Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013718
CDS Infomation

pacid=37447428 polypeptide=PGSC0003DMP400009498 locus=PGSC0003DMG400005366 ID=PGSC0003DMT400013718.v4.03 annot-version=v4.03
Sequence

ATGGCATCGCCTGAAATTGATTATCCCAGGTTATCCTCGGGTTCTGAATCTTTTGGTGGA
TGCTTTAACATACGAATAGAAGGAGAAGACTCGAGACACACTTTGGATTTTCATGAAGAT
CGAAAGTGTCCAGTTTATAATGCACGTAATATCCCAGAGCCTCCACCTCCTCCTGGTAAA
ATCTGTTTGAAATCCATTACTCATGAAAGAGGACATGGTAAGTCTGATCGTGTCCCTAAT
GAAACTCGAGATACATGGGACAAGCTTTTTAAAGATGGATATGGAGCAGATGTACATATA
AGTACTGATAATGGATCATTTATTCTTGCTCATTCTACTCTTTTGAGGATTGCCTCGCCG
ATACTGGGTAATCTTCTACAGCAATCCAAAGTAAAAAATGGTATCAGATCCATAAAGATT
CTTGGGGTTCCCCATGATGCTGTCTTTATATTCATTCGTTTCCTCTACTCAGCCTGTTAT
GAAGAAAGAGAAATGAAGAAGTTTGTTCTTCATCTGTTAGTCTTATCACATTCTTATTCA
GTACCATCACTTAAAAGAGTCTGCATACACCTTTTGGAGCAGGGTTGGTTGAGCCCTGAA
AATGTGATAGATGTGCTTCAGTTAGGAAGGAACTGTGATGTACCACGACTTATTGTTGTT
TGTATTCGTATGATAGTGAGGAACTTCATAACCATATCATCCTCCGAGGGATGGGAAGTG
ATGAGACGTGCTAACCCTATGCTTGAACAAGAACTTGTAGAATATGTTGTTGATGCAGAT
TCGATAACACAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400009498
PEP Infomation

pacid=37447428 transcript=PGSC0003DMT400013718 locus=PGSC0003DMG400005366 ID=PGSC0003DMT400013718.v4.03 annot-version=v4.03
Sequence

MASPEIDYPRLSSGSESFGGCFNIRIEGEDSRHTLDFHEDRKCPVYNARNIPEPPPPPGK
ICLKSITHERGHGKSDRVPNETRDTWDKLFKDGYGADVHISTDNGSFILAHSTLLRIASP
ILGNLLQQSKVKNGIRSIKILGVPHDAVFIFIRFLYSACYEEREMKKFVLHLLVLSHSYS
VPSLKRVCIHLLEQGWLSPENVIDVLQLGRNCDVPRLIVVCIRMIVRNFITISSSEGWEV
MRRANPMLEQELVEYVVDADSITQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400013718
Transcript Infomation

pacid=37447428 locus=PGSC0003DMG400005366 ID=PGSC0003DMT400013718.v4.03 annot-version=v4.03
Sequence

ATGGCATCGCCTGAAATTGATTATCCCAGGTTATCCTCGGGTTCTGAATCTTTTGGTGGA
TGCTTTAACATACGAATAGAAGGAGAAGACTCGAGACACACTTTGGATTTTCATGAAGAT
CGAAAGTGTCCAGTTTATAATGCACGTAATATCCCAGAGCCTCCACCTCCTCCTGGTAAA
ATCTGTTTGAAATCCATTACTCATGAAAGAGGACATGGTAAGTCTGATCGTGTCCCTAAT
GAAACTCGAGATACATGGGACAAGCTTTTTAAAGATGGATATGGAGCAGATGTACATATA
AGTACTGATAATGGATCATTTATTCTTGCTCATTCTACTCTTTTGAGGATTGCCTCGCCG
ATACTGGGTAATCTTCTACAGCAATCCAAAGTAAAAAATGGTATCAGATCCATAAAGATT
CTTGGGGTTCCCCATGATGCTGTCTTTATATTCATTCGTTTCCTCTACTCAGCCTGTTAT
GAAGAAAGAGAAATGAAGAAGTTTGTTCTTCATCTGTTAGTCTTATCACATTCTTATTCA
GTACCATCACTTAAAAGAGTCTGCATACACCTTTTGGAGCAGGGTTGGTTGAGCCCTGAA
AATGTGATAGATGTGCTTCAGTTAGGAAGGAACTGTGATGTACCACGACTTATTGTTGTT
TGTATTCGTATGATAGTGAGGAACTTCATAACCATATCATCCTCCGAGGGATGGGAAGTG
ATGAGACGTGCTAACCCTATGCTTGAACAAGAACTTGTAGAATATGTTGTTGATGCAGAT
TCGATAACACAGTAA