Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013664
CDS Infomation

pacid=37451210 polypeptide=PGSC0003DMP400009458 locus=PGSC0003DMG400005339 ID=PGSC0003DMT400013664.v4.03 annot-version=v4.03
Sequence

ATGGATTCACAATCACCAAATGGTTCAATTATCTTCTCTACTGTTGGTAGAACCAATTAC
GGTTTCGATATCTTCTCCCTCAAATCTCCATTGTCTTTTCTCAATTCCCCAATCACGGAG
CACCGTCTCACAGACGGTGCATCCGTCAATTTCAACGGTCAATTCATTGACGAAGACCAA
ACACTGGTCTTCGTCTCTGAAAGATCAGGTGCTCCTCGCATTTACTTGAGACAACACCCC
TCAGGAATCGAACTAATTCCTACTTCAATTAATAGCTTATTTCTCGATTGTCCGATTCTT
CGGAATAATCGCCTCTATTACATCTCAGCTCATCAGCATTCCGAAAAAAAATTCACAAGC
TCCTCTGCTCTTTACTGCACTAATATCGAAGGTGACAATGAGGTAACAAGATTGACTCCA
GAAGGATCCGTTGATTATAGTCCTTCGATTTCAAAATCTGGACACATGATTGCTGTTGCG
TCCTATGGAAATCGTCGTTGGCCTACCGATGAATTTCATGATCTGAGTACTGATATTGTT
GTTTTCCCTGTATCTAAACCTGATATGAGAACAATTGTGTGTAGACACGGTGGCTGGCCA
ACTTGGTCCGGTGATTCGACGATTTATTTTCATCGACAAGCTGATGATGGATGGTGGAGC
ATTTTCAAAGTCGATTTGCCAGACGATTTATCCAATTTGGTTGATGAGAGTAATGGTTCG
ATTCGAATTACTCCACCTGGTGTGCATTGCTTTACACCTGCAGCAGCAGTAGCATCAGAC
CGCTCTAAATCATCAATTATTGCTGTTGCAACTCGAAGACCCGGAAAGAGCTATCGCCAC
ATCGAGATTTTCGATGTGGAGTCTCAAAAGTTTTTTCCGGTGACGGAATTGATTAATCCT
ACCATTCACCATTACAATCCCTTCTTCTCTCCTGAATCGACTTTCCTCGGTTATCACAGA
TATCGAGGCGAATCGTGTTCAGGAGAAACAACAATTCCTTACTTGGACCCTGTAATTTCT
CCGGAAAACGGACTGAAAATGCTGAGGCTTAATGGATTCTTCCCTGCATCCTCTCCGTCC
GGTGAATTCATTGCATTCAATCCGGGATTCACAGGACTAGAAATCGTCAAATCAGATGGA
TCGAAAAAATGGACATTGATTAAAGATCGCACATCTTTCTGCAATTCGTGGTCTCCAGCT
GAACCTGGCGTGATTTTTACATCAATCGGACCTATATTTGAATCAGTAAAAACAACTGTA
CAAATAGCGCGTGTTTCGTTCAGTTCATTGAACCTTAATGACGATGAAATTCCGGTAGAT
ATAAAAGTTCTAACAGGGGAAGAGACTGGTAACAACGCATTTCCTTCTTGTTCGCCTGAT
GGAAAGCATATAGTATTTCGTTCAGGTCGTTCGGGGCATAAGAATCTGTATATTATCGAT
GCAGTCAATGGAGAAATGGAGGGAGGAGAAATTCGTCAGTTAACGAATGGGGCATGGATT
GATACGATGCCAAATTGGTCACCTGACGGGAAACTAATTGCATTTTCTTCCAACATGCAC
AATCCGGATGACATTAATTGTTTCAGCATCTACGTTGTTCATCCGGATGGATCAGGGCTC
CGGAGGATCTATGTGGCAGGGCCGGAGGGATCAGAGGAAGTAGATAAAGAGAGATTAAAT
CATGTATGTTTTAGTAAGGACAGTGAATGGCTCTTGTTTACGGGCAATTTGAGCGGAGTG
ACAGCAGAACCGGTGTCATTGCCAAATCAGTTTCAGCCGTATGGTGATTTATATGTGGTG
AAATTGGATGGGAGTGGATTGAGACGATTGACGTGTAACGGATATGAGAATGGAACTCCA
GCTTGGCACTCCTCGACTATGCCAATGGAGACTACTACAGGGGAAACAGAACGGAACGTA
CTAGTAGGAGAGAAGTTAAAGGGTGAATTTGACGATGTGCTATGGATGAAGTGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400009458
PEP Infomation

pacid=37451210 transcript=PGSC0003DMT400013664 locus=PGSC0003DMG400005339 ID=PGSC0003DMT400013664.v4.03 annot-version=v4.03
Sequence

MDSQSPNGSIIFSTVGRTNYGFDIFSLKSPLSFLNSPITEHRLTDGASVNFNGQFIDEDQ
TLVFVSERSGAPRIYLRQHPSGIELIPTSINSLFLDCPILRNNRLYYISAHQHSEKKFTS
SSALYCTNIEGDNEVTRLTPEGSVDYSPSISKSGHMIAVASYGNRRWPTDEFHDLSTDIV
VFPVSKPDMRTIVCRHGGWPTWSGDSTIYFHRQADDGWWSIFKVDLPDDLSNLVDESNGS
IRITPPGVHCFTPAAAVASDRSKSSIIAVATRRPGKSYRHIEIFDVESQKFFPVTELINP
TIHHYNPFFSPESTFLGYHRYRGESCSGETTIPYLDPVISPENGLKMLRLNGFFPASSPS
GEFIAFNPGFTGLEIVKSDGSKKWTLIKDRTSFCNSWSPAEPGVIFTSIGPIFESVKTTV
QIARVSFSSLNLNDDEIPVDIKVLTGEETGNNAFPSCSPDGKHIVFRSGRSGHKNLYIID
AVNGEMEGGEIRQLTNGAWIDTMPNWSPDGKLIAFSSNMHNPDDINCFSIYVVHPDGSGL
RRIYVAGPEGSEEVDKERLNHVCFSKDSEWLLFTGNLSGVTAEPVSLPNQFQPYGDLYVV
KLDGSGLRRLTCNGYENGTPAWHSSTMPMETTTGETERNVLVGEKLKGEFDDVLWMKC*

Transcript Sequence

Transcript ID

PGSC0003DMT400013664
Transcript Infomation

pacid=37451210 locus=PGSC0003DMG400005339 ID=PGSC0003DMT400013664.v4.03 annot-version=v4.03
Sequence

ATGGATTCACAATCACCAAATGGTTCAATTATCTTCTCTACTGTTGGTAGAACCAATTAC
GGTTTCGATATCTTCTCCCTCAAATCTCCATTGTCTTTTCTCAATTCCCCAATCACGGAG
CACCGTCTCACAGACGGTGCATCCGTCAATTTCAACGGTCAATTCATTGACGAAGACCAA
ACACTGGTCTTCGTCTCTGAAAGATCAGGTGCTCCTCGCATTTACTTGAGACAACACCCC
TCAGGAATCGAACTAATTCCTACTTCAATTAATAGCTTATTTCTCGATTGTCCGATTCTT
CGGAATAATCGCCTCTATTACATCTCAGCTCATCAGCATTCCGAAAAAAAATTCACAAGC
TCCTCTGCTCTTTACTGCACTAATATCGAAGGTGACAATGAGGTAACAAGATTGACTCCA
GAAGGATCCGTTGATTATAGTCCTTCGATTTCAAAATCTGGACACATGATTGCTGTTGCG
TCCTATGGAAATCGTCGTTGGCCTACCGATGAATTTCATGATCTGAGTACTGATATTGTT
GTTTTCCCTGTATCTAAACCTGATATGAGAACAATTGTGTGTAGACACGGTGGCTGGCCA
ACTTGGTCCGGTGATTCGACGATTTATTTTCATCGACAAGCTGATGATGGATGGTGGAGC
ATTTTCAAAGTCGATTTGCCAGACGATTTATCCAATTTGGTTGATGAGAGTAATGGTTCG
ATTCGAATTACTCCACCTGGTGTGCATTGCTTTACACCTGCAGCAGCAGTAGCATCAGAC
CGCTCTAAATCATCAATTATTGCTGTTGCAACTCGAAGACCCGGAAAGAGCTATCGCCAC
ATCGAGATTTTCGATGTGGAGTCTCAAAAGTTTTTTCCGGTGACGGAATTGATTAATCCT
ACCATTCACCATTACAATCCCTTCTTCTCTCCTGAATCGACTTTCCTCGGTTATCACAGA
TATCGAGGCGAATCGTGTTCAGGAGAAACAACAATTCCTTACTTGGACCCTGTAATTTCT
CCGGAAAACGGACTGAAAATGCTGAGGCTTAATGGATTCTTCCCTGCATCCTCTCCGTCC
GGTGAATTCATTGCATTCAATCCGGGATTCACAGGACTAGAAATCGTCAAATCAGATGGA
TCGAAAAAATGGACATTGATTAAAGATCGCACATCTTTCTGCAATTCGTGGTCTCCAGCT
GAACCTGGCGTGATTTTTACATCAATCGGACCTATATTTGAATCAGTAAAAACAACTGTA
CAAATAGCGCGTGTTTCGTTCAGTTCATTGAACCTTAATGACGATGAAATTCCGGTAGAT
ATAAAAGTTCTAACAGGGGAAGAGACTGGTAACAACGCATTTCCTTCTTGTTCGCCTGAT
GGAAAGCATATAGTATTTCGTTCAGGTCGTTCGGGGCATAAGAATCTGTATATTATCGAT
GCAGTCAATGGAGAAATGGAGGGAGGAGAAATTCGTCAGTTAACGAATGGGGCATGGATT
GATACGATGCCAAATTGGTCACCTGACGGGAAACTAATTGCATTTTCTTCCAACATGCAC
AATCCGGATGACATTAATTGTTTCAGCATCTACGTTGTTCATCCGGATGGATCAGGGCTC
CGGAGGATCTATGTGGCAGGGCCGGAGGGATCAGAGGAAGTAGATAAAGAGAGATTAAAT
CATGTATGTTTTAGTAAGGACAGTGAATGGCTCTTGTTTACGGGCAATTTGAGCGGAGTG
ACAGCAGAACCGGTGTCATTGCCAAATCAGTTTCAGCCGTATGGTGATTTATATGTGGTG
AAATTGGATGGGAGTGGATTGAGACGATTGACGTGTAACGGATATGAGAATGGAACTCCA
GCTTGGCACTCCTCGACTATGCCAATGGAGACTACTACAGGGGAAACAGAACGGAACGTA
CTAGTAGGAGAGAAGTTAAAGGGTGAATTTGACGATGTGCTATGGATGAAGTGTTGA