Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013769
CDS Infomation

pacid=37448806 polypeptide=PGSC0003DMP400009535 locus=PGSC0003DMG400005390 ID=PGSC0003DMT400013769.v4.03 annot-version=v4.03
Sequence

ATGGCAACCAAAAGATTCTTTGATGACTTTGTTGATCCTGACTCCAATCAACCAAATTAC
AAACGTCTAAGAAAAACACCTTCTTTTGCTTCTGTGATTAAAGAAGTGGTGATGGTGAAT
TTCTTAGATAACTTTTGTTCAGCCTTGGAACCCATGCTCCGAAAAGTGGTGCATGAAGAG
GTTGAAAGTGGACTAAGAAGATGTTCTAGATCAATAGGAAGATCACCTTCATTAAGAATC
AAAGCACTTGAACCATCAAACCTACGTTTAATATTCAACAAAAAACTTTCTCTACCAATT
TTCACCAATAGCAAAATGATGGATTCAGATGGTCAATACCCTCTCCAGCTCCTACTTGTA
GACGCGACTGGTGATTGCCTAGTTCCAACCACCTTAGCTAGCCCGATTAAAATCGAGATC
GTGGTGCTAGATGGAGACTTTCCTAGTGGAGAAAATTGGACACATGAAGAGTTCAATAAG
AATATTGTTAAAGAAAGGGCGGGAAAAAGACCATTGGTTACTGGTGAACTTAATATTACT
ATGAGAGATGGTGTTGCTTCTCTTGGTGATCTTGAATTTACTGATAATTCTAGTTGGATT
CGAAGCCGGAGATTTCGTATCGGTGCAAAAGTGGTTCACATAGGAAATGGTCAAAATTCG
ATACGAATAATGGAAGCCATGACTGATTCTTTTATGGTTAAAGATCATCGCGGAGAATTG
TATAAGAAGCATTATCCACCAGCATTAGGAGATGATGTGTGGCGTCTTGAAAAAATTGGA
AAAGATGGAACTTTTCACAAGAAGCTAACTTCACATGGCATAAAGACAGTACAAGATTTT
CTCAAGTTGGCCAATATTGACCCACATAAAATAAGAAGGATACTTGGAAATGGAATGTCG
GAGAAAATGTGGGAAGTAACATATAGACATGCAAAAACTTGTGAGATGGGAGCTAAATCA
TACATAGCTAGAGGACCAAACTACATTCTTATCCTCAATCCAATATGTCAAGTTATTAGA
GCAATTATTAATGGACAAATTTGTCATAGTAGAGAGTTAAGAGGAATTCAAAGGTCCTAT
ATTGAGAATTTGGTGAGGAATGCCTTCACAAATTGGAGTTCTTTAGAAGAAGTTGATGGT
GGCCTGCAAGTCAATGAACCTGCAGCTTTACTCACTCAAGGAGAACGAGGGGTGCATCAT
CAAAATGCCTATCCTAGGAGTGCACTTTTGACTGCAGCAGCTGGATCAATTGAGTGTGGT
GATTGGATTGTTAACCAAGCACACATATGCTTACCTATTGAATCTTCTTCTGAAGAGGAA
TTACATTATTTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400009535
PEP Infomation

pacid=37448806 transcript=PGSC0003DMT400013769 locus=PGSC0003DMG400005390 ID=PGSC0003DMT400013769.v4.03 annot-version=v4.03
Sequence

MATKRFFDDFVDPDSNQPNYKRLRKTPSFASVIKEVVMVNFLDNFCSALEPMLRKVVHEE
VESGLRRCSRSIGRSPSLRIKALEPSNLRLIFNKKLSLPIFTNSKMMDSDGQYPLQLLLV
DATGDCLVPTTLASPIKIEIVVLDGDFPSGENWTHEEFNKNIVKERAGKRPLVTGELNIT
MRDGVASLGDLEFTDNSSWIRSRRFRIGAKVVHIGNGQNSIRIMEAMTDSFMVKDHRGEL
YKKHYPPALGDDVWRLEKIGKDGTFHKKLTSHGIKTVQDFLKLANIDPHKIRRILGNGMS
EKMWEVTYRHAKTCEMGAKSYIARGPNYILILNPICQVIRAIINGQICHSRELRGIQRSY
IENLVRNAFTNWSSLEEVDGGLQVNEPAALLTQGERGVHHQNAYPRSALLTAAAGSIECG
DWIVNQAHICLPIESSSEEELHYL*

Transcript Sequence

Transcript ID

PGSC0003DMT400013769
Transcript Infomation

pacid=37448806 locus=PGSC0003DMG400005390 ID=PGSC0003DMT400013769.v4.03 annot-version=v4.03
Sequence

ATGGCAACCAAAAGATTCTTTGATGACTTTGTTGATCCTGACTCCAATCAACCAAATTAC
AAACGTCTAAGAAAAACACCTTCTTTTGCTTCTGTGATTAAAGAAGTGGTGATGGTGAAT
TTCTTAGATAACTTTTGTTCAGCCTTGGAACCCATGCTCCGAAAAGTGGTGCATGAAGAG
GTTGAAAGTGGACTAAGAAGATGTTCTAGATCAATAGGAAGATCACCTTCATTAAGAATC
AAAGCACTTGAACCATCAAACCTACGTTTAATATTCAACAAAAAACTTTCTCTACCAATT
TTCACCAATAGCAAAATGATGGATTCAGATGGTCAATACCCTCTCCAGCTCCTACTTGTA
GACGCGACTGGTGATTGCCTAGTTCCAACCACCTTAGCTAGCCCGATTAAAATCGAGATC
GTGGTGCTAGATGGAGACTTTCCTAGTGGAGAAAATTGGACACATGAAGAGTTCAATAAG
AATATTGTTAAAGAAAGGGCGGGAAAAAGACCATTGGTTACTGGTGAACTTAATATTACT
ATGAGAGATGGTGTTGCTTCTCTTGGTGATCTTGAATTTACTGATAATTCTAGTTGGATT
CGAAGCCGGAGATTTCGTATCGGTGCAAAAGTGGTTCACATAGGAAATGGTCAAAATTCG
ATACGAATAATGGAAGCCATGACTGATTCTTTTATGGTTAAAGATCATCGCGGAGAATTG
TATAAGAAGCATTATCCACCAGCATTAGGAGATGATGTGTGGCGTCTTGAAAAAATTGGA
AAAGATGGAACTTTTCACAAGAAGCTAACTTCACATGGCATAAAGACAGTACAAGATTTT
CTCAAGTTGGCCAATATTGACCCACATAAAATAAGAAGGATACTTGGAAATGGAATGTCG
GAGAAAATGTGGGAAGTAACATATAGACATGCAAAAACTTGTGAGATGGGAGCTAAATCA
TACATAGCTAGAGGACCAAACTACATTCTTATCCTCAATCCAATATGTCAAGTTATTAGA
GCAATTATTAATGGACAAATTTGTCATAGTAGAGAGTTAAGAGGAATTCAAAGGTCCTAT
ATTGAGAATTTGGTGAGGAATGCCTTCACAAATTGGAGTTCTTTAGAAGAAGTTGATGGT
GGCCTGCAAGTCAATGAACCTGCAGCTTTACTCACTCAAGGAGAACGAGGGGTGCATCAT
CAAAATGCCTATCCTAGGAGTGCACTTTTGACTGCAGCAGCTGGATCAATTGAGTGTGGT
GATTGGATTGTTAACCAAGCACACATATGCTTACCTATTGAATCTTCTTCTGAAGAGGAA
TTACATTATTTATGA