Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013830
CDS Infomation

pacid=37440927 polypeptide=PGSC0003DMP400009572 locus=PGSC0003DMG400005409 ID=PGSC0003DMT400013830.v4.03 annot-version=v4.03
Sequence

ATGGAGGGCTTTATCAACATTCTCTCATTATCCCTTCTCTTAATTTTGAGCCTAGCACAA
GGGGGACTAACCAACCCCAATTGTGCCAAGTTTCACCAAGATAACAAAGACTCATCAACA
CTACAAGTCATTTATGTAGACAGCCCTTGTTCTCCTCTTAAACAACAAAATGCACACTCA
TTATCATGGGTGGATAGTGTTCTCCAAATGCAAAATAAGGACACAAATAGGCTACAATTC
TTGGCTAGCCTTGTTGCTGGTAGATCTTTTGTCCCTATAGCTTCTGGTAGACAAATTCTA
CAAACACCAACTTATATTGTGAAGGCTAAAATTGGGACACCACCTCAAACTTTGTTGGTG
GCTTTGGATAATAGTAATGATTTTTCTTGGTTCCCTTGTGGTGGATGTGTTGGTTGCTCT
TCTAATGTTCTTTCCTATGACAAGTCTACCACTTTCAGCAATGTTAGCTGTGAACGTGCC
TCATGTAGCCTGGTACCAAGACGGGACTGCGATGCGGCCACTTGCACCTTTAACCTAACC
TACGGCGGTTCGAGCGTAGGTGGAACCCTCTCATCAGAAACATTGACACTCGCCACCGAT
CCGATACCCGAATTCCTCTTTGGTTGTGTAAAAAAGATCTCCGGCAGCAACACACCATCT
CAGGGTCTATTAGCTTTGGGCCGTGGCCTATTATCATTTATATCCCAATCCGAAAGCCTC
TACAAGTCCACATTTTCCTATTGTTTGCCCAGTTACAAATCTCCCAACTTTTCTGGCACA
CTTAGATTAGGCCCAAATGGCCAGCCCCAAAGAATTAAAACCACTCCATTGCTAAGAAAC
CCAAGGAGATCATCCTTTTACTATGTCAATTTGGTCGGAGTTAAAGTCGGAAAACGAATC
GTCGATATCCCTGCCGGTGCATTCTCTTTCAACTCTAACACCGGCGCCGGCACAATAATC
GATTCCGGCACTGTGTTTACCAGACTAGTTGAGCCAGCTTACACGGCGGTGAGGAATGAG
TTCAGGAGGAGAATGGGGAGGAACACGACGGTGACGTCACTTGGCGGATTCGACACCTGC
TACACCGTCCCCATAACAATTCCAACAATAACATTGATGTTCGCCGGAATGAACGTGACG
CTGCCGCAAGACAACTTCCTGATTAAAAGCAGCTCAAGCAGCACCACTTGCTTAGCAATG
GCTGCTTCCCCTGCCGATCCAGTGAACTCTGTACTCAACGTAATCGCTAGCTGGCAGCAA
CAGAATCATCGGATTCTGTTTGACGTACCAAATTCTAGGGTTGGAGTTGCTCGTGAAACC
TGTAGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400009572
PEP Infomation

pacid=37440927 transcript=PGSC0003DMT400013830 locus=PGSC0003DMG400005409 ID=PGSC0003DMT400013830.v4.03 annot-version=v4.03
Sequence

MEGFINILSLSLLLILSLAQGGLTNPNCAKFHQDNKDSSTLQVIYVDSPCSPLKQQNAHS
LSWVDSVLQMQNKDTNRLQFLASLVAGRSFVPIASGRQILQTPTYIVKAKIGTPPQTLLV
ALDNSNDFSWFPCGGCVGCSSNVLSYDKSTTFSNVSCERASCSLVPRRDCDAATCTFNLT
YGGSSVGGTLSSETLTLATDPIPEFLFGCVKKISGSNTPSQGLLALGRGLLSFISQSESL
YKSTFSYCLPSYKSPNFSGTLRLGPNGQPQRIKTTPLLRNPRRSSFYYVNLVGVKVGKRI
VDIPAGAFSFNSNTGAGTIIDSGTVFTRLVEPAYTAVRNEFRRRMGRNTTVTSLGGFDTC
YTVPITIPTITLMFAGMNVTLPQDNFLIKSSSSSTTCLAMAASPADPVNSVLNVIASWQQ
QNHRILFDVPNSRVGVARETCS*

Transcript Sequence

Transcript ID

PGSC0003DMT400013830
Transcript Infomation

pacid=37440927 locus=PGSC0003DMG400005409 ID=PGSC0003DMT400013830.v4.03 annot-version=v4.03
Sequence

ATGGAGGGCTTTATCAACATTCTCTCATTATCCCTTCTCTTAATTTTGAGCCTAGCACAA
GGGGGACTAACCAACCCCAATTGTGCCAAGTTTCACCAAGATAACAAAGACTCATCAACA
CTACAAGTCATTTATGTAGACAGCCCTTGTTCTCCTCTTAAACAACAAAATGCACACTCA
TTATCATGGGTGGATAGTGTTCTCCAAATGCAAAATAAGGACACAAATAGGCTACAATTC
TTGGCTAGCCTTGTTGCTGGTAGATCTTTTGTCCCTATAGCTTCTGGTAGACAAATTCTA
CAAACACCAACTTATATTGTGAAGGCTAAAATTGGGACACCACCTCAAACTTTGTTGGTG
GCTTTGGATAATAGTAATGATTTTTCTTGGTTCCCTTGTGGTGGATGTGTTGGTTGCTCT
TCTAATGTTCTTTCCTATGACAAGTCTACCACTTTCAGCAATGTTAGCTGTGAACGTGCC
TCATGTAGCCTGGTACCAAGACGGGACTGCGATGCGGCCACTTGCACCTTTAACCTAACC
TACGGCGGTTCGAGCGTAGGTGGAACCCTCTCATCAGAAACATTGACACTCGCCACCGAT
CCGATACCCGAATTCCTCTTTGGTTGTGTAAAAAAGATCTCCGGCAGCAACACACCATCT
CAGGGTCTATTAGCTTTGGGCCGTGGCCTATTATCATTTATATCCCAATCCGAAAGCCTC
TACAAGTCCACATTTTCCTATTGTTTGCCCAGTTACAAATCTCCCAACTTTTCTGGCACA
CTTAGATTAGGCCCAAATGGCCAGCCCCAAAGAATTAAAACCACTCCATTGCTAAGAAAC
CCAAGGAGATCATCCTTTTACTATGTCAATTTGGTCGGAGTTAAAGTCGGAAAACGAATC
GTCGATATCCCTGCCGGTGCATTCTCTTTCAACTCTAACACCGGCGCCGGCACAATAATC
GATTCCGGCACTGTGTTTACCAGACTAGTTGAGCCAGCTTACACGGCGGTGAGGAATGAG
TTCAGGAGGAGAATGGGGAGGAACACGACGGTGACGTCACTTGGCGGATTCGACACCTGC
TACACCGTCCCCATAACAATTCCAACAATAACATTGATGTTCGCCGGAATGAACGTGACG
CTGCCGCAAGACAACTTCCTGATTAAAAGCAGCTCAAGCAGCACCACTTGCTTAGCAATG
GCTGCTTCCCCTGCCGATCCAGTGAACTCTGTACTCAACGTAATCGCTAGCTGGCAGCAA
CAGAATCATCGGATTCTGTTTGACGTACCAAATTCTAGGGTTGGAGTTGCTCGTGAAACC
TGTAGCTGA