Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013750
CDS Infomation

pacid=37471154 polypeptide=PGSC0003DMP400009519 locus=PGSC0003DMG400005381 ID=PGSC0003DMT400013750.v4.03 annot-version=v4.03
Sequence

ATGGCAGATATTTCGCATCTTGAAAGAATGGGAAGAGAGCTCAAATGCCCCATCTGCTTG
AGTCTGTTGAATTCTGCTGTTTCACTTACATGTAATCATGTATTTTGCAATTTATGTATT
CAGACTGGTATGAAATCTGGGTCCAATTGTCCGGTGTGCAAAGTTCCATTTCATCGCAGA
GAAATCCGACCTGCTCTCCACATGGATAACTTGGTGAGCATCTATAAGAACATGGAAATC
GCTTCAGGAGTCAATATGTTTCTCACTCAATCCAATCCTTCATCAAAATTGCCAGGGGAA
GACACTCAATCTAATGGCGAAAAAAATTGTGGATTCCAAGAGACATCTAAAACTGTAACA
GAAGCTCCAGCGACAGGCAATCAGAAAAGAAAAAGAGGGAAAGGTTCAAAAAAATCTTCA
GGGTGCAACAAAAAAATTTCCGGATCAAATCTTATTAGACCTTCTTTTCCGACAAAGAAG
AGAGTGCAGGTGCCACAATATCCACCTTCAGAGACTCCACCACCTACAAAGTTAGTTGGT
GGAAATGGTAAATCCATCACCGATGAAGTTCAGAAACCATTGGTAATTGAGAGAGACAGG
TCTATGCTATATGAAAAAGGAGAACCTGTACTATCTCCATTCTTCTGGCTGAGAGAAGAG
AATATAGAAAGATCAAGTCAGCAAACAGATGGGGACATTATCATGGATACACCTCCAGCC
GTTCCATCCTTCAGCGATATGAAGGACTTGGATGATGAGGTTCACTGCGAAATGTCTCCA
AAAAGTGGACCCTATGATGCAGCAAGTGGAGCAGATCTTTTTAACAGTGAGATGTTTGAC
TGGACACAAAGAGCTTGCTCCCCTGAACTTTGTTCTAGCCCCTTTAAGATGAAGCTTAAG
GATACTATTGATTCTGCTGGAGCTCAGGAAAAGACTCAAGCTCGCTCAGTTGAGGAAAGT
GGTATTAATGCATCAGCAACTGAAAACAGAACAGCTGTGGAAAATGAAAAGGGTACTGAT
AAAGGACAGCTGAGTTCACCCGCTTTATTTCCTCCTGAAAATAAAACCACTAGTAGAAAA
GACGTTGTTTGCAAGTCTAGCAGGAGTAAGGCATTGAGAATTAGCCAGAAGAAACAAGGA
AAAAGCATAATTGGAGAAGTATCAGAAGTTCATAATGCTTCACCAAAAGCAGCTGAAAAA
ACTATGAAGAACAATCAGGATAATGCCAATGCATTTATCTCGAATAAGAAGGATTTGAAA
AACAAGAAAAAGGGTAGATCCTCTAGAAATGTCACTGGGTCAGTAGTAGAAGACATTTCC
ACTTTATGTGGTGCTAAAAGACTTCGCAAGGGCAATAACTCGAAGTCCTTCAACTTGTCT
ACTCTTGTGAATCAGGAAAAACACAGTGAAGGAAGTGTTGAGACACTTGACTTGAAGACA
CATAATAAACTCCGCAAGGGATCATTAAGTGAACAAAATAAAAACTGTTTTGGACCAAAA
GGCGGACAAAAAACTGCTGCATGTAACATTCCACAAACTCAAGATGAAGCTTTGCCTTTC
GAATCAGCAAATAGATTGATTCCCATGGATAACAGGAAACCTACTCCTAGTACAAAACTG
AAGAAATGTGAGCTCGGTAGTGGCAACAAGCTTCATGGGAAGAAAAAAGTGAAGTTTTCT
GACAATGGGCAGCTTGCTGACAAGGATAATATTACGCTTCAAAAGATTCAGAAGAGAGTG
CACAATTCATTGGAAACAGAGAAATCTGTTTTGAACTTGAATGATTCAGTTTTGCAGAAG
TGTGAGGCAAGCCAAAACCAAATACAGTGTGCTTTCTGCCGTTCAGCAGAGGAATCTGAG
GTTTCAGGAGTCATGGTAAGCTACCTTAATGGAAACCCTGTCAAAGAAGATGTCAATGGA
GCACCGGGTGTTATACATGTTCACAAATATTGTGCAGAGTGGGCCCCTAATGTATATTTT
GGAGACGATGATGTGGTCAACCTTGAATCTGAACTGAAGAGGAGTCGAAGGATCACTTGT
TTTTTCTGTGGAGTAAAGGGGGCAGCTCTTGGGTGTTATGAGACGAGTTGTCGCAAAAGC
TTTCATGTTCCTTGTGCCAAATTGACACCAGAGTGTAGATGGGATTCTGACAACTTTGTT
ATGTTATGCCCTTTGCATGCTAACTCTAAGTTGCCATGCGAGATCCCAGGAAAACAGACA
AAGATTGGAGATAGTATTAAAAGAAATTCTCGTATCCACCAACCCAAAGTCTCAGCAACA
CCTGATAATGCTGCTACTTTGCAGTGGAAGTCTCAGAAGAAGAATAAGAACTTAGTGCTC
TGTTGTTCAGCTCTAACCGCTGATGAAAAAGAGCTTGTTTCTACATTAAAGAGGTTGTCT
GGAGTGACAGTAGTCAAGAACTGGGACCTAAGTGTCACCCATGTCATTGCTTCTACAGAT
GAGAAAGGAGCATGCCGAAGAACTCTCAAATATTTGATGGGTGTCTTGGCTGGGAAATGG
ATAATGAGCATCGACTGGATTATTGCTAGCTTGGAAGCCACAGAATTTATTGATGAGCAA
CAATATGAGATTAAAATAGATACTCATGGCATTGTGGATGGGCCTAAGCTTGGAAGATTG
AGGATTTTAAACAAGCAACCAAAGCTTTTCAATGGATACAAGTTCTTTTTTATGGGTGAC
TTTTTACCTTCATACAAGAGCTACCTACATGACCTTGTTATTGCTGCTGGAGGAATTGTC
CTTAACAGGAAGCCTATAGCAGTGGATCAGGAAATTCTTTCACCCGGATGCTCTCCACCG
TTTGTAATTTATAGTCACGAACAACTTGATCAGTGTGAAGGAAGTGAAAAAATTTCAATT
ATAGTGCGCAGAAGATCTGATGCAGAAGTTTTGGCTAGTTCAACTGGAGCTGTAGCTGCC
AGCAACTCATGGATTCTAAACTGCATTGCTGGCTCTAGGTTGTTGGAGCTAGAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400009519
PEP Infomation

pacid=37471154 transcript=PGSC0003DMT400013750 locus=PGSC0003DMG400005381 ID=PGSC0003DMT400013750.v4.03 annot-version=v4.03
Sequence

MADISHLERMGRELKCPICLSLLNSAVSLTCNHVFCNLCIQTGMKSGSNCPVCKVPFHRR
EIRPALHMDNLVSIYKNMEIASGVNMFLTQSNPSSKLPGEDTQSNGEKNCGFQETSKTVT
EAPATGNQKRKRGKGSKKSSGCNKKISGSNLIRPSFPTKKRVQVPQYPPSETPPPTKLVG
GNGKSITDEVQKPLVIERDRSMLYEKGEPVLSPFFWLREENIERSSQQTDGDIIMDTPPA
VPSFSDMKDLDDEVHCEMSPKSGPYDAASGADLFNSEMFDWTQRACSPELCSSPFKMKLK
DTIDSAGAQEKTQARSVEESGINASATENRTAVENEKGTDKGQLSSPALFPPENKTTSRK
DVVCKSSRSKALRISQKKQGKSIIGEVSEVHNASPKAAEKTMKNNQDNANAFISNKKDLK
NKKKGRSSRNVTGSVVEDISTLCGAKRLRKGNNSKSFNLSTLVNQEKHSEGSVETLDLKT
HNKLRKGSLSEQNKNCFGPKGGQKTAACNIPQTQDEALPFESANRLIPMDNRKPTPSTKL
KKCELGSGNKLHGKKKVKFSDNGQLADKDNITLQKIQKRVHNSLETEKSVLNLNDSVLQK
CEASQNQIQCAFCRSAEESEVSGVMVSYLNGNPVKEDVNGAPGVIHVHKYCAEWAPNVYF
GDDDVVNLESELKRSRRITCFFCGVKGAALGCYETSCRKSFHVPCAKLTPECRWDSDNFV
MLCPLHANSKLPCEIPGKQTKIGDSIKRNSRIHQPKVSATPDNAATLQWKSQKKNKNLVL
CCSALTADEKELVSTLKRLSGVTVVKNWDLSVTHVIASTDEKGACRRTLKYLMGVLAGKW
IMSIDWIIASLEATEFIDEQQYEIKIDTHGIVDGPKLGRLRILNKQPKLFNGYKFFFMGD
FLPSYKSYLHDLVIAAGGIVLNRKPIAVDQEILSPGCSPPFVIYSHEQLDQCEGSEKISI
IVRRRSDAEVLASSTGAVAASNSWILNCIAGSRLLELE*

Transcript Sequence

Transcript ID

PGSC0003DMT400013750
Transcript Infomation

pacid=37471154 locus=PGSC0003DMG400005381 ID=PGSC0003DMT400013750.v4.03 annot-version=v4.03
Sequence

ATGGCAGATATTTCGCATCTTGAAAGAATGGGAAGAGAGCTCAAATGCCCCATCTGCTTG
AGTCTGTTGAATTCTGCTGTTTCACTTACATGTAATCATGTATTTTGCAATTTATGTATT
CAGACTGGTATGAAATCTGGGTCCAATTGTCCGGTGTGCAAAGTTCCATTTCATCGCAGA
GAAATCCGACCTGCTCTCCACATGGATAACTTGGTGAGCATCTATAAGAACATGGAAATC
GCTTCAGGAGTCAATATGTTTCTCACTCAATCCAATCCTTCATCAAAATTGCCAGGGGAA
GACACTCAATCTAATGGCGAAAAAAATTGTGGATTCCAAGAGACATCTAAAACTGTAACA
GAAGCTCCAGCGACAGGCAATCAGAAAAGAAAAAGAGGGAAAGGTTCAAAAAAATCTTCA
GGGTGCAACAAAAAAATTTCCGGATCAAATCTTATTAGACCTTCTTTTCCGACAAAGAAG
AGAGTGCAGGTGCCACAATATCCACCTTCAGAGACTCCACCACCTACAAAGTTAGTTGGT
GGAAATGGTAAATCCATCACCGATGAAGTTCAGAAACCATTGGTAATTGAGAGAGACAGG
TCTATGCTATATGAAAAAGGAGAACCTGTACTATCTCCATTCTTCTGGCTGAGAGAAGAG
AATATAGAAAGATCAAGTCAGCAAACAGATGGGGACATTATCATGGATACACCTCCAGCC
GTTCCATCCTTCAGCGATATGAAGGACTTGGATGATGAGGTTCACTGCGAAATGTCTCCA
AAAAGTGGACCCTATGATGCAGCAAGTGGAGCAGATCTTTTTAACAGTGAGATGTTTGAC
TGGACACAAAGAGCTTGCTCCCCTGAACTTTGTTCTAGCCCCTTTAAGATGAAGCTTAAG
GATACTATTGATTCTGCTGGAGCTCAGGAAAAGACTCAAGCTCGCTCAGTTGAGGAAAGT
GGTATTAATGCATCAGCAACTGAAAACAGAACAGCTGTGGAAAATGAAAAGGGTACTGAT
AAAGGACAGCTGAGTTCACCCGCTTTATTTCCTCCTGAAAATAAAACCACTAGTAGAAAA
GACGTTGTTTGCAAGTCTAGCAGGAGTAAGGCATTGAGAATTAGCCAGAAGAAACAAGGA
AAAAGCATAATTGGAGAAGTATCAGAAGTTCATAATGCTTCACCAAAAGCAGCTGAAAAA
ACTATGAAGAACAATCAGGATAATGCCAATGCATTTATCTCGAATAAGAAGGATTTGAAA
AACAAGAAAAAGGGTAGATCCTCTAGAAATGTCACTGGGTCAGTAGTAGAAGACATTTCC
ACTTTATGTGGTGCTAAAAGACTTCGCAAGGGCAATAACTCGAAGTCCTTCAACTTGTCT
ACTCTTGTGAATCAGGAAAAACACAGTGAAGGAAGTGTTGAGACACTTGACTTGAAGACA
CATAATAAACTCCGCAAGGGATCATTAAGTGAACAAAATAAAAACTGTTTTGGACCAAAA
GGCGGACAAAAAACTGCTGCATGTAACATTCCACAAACTCAAGATGAAGCTTTGCCTTTC
GAATCAGCAAATAGATTGATTCCCATGGATAACAGGAAACCTACTCCTAGTACAAAACTG
AAGAAATGTGAGCTCGGTAGTGGCAACAAGCTTCATGGGAAGAAAAAAGTGAAGTTTTCT
GACAATGGGCAGCTTGCTGACAAGGATAATATTACGCTTCAAAAGATTCAGAAGAGAGTG
CACAATTCATTGGAAACAGAGAAATCTGTTTTGAACTTGAATGATTCAGTTTTGCAGAAG
TGTGAGGCAAGCCAAAACCAAATACAGTGTGCTTTCTGCCGTTCAGCAGAGGAATCTGAG
GTTTCAGGAGTCATGGTAAGCTACCTTAATGGAAACCCTGTCAAAGAAGATGTCAATGGA
GCACCGGGTGTTATACATGTTCACAAATATTGTGCAGAGTGGGCCCCTAATGTATATTTT
GGAGACGATGATGTGGTCAACCTTGAATCTGAACTGAAGAGGAGTCGAAGGATCACTTGT
TTTTTCTGTGGAGTAAAGGGGGCAGCTCTTGGGTGTTATGAGACGAGTTGTCGCAAAAGC
TTTCATGTTCCTTGTGCCAAATTGACACCAGAGTGTAGATGGGATTCTGACAACTTTGTT
ATGTTATGCCCTTTGCATGCTAACTCTAAGTTGCCATGCGAGATCCCAGGAAAACAGACA
AAGATTGGAGATAGTATTAAAAGAAATTCTCGTATCCACCAACCCAAAGTCTCAGCAACA
CCTGATAATGCTGCTACTTTGCAGTGGAAGTCTCAGAAGAAGAATAAGAACTTAGTGCTC
TGTTGTTCAGCTCTAACCGCTGATGAAAAAGAGCTTGTTTCTACATTAAAGAGGTTGTCT
GGAGTGACAGTAGTCAAGAACTGGGACCTAAGTGTCACCCATGTCATTGCTTCTACAGAT
GAGAAAGGAGCATGCCGAAGAACTCTCAAATATTTGATGGGTGTCTTGGCTGGGAAATGG
ATAATGAGCATCGACTGGATTATTGCTAGCTTGGAAGCCACAGAATTTATTGATGAGCAA
CAATATGAGATTAAAATAGATACTCATGGCATTGTGGATGGGCCTAAGCTTGGAAGATTG
AGGATTTTAAACAAGCAACCAAAGCTTTTCAATGGATACAAGTTCTTTTTTATGGGTGAC
TTTTTACCTTCATACAAGAGCTACCTACATGACCTTGTTATTGCTGCTGGAGGAATTGTC
CTTAACAGGAAGCCTATAGCAGTGGATCAGGAAATTCTTTCACCCGGATGCTCTCCACCG
TTTGTAATTTATAGTCACGAACAACTTGATCAGTGTGAAGGAAGTGAAAAAATTTCAATT
ATAGTGCGCAGAAGATCTGATGCAGAAGTTTTGGCTAGTTCAACTGGAGCTGTAGCTGCC
AGCAACTCATGGATTCTAAACTGCATTGCTGGCTCTAGGTTGTTGGAGCTAGAATAG