Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013766
CDS Infomation

pacid=37446507 polypeptide=PGSC0003DMP400009532 locus=PGSC0003DMG400005388 ID=PGSC0003DMT400013766.v4.03 annot-version=v4.03
Sequence

ATGGCTTTTCATTATTTCAATCCAGATATGCAAATCATTATTCCACAATTCTCTCTATTA
AACACTGACACAAATTTGAATTTTCATAACCAATTTCCAGAACAAAATTACTTGAATACC
ACTTCCCTGGAAATGTCTAATTTCAATTTTCATAAACATTCTGATGAACATATTTTCAAC
CAAATCCCTGAATTTCCGATAGGTTTAATAGAAAATTTCCAACAAGATATGTTCAATCTT
TCAGTACCAGCTAGAAATGATATAAATGAAAGCAAGAAAAGGAAAACAATTGAAACCCCA
GAAAGTAGCTCTGCTTACTCATCCCCTGCAGTTTCTTCAAGAAGAAAAACAAGCAAAGGA
AGAGGAAAGAGAGTAAAAAGTGATGATAATGAAGAAGAGAAACTAAGGCAAGTGGTGCAT
GTAAGAGCTAAGAGAGGCCAAGCAACTGATAGTCACAGTTTAGCAGAAAGGGTTAGAAGA
GGAAAAATTAATGAAAGACTTGGGTGTTTACAAGACATTGTTCCAGGATGCTACAAGTCT
ATGGGCATGGCAGTAATGCTGGATGAAATAATTAACTATGTGCAATCTTTGCAAAATCAA
GTTGAGTTCCTCTCAATGAAGCTATCTGCAGCTAGCACATATTATGACTTCAACTCAGAG
ACAGACATTTTGGAGACAATGCAGAGAGCAAAGGCATATGAAACACACATGATGCAGAAG
CTAAAGAAAGAAGGATGTGAAGGGGTGGGTTCTAATCAAGTTGCCCCTCTAATTGACCAC
ACTTTTGGCTGTTATCCCAAGTTGTCTTACAACACCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400009532
PEP Infomation

pacid=37446507 transcript=PGSC0003DMT400013766 locus=PGSC0003DMG400005388 ID=PGSC0003DMT400013766.v4.03 annot-version=v4.03
Sequence

MAFHYFNPDMQIIIPQFSLLNTDTNLNFHNQFPEQNYLNTTSLEMSNFNFHKHSDEHIFN
QIPEFPIGLIENFQQDMFNLSVPARNDINESKKRKTIETPESSSAYSSPAVSSRRKTSKG
RGKRVKSDDNEEEKLRQVVHVRAKRGQATDSHSLAERVRRGKINERLGCLQDIVPGCYKS
MGMAVMLDEIINYVQSLQNQVEFLSMKLSAASTYYDFNSETDILETMQRAKAYETHMMQK
LKKEGCEGVGSNQVAPLIDHTFGCYPKLSYNT*

Transcript Sequence

Transcript ID

PGSC0003DMT400013766
Transcript Infomation

pacid=37446507 locus=PGSC0003DMG400005388 ID=PGSC0003DMT400013766.v4.03 annot-version=v4.03
Sequence

ATGGCTTTTCATTATTTCAATCCAGATATGCAAATCATTATTCCACAATTCTCTCTATTA
AACACTGACACAAATTTGAATTTTCATAACCAATTTCCAGAACAAAATTACTTGAATACC
ACTTCCCTGGAAATGTCTAATTTCAATTTTCATAAACATTCTGATGAACATATTTTCAAC
CAAATCCCTGAATTTCCGATAGGTTTAATAGAAAATTTCCAACAAGATATGTTCAATCTT
TCAGTACCAGCTAGAAATGATATAAATGAAAGCAAGAAAAGGAAAACAATTGAAACCCCA
GAAAGTAGCTCTGCTTACTCATCCCCTGCAGTTTCTTCAAGAAGAAAAACAAGCAAAGGA
AGAGGAAAGAGAGTAAAAAGTGATGATAATGAAGAAGAGAAACTAAGGCAAGTGGTGCAT
GTAAGAGCTAAGAGAGGCCAAGCAACTGATAGTCACAGTTTAGCAGAAAGGGTTAGAAGA
GGAAAAATTAATGAAAGACTTGGGTGTTTACAAGACATTGTTCCAGGATGCTACAAGTCT
ATGGGCATGGCAGTAATGCTGGATGAAATAATTAACTATGTGCAATCTTTGCAAAATCAA
GTTGAGTTCCTCTCAATGAAGCTATCTGCAGCTAGCACATATTATGACTTCAACTCAGAG
ACAGACATTTTGGAGACAATGCAGAGAGCAAAGGCATATGAAACACACATGATGCAGAAG
CTAAAGAAAGAAGGATGTGAAGGGGTGGGTTCTAATCAAGTTGCCCCTCTAATTGACCAC
ACTTTTGGCTGTTATCCCAAGTTGTCTTACAACACCTAA