Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013477
CDS Infomation

pacid=37459901 polypeptide=PGSC0003DMP400009339 locus=PGSC0003DMG400005258 ID=PGSC0003DMT400013477.v4.03 annot-version=v4.03
Sequence

ATGGCATCTCAAATAATTAGAGAATGGGCCGGAATACAGCAGTTTCCAGCTGCCACTCAA
TCAAAGTTGCTTGAATTACTGGGAAAACTGAAGCAGGAGAATGTCAGTACTCTGACAATT
CTAGTAATGGGGAAAGGTGGTGTTGGAAAATCATCAACGGTGAACTCAATTATCGGGGAA
AGAGCAGTTGCTGTTAGTGCATTTCAGTCAGAAACTCCCAGACCGGTGATGGTTTCGCGT
TCACGAGCAGGGTTTACACTAAACATAATTGACACCCCAGGGCTAGTTGAAGGAGGATAC
GTCAATGACCAGGCTCTTGATCTCATAAAGAAGTTCCTGTTGAACAAGACAATTGATGTT
TTGCTATATGTGGATCGTCTGGATGCATATAGAGTGGATAACTTGGATAAGCAGATTGTG
AAGGCTATTACTGATAGTTTTGGTAAGGAAATATGGCGCCGAGGAATTGTAGTTCTCACT
CATGCTCAGCTTTCCCCTCCTGATGGATTGACTTATGATGAATTCACGTCCCGAAGATCA
GAGGCACTTTTGAAAATCGTCCGGATGGGTGCTCGAATTAGGAAACAAGACATTCAGGCT
GCTTCAATTCCTGTTGTCTTGGTGGAGAATAGTGGCAGATGTAACAAGAATGAAAGTGAC
GAAAAGATTCTTCCAAGTGGAACTGCATGGATACCCAATTTAGTCCAAACTATTACAGAT
GCTGTTTTAAGTGGAAGCAAGGGTATTTTGGTTGACCAGAAACTGATTGAAGGTCCAAAT
CCAAACAACAGGGGCAAAGTGCTAATTCCTTTTATACTAGCGTTCCAGTATTTCTTTGTA
GTGAAAAGGATTCAGAAATCTATCAAGAATGATATTGCAAGGGAGAGCAGGCCTGCATGG
GCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400009339
PEP Infomation

pacid=37459901 transcript=PGSC0003DMT400013477 locus=PGSC0003DMG400005258 ID=PGSC0003DMT400013477.v4.03 annot-version=v4.03
Sequence

MASQIIREWAGIQQFPAATQSKLLELLGKLKQENVSTLTILVMGKGGVGKSSTVNSIIGE
RAVAVSAFQSETPRPVMVSRSRAGFTLNIIDTPGLVEGGYVNDQALDLIKKFLLNKTIDV
LLYVDRLDAYRVDNLDKQIVKAITDSFGKEIWRRGIVVLTHAQLSPPDGLTYDEFTSRRS
EALLKIVRMGARIRKQDIQAASIPVVLVENSGRCNKNESDEKILPSGTAWIPNLVQTITD
AVLSGSKGILVDQKLIEGPNPNNRGKVLIPFILAFQYFFVVKRIQKSIKNDIARESRPAW
A*

Transcript Sequence

Transcript ID

PGSC0003DMT400013477
Transcript Infomation

pacid=37459901 locus=PGSC0003DMG400005258 ID=PGSC0003DMT400013477.v4.03 annot-version=v4.03
Sequence

ATGGCATCTCAAATAATTAGAGAATGGGCCGGAATACAGCAGTTTCCAGCTGCCACTCAA
TCAAAGTTGCTTGAATTACTGGGAAAACTGAAGCAGGAGAATGTCAGTACTCTGACAATT
CTAGTAATGGGGAAAGGTGGTGTTGGAAAATCATCAACGGTGAACTCAATTATCGGGGAA
AGAGCAGTTGCTGTTAGTGCATTTCAGTCAGAAACTCCCAGACCGGTGATGGTTTCGCGT
TCACGAGCAGGGTTTACACTAAACATAATTGACACCCCAGGGCTAGTTGAAGGAGGATAC
GTCAATGACCAGGCTCTTGATCTCATAAAGAAGTTCCTGTTGAACAAGACAATTGATGTT
TTGCTATATGTGGATCGTCTGGATGCATATAGAGTGGATAACTTGGATAAGCAGATTGTG
AAGGCTATTACTGATAGTTTTGGTAAGGAAATATGGCGCCGAGGAATTGTAGTTCTCACT
CATGCTCAGCTTTCCCCTCCTGATGGATTGACTTATGATGAATTCACGTCCCGAAGATCA
GAGGCACTTTTGAAAATCGTCCGGATGGGTGCTCGAATTAGGAAACAAGACATTCAGGCT
GCTTCAATTCCTGTTGTCTTGGTGGAGAATAGTGGCAGATGTAACAAGAATGAAAGTGAC
GAAAAGATTCTTCCAAGTGGAACTGCATGGATACCCAATTTAGTCCAAACTATTACAGAT
GCTGTTTTAAGTGGAAGCAAGGGTATTTTGGTTGACCAGAAACTGATTGAAGGTCCAAAT
CCAAACAACAGGGGCAAAGTGCTAATTCCTTTTATACTAGCGTTCCAGTATTTCTTTGTA
GTGAAAAGGATTCAGAAATCTATCAAGAATGATATTGCAAGGGAGAGCAGGCCTGCATGG
GCATAA