Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013488
CDS Infomation

pacid=37459873 polypeptide=PGSC0003DMP400009346 locus=PGSC0003DMG400005261 ID=PGSC0003DMT400013488.v4.03 annot-version=v4.03
Sequence

ATGAAGAACACAACACCTTTTCTAATAATCTCCCTTCTTATTCTTCTTCTTGTTGTTTTT
CCTATGAGATTCTCTTCATTGGTGTTCATTCTAATTATTTTTGGTATTAATGGGGTATTT
TACATGTTGTATAATACTCTATGGTTAAAGTCATCTGAGAGACTTAGATGGAAACTTAAG
AAACAAGGCATATATGGTCCAAAACCATCATTTTTATATGGAAATGTTGCTGAAATGCAA
AAGATTCAAGCTGCATCTCCCAACAATAATAATGTCTATGCTGAATGTGTAGCACATGAT
TATACTTCTTCACTCTTTCCCTACTTTGAACAATGGCGAAAAATATACGGTCCTGTATTT
ACATATTCAACTGGAAACAAACAACATTTGTATGTGAACCAACCAGAGCTAGTGAAGGAA
ATGAACCAAAGTATTAGCCTGGATTTAGGAAAACCTTCTTATGTCACTAAGAGACTTGCC
CCTATGCTTGGAAATGGTATTTTGAGGTCTAATGGCCATATTTGGGCCATGCAAAGGAAA
ATCGTAGCACCTGAATTCTTCATGGACAAGGTCAAGGGAATGGTGAGCCTGATGTTGCAG
TCAGCAGCGTTATTAACCATGAAATGGGATGAAAGGATTGAAGCTGAAGGGGGCAAAATG
GCAGAAATTAGTGTGGGAGAGGATCTGAGAAGCCTCTCAGCAGATGTGATCTCAAGGGCT
TGCTTTGGGAGCTCTTATTTCAAAGGCAAAAACATTTTTTCAAAGCTTCGAACTCTTCAA
AAAGTCATATCAAACACAAGCATTCTTTTTGGTTCTCCTGCATTAGGGTTTCTTCCGAGT
AGACAGCAAAAGGAGATTGAGATCTTAGAGAAGGAGATAGAGTCGTTGATATGGGAAGCA
GTGAAAGAAAGAGAAAGGGATCAATGCTTAGAAACACATTCAAATGAGAAAGACTTACTG
CATTCGATACTCGAGGGAGCTATCAATGATGGCAACGTAGGTGAGAATTCGTCAAGGAAA
TTCATAGTTGACAATTGCAAGAACATATACTTTGCAGGTCATGAGTCCACTGCTGTTGCT
GCATCATGGTGCCTCATGCTTCTTGCTCTACATCCAGAATGGCAATCTCGTATCCGTGAG
GAAATGGCTCAGATTTGCCCTGATGGTGTCCTAGATGCAGAGTCTGTCTCCAAGATGAAA
ATGGTGACAATGGTCATTCAAGAAGTGATGCGTTTATATCCACCAGCAGCATTTGTGTCA
AGAGAGGCATTAGAAGACACACAAATTGGTCACATTGTTGTGCCAAAAGGTGTATGCTTG
TGGACCTTGATCCCGACTCTTCATCGTGACCCTGAGATATGGGGACGAGATGCCAATGAA
TTCAAGCCAGAGAGGTTTGAAAATGGAGTTTCGGGTGCTTGTAAATTGCCACAAGTTTAT
ATCCCATTCGGACTAGGTCCTCGTCTCTGCCTAGGCAGGAATTTCGCGATGGTGCAGCTC
AAGGTTGTTATTTCACTCATTATTTCAAAGTTTCGTTTCTCTCTATCTCCCAAATACAAA
CACTCGCCGGCTTATAGGATGATTGTAGAGCCAGGCCAAGGAGTACACATTCTTGTTGAG
AGATTGAAGCAATGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400009346
PEP Infomation

pacid=37459873 transcript=PGSC0003DMT400013488 locus=PGSC0003DMG400005261 ID=PGSC0003DMT400013488.v4.03 annot-version=v4.03
Sequence

MKNTTPFLIISLLILLLVVFPMRFSSLVFILIIFGINGVFYMLYNTLWLKSSERLRWKLK
KQGIYGPKPSFLYGNVAEMQKIQAASPNNNNVYAECVAHDYTSSLFPYFEQWRKIYGPVF
TYSTGNKQHLYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGILRSNGHIWAMQRK
IVAPEFFMDKVKGMVSLMLQSAALLTMKWDERIEAEGGKMAEISVGEDLRSLSADVISRA
CFGSSYFKGKNIFSKLRTLQKVISNTSILFGSPALGFLPSRQQKEIEILEKEIESLIWEA
VKERERDQCLETHSNEKDLLHSILEGAINDGNVGENSSRKFIVDNCKNIYFAGHESTAVA
ASWCLMLLALHPEWQSRIREEMAQICPDGVLDAESVSKMKMVTMVIQEVMRLYPPAAFVS
REALEDTQIGHIVVPKGVCLWTLIPTLHRDPEIWGRDANEFKPERFENGVSGACKLPQVY
IPFGLGPRLCLGRNFAMVQLKVVISLIISKFRFSLSPKYKHSPAYRMIVEPGQGVHILVE
RLKQC*

Transcript Sequence

Transcript ID

PGSC0003DMT400013488
Transcript Infomation

pacid=37459873 locus=PGSC0003DMG400005261 ID=PGSC0003DMT400013488.v4.03 annot-version=v4.03
Sequence

ATGAAGAACACAACACCTTTTCTAATAATCTCCCTTCTTATTCTTCTTCTTGTTGTTTTT
CCTATGAGATTCTCTTCATTGGTGTTCATTCTAATTATTTTTGGTATTAATGGGGTATTT
TACATGTTGTATAATACTCTATGGTTAAAGTCATCTGAGAGACTTAGATGGAAACTTAAG
AAACAAGGCATATATGGTCCAAAACCATCATTTTTATATGGAAATGTTGCTGAAATGCAA
AAGATTCAAGCTGCATCTCCCAACAATAATAATGTCTATGCTGAATGTGTAGCACATGAT
TATACTTCTTCACTCTTTCCCTACTTTGAACAATGGCGAAAAATATACGGTCCTGTATTT
ACATATTCAACTGGAAACAAACAACATTTGTATGTGAACCAACCAGAGCTAGTGAAGGAA
ATGAACCAAAGTATTAGCCTGGATTTAGGAAAACCTTCTTATGTCACTAAGAGACTTGCC
CCTATGCTTGGAAATGGTATTTTGAGGTCTAATGGCCATATTTGGGCCATGCAAAGGAAA
ATCGTAGCACCTGAATTCTTCATGGACAAGGTCAAGGGAATGGTGAGCCTGATGTTGCAG
TCAGCAGCGTTATTAACCATGAAATGGGATGAAAGGATTGAAGCTGAAGGGGGCAAAATG
GCAGAAATTAGTGTGGGAGAGGATCTGAGAAGCCTCTCAGCAGATGTGATCTCAAGGGCT
TGCTTTGGGAGCTCTTATTTCAAAGGCAAAAACATTTTTTCAAAGCTTCGAACTCTTCAA
AAAGTCATATCAAACACAAGCATTCTTTTTGGTTCTCCTGCATTAGGGTTTCTTCCGAGT
AGACAGCAAAAGGAGATTGAGATCTTAGAGAAGGAGATAGAGTCGTTGATATGGGAAGCA
GTGAAAGAAAGAGAAAGGGATCAATGCTTAGAAACACATTCAAATGAGAAAGACTTACTG
CATTCGATACTCGAGGGAGCTATCAATGATGGCAACGTAGGTGAGAATTCGTCAAGGAAA
TTCATAGTTGACAATTGCAAGAACATATACTTTGCAGGTCATGAGTCCACTGCTGTTGCT
GCATCATGGTGCCTCATGCTTCTTGCTCTACATCCAGAATGGCAATCTCGTATCCGTGAG
GAAATGGCTCAGATTTGCCCTGATGGTGTCCTAGATGCAGAGTCTGTCTCCAAGATGAAA
ATGGTGACAATGGTCATTCAAGAAGTGATGCGTTTATATCCACCAGCAGCATTTGTGTCA
AGAGAGGCATTAGAAGACACACAAATTGGTCACATTGTTGTGCCAAAAGGTGTATGCTTG
TGGACCTTGATCCCGACTCTTCATCGTGACCCTGAGATATGGGGACGAGATGCCAATGAA
TTCAAGCCAGAGAGGTTTGAAAATGGAGTTTCGGGTGCTTGTAAATTGCCACAAGTTTAT
ATCCCATTCGGACTAGGTCCTCGTCTCTGCCTAGGCAGGAATTTCGCGATGGTGCAGCTC
AAGGTTGTTATTTCACTCATTATTTCAAAGTTTCGTTTCTCTCTATCTCCCAAATACAAA
CACTCGCCGGCTTATAGGATGATTGTAGAGCCAGGCCAAGGAGTACACATTCTTGTTGAG
AGATTGAAGCAATGTTGA