Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013520
CDS Infomation

pacid=37444483 polypeptide=PGSC0003DMP400009373 locus=PGSC0003DMG400005279 ID=PGSC0003DMT400013520.v4.03 annot-version=v4.03
Sequence

ATGACTACATTTATGTATTTGTGTTCTCTAATATTGATGTGTATCTTAGTGTCTAGCAAT
GCTCAATTACAACAAAACTTCTATGCCAAGAGTTGTCCAAAAGCAGAAAAGATCATTTTA
GAGTATGTTCACAAACACATTCCAAATGCCCCATCTCTTGCTGCTGCCTTAATCAGAATG
CATTTCCATGATTGCTTTGTCAGGGGATGTGATGCATCTGTGCTCTTGAATTTTACTTCA
AGTTCTGGAAGTCAAACTGAAAAAGTTGGTATCCCAAATCTAACACTTAGAGGTTTCTCA
TTCATTGATGATATCAAGAAAATAATTGAAGCTGAATGTCCTGGAGTTGTCTCATGTGCT
GATATTATTTCATTGGTTGCTAGAGACTCTATTGTGGTCATAGGAGGTCCTTTTTGGAAT
GTACCAACTGGAAGAAGAGATGGAACAATCTCTATTGCTTCAGAAACTTTATCAGACATC
CCATCTCCATTTAGTAACTTTTCCACTCTCCAAAATGATTTTGCTAAGAAGGGTCTTGAC
CTCAAAGACTTGGTCCTATTATCTGGTGCTCACACTATTGGAGTCTCTCTTTGCACGTCA
TTTTCAAACCGTCTATACAATTTTACTGGAACTTTTGGTACTCAAGATCCATCTCTAGAC
AGCGAATATGCAGCTAACTTGAAGGCAAAGAAATGCAAATCAATCAACGATAACACAACA
ATAGTTGAGATGGATCCAGGGAGTTTCAAGACATTTGATCTTAGCTATTACAAGCTTTTA
CTCAAAAGGAGAGGACTCTTCCAATCCGATGCAGCCTTGACAACAAGTACAACAACGAAG
ACATACATCAACCAACTTGTCGCGGGATCACTTAAAGAGTTCTATGTTGAATTTGCTCAA
TCGATGGAGAAAATGGGAAGGATTGAAGTTAAAGCAGGCTCAACTGGTGAAATTAGAAAG
AATTGTGCCGTAGTGAATAGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400009373
PEP Infomation

pacid=37444483 transcript=PGSC0003DMT400013520 locus=PGSC0003DMG400005279 ID=PGSC0003DMT400013520.v4.03 annot-version=v4.03
Sequence

MTTFMYLCSLILMCILVSSNAQLQQNFYAKSCPKAEKIILEYVHKHIPNAPSLAAALIRM
HFHDCFVRGCDASVLLNFTSSSGSQTEKVGIPNLTLRGFSFIDDIKKIIEAECPGVVSCA
DIISLVARDSIVVIGGPFWNVPTGRRDGTISIASETLSDIPSPFSNFSTLQNDFAKKGLD
LKDLVLLSGAHTIGVSLCTSFSNRLYNFTGTFGTQDPSLDSEYAANLKAKKCKSINDNTT
IVEMDPGSFKTFDLSYYKLLLKRRGLFQSDAALTTSTTTKTYINQLVAGSLKEFYVEFAQ
SMEKMGRIEVKAGSTGEIRKNCAVVNS*

Transcript Sequence

Transcript ID

PGSC0003DMT400013520
Transcript Infomation

pacid=37444483 locus=PGSC0003DMG400005279 ID=PGSC0003DMT400013520.v4.03 annot-version=v4.03
Sequence

ATGACTACATTTATGTATTTGTGTTCTCTAATATTGATGTGTATCTTAGTGTCTAGCAAT
GCTCAATTACAACAAAACTTCTATGCCAAGAGTTGTCCAAAAGCAGAAAAGATCATTTTA
GAGTATGTTCACAAACACATTCCAAATGCCCCATCTCTTGCTGCTGCCTTAATCAGAATG
CATTTCCATGATTGCTTTGTCAGGGGATGTGATGCATCTGTGCTCTTGAATTTTACTTCA
AGTTCTGGAAGTCAAACTGAAAAAGTTGGTATCCCAAATCTAACACTTAGAGGTTTCTCA
TTCATTGATGATATCAAGAAAATAATTGAAGCTGAATGTCCTGGAGTTGTCTCATGTGCT
GATATTATTTCATTGGTTGCTAGAGACTCTATTGTGGTCATAGGAGGTCCTTTTTGGAAT
GTACCAACTGGAAGAAGAGATGGAACAATCTCTATTGCTTCAGAAACTTTATCAGACATC
CCATCTCCATTTAGTAACTTTTCCACTCTCCAAAATGATTTTGCTAAGAAGGGTCTTGAC
CTCAAAGACTTGGTCCTATTATCTGGTGCTCACACTATTGGAGTCTCTCTTTGCACGTCA
TTTTCAAACCGTCTATACAATTTTACTGGAACTTTTGGTACTCAAGATCCATCTCTAGAC
AGCGAATATGCAGCTAACTTGAAGGCAAAGAAATGCAAATCAATCAACGATAACACAACA
ATAGTTGAGATGGATCCAGGGAGTTTCAAGACATTTGATCTTAGCTATTACAAGCTTTTA
CTCAAAAGGAGAGGACTCTTCCAATCCGATGCAGCCTTGACAACAAGTACAACAACGAAG
ACATACATCAACCAACTTGTCGCGGGATCACTTAAAGAGTTCTATGTTGAATTTGCTCAA
TCGATGGAGAAAATGGGAAGGATTGAAGTTAAAGCAGGCTCAACTGGTGAAATTAGAAAG
AATTGTGCCGTAGTGAATAGTTAA