Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013928
CDS Infomation

pacid=37480330 polypeptide=PGSC0003DMP400009623 locus=PGSC0003DMG400005453 ID=PGSC0003DMT400013928.v4.03 annot-version=v4.03
Sequence

ATGAAGTTTATGAAACTTGGATCCAAACCTGATACATTTCAGTCAGATGGGAAAAATGTC
AGATATGTTGCTTCAGAGTTGGATTCTGACATCGTTGTTAGTGTAGGAGACGTTAAGTTT
CATCTGCATAAGTTTCCTCTTCTGTCCAAGAGTGCTCATTTGCAAAAGCTGGTTACAAAC
TCAAGTGAAGGAGATGGTGATGAAGTTCACATTCATGACGTTCCGGGAGGACCTACTGCC
TTTGAAATGTGTGTCAAGTTTTGTTACGGTATGACCGTTACACTGAATGCTTATAATGTC
ATAGCAGCAAGGTGCGCTGCAGAGTATCTTGGAATGGATGAGACTGTTGAGAAAGGAAAT
CTTATTTACAAGATTGATGTTTTCTTACACTCGACCATTTTCCGAAGCTGGAAAGATTCG
ATAATATTTCTTCAGACCACTAAATCTAGGTTACATCTGTGTGAGGAAGTAAAGTTGATC
AGCCACTGTACTGATGCTATAGCATCCAAGACGTCTATTGATGTTCGCAAGGTTGATTGG
TCTTATACCTATAACCGGACCAAGATACAAGAGGAAAATGGAAGTGGTCCTAACTCAAAT
GGAATTAGAAGCCGTGTGGTGCCAAATGATTGGTGGGTTGATGACTTATGTGAGCTTGAA
ATAGATCTTTATAAACGGGTTATGGTCAACATAAAGAACAAAGGGATTGTTTCCTCTGAA
GTGATTGGAGAAGGTATTAAAGCTTATACTTTAAGAAGGTTCCCGGGCTTTAGCAAGGGT
GTTTGCCAGTTCAGTGATGTGTCCAGATCGCGCTCAATATTGGATACGGTTGTATGTCTA
TTACCTGCTGAAAAAGGTAGTGTCTCTTGTAGTTTCTTGTTGAAATTGCTAAAAGCATCC
ATTTCTGTAGATTCTGGAGAAAAGGTAAAGGCAGAGCTAGTAAAAAGAATAGGGCAGCAA
CTGGAGGAGGCTTCTGTCAATGGTCTTTTGATTCGAGCTACAGACGGGGAAGCAACAATG
TATGATGTCCATGTCTTCCACAAGATACTAGAGAACTTTGTTGTGCATAATAAGGATTTG
AAAACTCAGTTTGAAGATGGTAATGAAATTCCAGGGGTTTTATCAGAAGCTTCAAAGCTC
ATGGTGGCGAAGCTAGTAGATGGATACCTTACAGAAATTGCCAAGGATCCTAATCTTCCT
TTGTCGACATTTGTTGGTCTAGCAGAGATGGTAACAGATTTCCCTCGCCCTAGTCATGAC
AGCCTTTATCGGGCAATTGATATATACCTCAAGGAGCACCCTGGGATCAGCAAGAATGAC
AGAAAGAGAATTTGCTGTCTGATGGATTGCAAGAAGCTCTCAGTTGATGCATGTACACAT
GCCGTGCAAAACGAGAGACTTCCATCACGTGTTGTCGTACAAGTTCTCTTCTTTGAGCAA
GTCAGGGCCAATGCATCATCGGGGAGCAGCACTCCGGATCTTCCCAAAGCTATTAGAAAC
CTCACTAGTGCTTCATATGCGAGCTCAAGGTCAGCGACAACAAATACAGAGAATTCGGAG
GTTACAGCCTCTGCAGAAGAACTGAGGGCTTTGAAAGAAGAGCTGGCAGCCTTAAGATTG
GCAAATGGAGGACTAAATGGCGATACCAAACGTCACGTTGACAAGGCTGCCAATGGTAGA
ATGAAAAGTATACTTTCATCAAAGAAGATCTTTACAAAAATTTGGTCAAGCAAAGGCAGG
AAACAAGGGGAAAATAGTGGCTCAGATTCATCTGACAGCTTGGAAGAAGCTAAGTACACA
CCTTCAAGAAAAGGAAGATATTCAGTTTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400009623
PEP Infomation

pacid=37480330 transcript=PGSC0003DMT400013928 locus=PGSC0003DMG400005453 ID=PGSC0003DMT400013928.v4.03 annot-version=v4.03
Sequence

MKFMKLGSKPDTFQSDGKNVRYVASELDSDIVVSVGDVKFHLHKFPLLSKSAHLQKLVTN
SSEGDGDEVHIHDVPGGPTAFEMCVKFCYGMTVTLNAYNVIAARCAAEYLGMDETVEKGN
LIYKIDVFLHSTIFRSWKDSIIFLQTTKSRLHLCEEVKLISHCTDAIASKTSIDVRKVDW
SYTYNRTKIQEENGSGPNSNGIRSRVVPNDWWVDDLCELEIDLYKRVMVNIKNKGIVSSE
VIGEGIKAYTLRRFPGFSKGVCQFSDVSRSRSILDTVVCLLPAEKGSVSCSFLLKLLKAS
ISVDSGEKVKAELVKRIGQQLEEASVNGLLIRATDGEATMYDVHVFHKILENFVVHNKDL
KTQFEDGNEIPGVLSEASKLMVAKLVDGYLTEIAKDPNLPLSTFVGLAEMVTDFPRPSHD
SLYRAIDIYLKEHPGISKNDRKRICCLMDCKKLSVDACTHAVQNERLPSRVVVQVLFFEQ
VRANASSGSSTPDLPKAIRNLTSASYASSRSATTNTENSEVTASAEELRALKEELAALRL
ANGGLNGDTKRHVDKAANGRMKSILSSKKIFTKIWSSKGRKQGENSGSDSSDSLEEAKYT
PSRKGRYSVS*

Transcript Sequence

Transcript ID

PGSC0003DMT400013928
Transcript Infomation

pacid=37480330 locus=PGSC0003DMG400005453 ID=PGSC0003DMT400013928.v4.03 annot-version=v4.03
Sequence

ATGAAGTTTATGAAACTTGGATCCAAACCTGATACATTTCAGTCAGATGGGAAAAATGTC
AGATATGTTGCTTCAGAGTTGGATTCTGACATCGTTGTTAGTGTAGGAGACGTTAAGTTT
CATCTGCATAAGTTTCCTCTTCTGTCCAAGAGTGCTCATTTGCAAAAGCTGGTTACAAAC
TCAAGTGAAGGAGATGGTGATGAAGTTCACATTCATGACGTTCCGGGAGGACCTACTGCC
TTTGAAATGTGTGTCAAGTTTTGTTACGGTATGACCGTTACACTGAATGCTTATAATGTC
ATAGCAGCAAGGTGCGCTGCAGAGTATCTTGGAATGGATGAGACTGTTGAGAAAGGAAAT
CTTATTTACAAGATTGATGTTTTCTTACACTCGACCATTTTCCGAAGCTGGAAAGATTCG
ATAATATTTCTTCAGACCACTAAATCTAGGTTACATCTGTGTGAGGAAGTAAAGTTGATC
AGCCACTGTACTGATGCTATAGCATCCAAGACGTCTATTGATGTTCGCAAGGTTGATTGG
TCTTATACCTATAACCGGACCAAGATACAAGAGGAAAATGGAAGTGGTCCTAACTCAAAT
GGAATTAGAAGCCGTGTGGTGCCAAATGATTGGTGGGTTGATGACTTATGTGAGCTTGAA
ATAGATCTTTATAAACGGGTTATGGTCAACATAAAGAACAAAGGGATTGTTTCCTCTGAA
GTGATTGGAGAAGGTATTAAAGCTTATACTTTAAGAAGGTTCCCGGGCTTTAGCAAGGGT
GTTTGCCAGTTCAGTGATGTGTCCAGATCGCGCTCAATATTGGATACGGTTGTATGTCTA
TTACCTGCTGAAAAAGGTAGTGTCTCTTGTAGTTTCTTGTTGAAATTGCTAAAAGCATCC
ATTTCTGTAGATTCTGGAGAAAAGGTAAAGGCAGAGCTAGTAAAAAGAATAGGGCAGCAA
CTGGAGGAGGCTTCTGTCAATGGTCTTTTGATTCGAGCTACAGACGGGGAAGCAACAATG
TATGATGTCCATGTCTTCCACAAGATACTAGAGAACTTTGTTGTGCATAATAAGGATTTG
AAAACTCAGTTTGAAGATGGTAATGAAATTCCAGGGGTTTTATCAGAAGCTTCAAAGCTC
ATGGTGGCGAAGCTAGTAGATGGATACCTTACAGAAATTGCCAAGGATCCTAATCTTCCT
TTGTCGACATTTGTTGGTCTAGCAGAGATGGTAACAGATTTCCCTCGCCCTAGTCATGAC
AGCCTTTATCGGGCAATTGATATATACCTCAAGGAGCACCCTGGGATCAGCAAGAATGAC
AGAAAGAGAATTTGCTGTCTGATGGATTGCAAGAAGCTCTCAGTTGATGCATGTACACAT
GCCGTGCAAAACGAGAGACTTCCATCACGTGTTGTCGTACAAGTTCTCTTCTTTGAGCAA
GTCAGGGCCAATGCATCATCGGGGAGCAGCACTCCGGATCTTCCCAAAGCTATTAGAAAC
CTCACTAGTGCTTCATATGCGAGCTCAAGGTCAGCGACAACAAATACAGAGAATTCGGAG
GTTACAGCCTCTGCAGAAGAACTGAGGGCTTTGAAAGAAGAGCTGGCAGCCTTAAGATTG
GCAAATGGAGGACTAAATGGCGATACCAAACGTCACGTTGACAAGGCTGCCAATGGTAGA
ATGAAAAGTATACTTTCATCAAAGAAGATCTTTACAAAAATTTGGTCAAGCAAAGGCAGG
AAACAAGGGGAAAATAGTGGCTCAGATTCATCTGACAGCTTGGAAGAAGCTAAGTACACA
CCTTCAAGAAAAGGAAGATATTCAGTTTCTTGA