Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013729
CDS Infomation

pacid=37446995 polypeptide=PGSC0003DMP400009507 locus=PGSC0003DMG400005371 ID=PGSC0003DMT400013729.v4.03 annot-version=v4.03
Sequence

ATGGGTAACCCATCATCAAGATTGCATTGTTTGATCAAAAGGTGTCCCAATTTTTATAGA
AAACCCCATTTCTTGCTTGGTTTAGCCAAAGATGAAAAACCCATTTTCAACACTGCATTT
TGCGATCAGATGGTGTCTCCTTTTTCTCAAACAAAGCAATTTTCAGTTGGAGCAAACGAT
ACTTTTATTGATCCGATCCCAGTTGTGGCTACTACTAGGTCACCGCTAGATAGCTCTCCT
ACAATTGATGCAGGTTCTTCAATTAGAAAGCCGATCAGTTTGTGGCCAGGTATGTACCAT
TCGCCTGTGACAAATGCTTTGTGGGAAGCAAGATCAAGTATTTTTGAGAGGTTTTCAGAT
GCTCCAGTTGATCCTACTGCACAAAATGATTTGATTACTAAAACCCCATCTAAGAGTAGG
ACTAGTGTTCTTTACAAATTCTCTTCTGATTATGTGCTGAGAGAGCAGTATAGGAACCCC
TGGAATGAGATTAGGATGGGGAAGTTGCTGGAAGACCTTGATGCTTTGGCAGGAACTATA
TCCTTCAAGCATTGTTCCAGTAATGATGGTACTACTAGGCCCTTGATACTAGTTACTGCT
TCTGTGGACAAGATGCTTTTGAAGAAACCTATTCGTGTTGATACTGATCTGAAAATAGAG
GGTGCTGTTACATGGGTTGGTCGTTCATCTATGGAGATTCAACTGGAAGTAATGCAATCT
TCACCAGAAGCATCCAGTGCATCGGAGTCATTAGCTCTAACTGCAAACTTCACTTTTGTG
GCCCGAGATTCTAAGACCGGAAAATCAGCTCCAATTAATCAGATATCTCCCGAAACTGAA
ACAGAAAAACTTCTCTGGGAAGAAGCTGAAGAAAGAAACAAAATGAGAAAGGTTAAAAGG
GGAGAACGGAAGAAGGAAATTCAGGGTGAGGAAGTGAATAGGCTAAACGAATTGTTGGCT
GAGAGCCGAATCTTTTGTGATATGCCTGCTTTAGCAGATAAAGACAGCATTTTAATAAAA
GATACATGTCTTCAGAACTCTTTGATTTGCCAGCCACAGCAGCGAAATATCCATGGTCGA
ATCTTTGGAGGATTCTTGATGCGGAGAGCTTTTGAGCTGGCTTATGCAACAGCTTATGCA
TTTGCAGGCAGTGCACCTTGCTTTGTGGAAGTTGATCATGTTGACTTCTTGAAACCTGTT
GATGTTGGAAATTTCCTCCGCCTCAAATCATGTGTTTTGTACACAGAACTAGAGAGTTTA
TCTAAGCCTCTGATCAATGTAGAAGTGGTAGCTCATGTCATGCGCCCTGAGTTGCGGTCT
AGTGAGGTTTCAAACAATTTCTATTTCACTTTCACTGTCCATCAAGATTCACTGAAAAAT
GGTGCACGGGTTAGGAATGTCGTCCCTGGTACAGAGGAAGAAGCACGTCGTGTGATTGAA
CGGATGGATGCTGAAAATTCATGTTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400009507
PEP Infomation

pacid=37446995 transcript=PGSC0003DMT400013729 locus=PGSC0003DMG400005371 ID=PGSC0003DMT400013729.v4.03 annot-version=v4.03
Sequence

MGNPSSRLHCLIKRCPNFYRKPHFLLGLAKDEKPIFNTAFCDQMVSPFSQTKQFSVGAND
TFIDPIPVVATTRSPLDSSPTIDAGSSIRKPISLWPGMYHSPVTNALWEARSSIFERFSD
APVDPTAQNDLITKTPSKSRTSVLYKFSSDYVLREQYRNPWNEIRMGKLLEDLDALAGTI
SFKHCSSNDGTTRPLILVTASVDKMLLKKPIRVDTDLKIEGAVTWVGRSSMEIQLEVMQS
SPEASSASESLALTANFTFVARDSKTGKSAPINQISPETETEKLLWEEAEERNKMRKVKR
GERKKEIQGEEVNRLNELLAESRIFCDMPALADKDSILIKDTCLQNSLICQPQQRNIHGR
IFGGFLMRRAFELAYATAYAFAGSAPCFVEVDHVDFLKPVDVGNFLRLKSCVLYTELESL
SKPLINVEVVAHVMRPELRSSEVSNNFYFTFTVHQDSLKNGARVRNVVPGTEEEARRVIE
RMDAENSCS*

Transcript Sequence

Transcript ID

PGSC0003DMT400013729
Transcript Infomation

pacid=37446995 locus=PGSC0003DMG400005371 ID=PGSC0003DMT400013729.v4.03 annot-version=v4.03
Sequence

ATGGGTAACCCATCATCAAGATTGCATTGTTTGATCAAAAGGTGTCCCAATTTTTATAGA
AAACCCCATTTCTTGCTTGGTTTAGCCAAAGATGAAAAACCCATTTTCAACACTGCATTT
TGCGATCAGATGGTGTCTCCTTTTTCTCAAACAAAGCAATTTTCAGTTGGAGCAAACGAT
ACTTTTATTGATCCGATCCCAGTTGTGGCTACTACTAGGTCACCGCTAGATAGCTCTCCT
ACAATTGATGCAGGTTCTTCAATTAGAAAGCCGATCAGTTTGTGGCCAGGTATGTACCAT
TCGCCTGTGACAAATGCTTTGTGGGAAGCAAGATCAAGTATTTTTGAGAGGTTTTCAGAT
GCTCCAGTTGATCCTACTGCACAAAATGATTTGATTACTAAAACCCCATCTAAGAGTAGG
ACTAGTGTTCTTTACAAATTCTCTTCTGATTATGTGCTGAGAGAGCAGTATAGGAACCCC
TGGAATGAGATTAGGATGGGGAAGTTGCTGGAAGACCTTGATGCTTTGGCAGGAACTATA
TCCTTCAAGCATTGTTCCAGTAATGATGGTACTACTAGGCCCTTGATACTAGTTACTGCT
TCTGTGGACAAGATGCTTTTGAAGAAACCTATTCGTGTTGATACTGATCTGAAAATAGAG
GGTGCTGTTACATGGGTTGGTCGTTCATCTATGGAGATTCAACTGGAAGTAATGCAATCT
TCACCAGAAGCATCCAGTGCATCGGAGTCATTAGCTCTAACTGCAAACTTCACTTTTGTG
GCCCGAGATTCTAAGACCGGAAAATCAGCTCCAATTAATCAGATATCTCCCGAAACTGAA
ACAGAAAAACTTCTCTGGGAAGAAGCTGAAGAAAGAAACAAAATGAGAAAGGTTAAAAGG
GGAGAACGGAAGAAGGAAATTCAGGGTGAGGAAGTGAATAGGCTAAACGAATTGTTGGCT
GAGAGCCGAATCTTTTGTGATATGCCTGCTTTAGCAGATAAAGACAGCATTTTAATAAAA
GATACATGTCTTCAGAACTCTTTGATTTGCCAGCCACAGCAGCGAAATATCCATGGTCGA
ATCTTTGGAGGATTCTTGATGCGGAGAGCTTTTGAGCTGGCTTATGCAACAGCTTATGCA
TTTGCAGGCAGTGCACCTTGCTTTGTGGAAGTTGATCATGTTGACTTCTTGAAACCTGTT
GATGTTGGAAATTTCCTCCGCCTCAAATCATGTGTTTTGTACACAGAACTAGAGAGTTTA
TCTAAGCCTCTGATCAATGTAGAAGTGGTAGCTCATGTCATGCGCCCTGAGTTGCGGTCT
AGTGAGGTTTCAAACAATTTCTATTTCACTTTCACTGTCCATCAAGATTCACTGAAAAAT
GGTGCACGGGTTAGGAATGTCGTCCCTGGTACAGAGGAAGAAGCACGTCGTGTGATTGAA
CGGATGGATGCTGAAAATTCATGTTCTTGA