG
ACAGAGGACCATGAAGCTTTTTGGTGCTTCGTTGGTTTCATGAGGAAGGCACGACATAAC
TTCAGGCTTGATGAGGTTGGAATCAGGAGGCAACTAAATATTATTTCTAAGATTATCAAA
CATAAGGATTCACATCTCTATAGGCACTTAGAGAAGCTTCAAGCAGAGGATTGTTTTTTT
GTGTACAGGATGGTGGTAGTGCTCTTCAGGAGGGAATTAACTTTTGAGCAAACACTCTGC
CTATGGGAGGTAATGTGGGCAGACCAGGTCGCTATTAGGGCTGGGATTGGGAAGTCTGCA
TGGAGTAGGATTAGGCAGCGTGCTCCACCAACAGATGATCTTTTGCTTTATGCAATTGCA
GCATCTGTATTACAGAGGAGGAAACAAATCACTGAGAAGTATAGTAGCATGGATGAAATT
TTAAGGGAGTGCAATAACATGGCTGGTCATCTTGATGTATGGAAGCTACTAGATGATGCC
CATGATTTGGTGGTGACTCTCCATGACAAGATATAG

Peptide Sequence

PEP ID

PGSC0003DMP400009652
PEP Infomation

pacid=37453922 transcript=PGSC0003DMT400013965 locus=PGSC0003DMG400005470 ID=PGSC0003DMT400013965.v4.03 annot-version=v4.03
Sequence

MKALKRSQTPSSSNSPSPSSNSPSSSTATATATAASSSSWIHLRSVLFVVASSSPAYCAS
SDRGHLKSPWSRRKRKHVLAPLRWRSFFTPDGKLRNGGVKFLKKVRSGGVDPSIRAEVWP
FLLGVYELDSSKKERDTVRKKNRKEYVMLRRKCCQLLRHNSETFKMKVTGGIGNNGDSGN
LMEGMDFPDYEDVSALESLSSGDQSPFVEDSDSHSNLMLDEFSSSKRAMEPNDVSDSESS
DSDSSADHDVHHSFLSIRSMHDTAEVHSKEDSSPSKTEVQPQPCNAEDFATWQRIIRVDA
VRANEEWIAYSTPQAGVVSDGRAHCSAQAVGLKDYDHLEPSRIFHAARLVAILEAYALYD
PEIGYCQGMSDLLSPIITVMTEDHEAFWCFVGFMRKARHNFRLDEVGIRRQLNIISKIIK
HKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELTFEQTLCLWEVMWADQVAIRAGIGKSA
WSRIRQRAPPTDDLLLYAIAASVLQRRKQITEKYSSMDEILRECNNMAGHLDVWKLLDDA
HDLVVTLHDKI*

Transcript Sequence

Transcript ID

PGSC0003DMT400013965
Transcript Infomation

pacid=37453922 locus=PGSC0003DMG400005470 ID=PGSC0003DMT400013965.v4.03 annot-version=v4.03
Sequence

ATGAAAGCTCTCAAACGAAGTCAGACTCCATCGTCTTCAAATTCACCTTCACCTTCTTCA
AATTCACCATCGTCGTCGACGGCGACGGCGACGGCGACGGCGGCGTCATCATCCTCCTGG
ATTCATTTGAGATCAGTTCTATTTGTCGTTGCGTCCTCCTCACCAGCTTACTGTGCTTCA
TCTGATCGAGGTCATCTCAAATCACCATGGTCTCGTAGAAAGAGAAAACATGTCCTTGCA
CCCCTGCGGTGGAGAAGCTTTTTTACCCCCGATGGAAAGCTTCGTAATGGAGGAGTTAAA
TTTCTGAAGAAAGTTCGAAGTGGAGGAGTTGATCCTAGCATCAGGGCGGAGGTTTGGCCT
TTTCTCCTCGGGGTCTATGAATTGGACAGTTCCAAAAAAGAAAGAGACACTGTAAGAAAA
AAGAACAGAAAGGAATATGTGATGCTTCGGAGGAAGTGCTGCCAACTACTGAGACACAAT
AGTGAAACCTTTAAAATGAAAGTGACGGGTGGAATTGGAAACAATGGAGACAGTGGAAAT
CTCATGGAAGGAATGGATTTTCCCGATTATGAAGATGTCAGTGCCCTGGAATCCCTCTCT
AGTGGGGACCAGAGCCCATTTGTTGAGGATTCAGACAGTCACAGCAATTTAATGTTGGAT
GAATTTTCTAGTTCCAAACGAGCCATGGAGCCAAATGATGTCTCTGACTCTGAGTCGTCA
GATTCTGATTCCTCTGCAGATCATGATGTGCATCATAGTTTTCTCTCTATAAGAAGCATG
CATGATACAGCTGAAGTGCATTCCAAGGAGGACTCTTCTCCTTCAAAGACAGAAGTCCAG
CCACAGCCCTGCAATGCAGAAGATTTTGCTACATGGCAACGAATAATTCGGGTTGATGCA
GTTCGTGCTAATGAAGAATGGATAGCATATTCCACACCTCAGGCTGGAGTAGTATCAGAT
GGCCGGGCACACTGTTCTGCGCAGGCTGTTGGACTGAAGGACTATGATCACCTCGAGCCC
TCAAGGATCTTCCATGCTGCTCGGTTAGTTGCCATCCTTGAAGCCTATGCGCTTTATGAC
CCTGAAATTGGCTATTGCCAGGGAATGAGTGATTTGCTTTCACCAATAATTACTGTGATG
ACAGAGGACCATGAAGCTTTTTGGTGCTTCGTTGGTTTCATGAGGAAGGCACGACATAAC
TTCAGGCTTGATGAGGTTGGAATCAGGAGGCAACTAAATATTATTTCTAAGATTATCAAA
CATAAGGATTCACATCTCTATAGGCACTTAGAGAAGCTTCAAGCAGAGGATTGTTTTTTT
GTGTACAGGATGGTGGTAGTGCTCTTCAGGAGGGAATTAACTTTTGAGCAAACACTCTGC
CTATGGGAGGTAATGTGGGCAGACCAGGTCGCTATTAGGGCTGGGATTGGGAAGTCTGCA
TGGAGTAGGATTAGGCAGCGTGCTCCACCAACAGATGATCTTTTGCTTTATGCAATTGCA
GCATCTGTATTACAGAGGAGGAAACAAATCACTGAGAAGTATAGTAGCATGGATGAAATT
TTAAGGGAGTGCAATAACATGGCTGGTCATCTTGATGTATGGAAGCTACTAGATGATGCC
CATGATTTGGTGGTGACTCTCCATGACAAGATATAG