Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013448
CDS Infomation

pacid=37460765 polypeptide=PGSC0003DMP400009319 locus=PGSC0003DMG400005248 ID=PGSC0003DMT400013448.v4.03 annot-version=v4.03
Sequence

ATGGCGATCACTCCTTTTTCTTCAGTAACAGCCAACTCCGTTATCTTAAGATACCGCCAT
TTCTCTACTCTTGTTCAGATTTTCTCCGAACAAACCACCAAGACCAAAAATGGCAAACAC
CTTGATAATCCCAAGCCGAAATCATCTTCTTCTAAATCCAAGAAAGCTAGAAATATTGCC
AGTATCATCAACACAAACCCATGGTCATCTCATCTTGAATCTTCTCTTTCCTCACTCACT
CAACCCTCCCTCTCTCACACCACTGTCCTTCACACACTCCGCTTCATCAAGATACCTTTC
AAAGCTCTTTACTTCTTCAACTGGACTCAAAAAATGGGTTTTCAACACACCCATCAATCG
TATTTACTCATGTTGCAACTCCTCGGCAGTTCCCGCAGCTTAAATTCAGCAAGGAACTTT
CTTTTATCTATACCCAGAAGGTCTAATGGTACTGTACCGCTTCAAGATAGGTACTTTAAC
ACTTTGATTCAAAGTTATGGTAAAGCTGGGCTTTTTCAAGAATCATTGAAGGTGTTTAAA
GTGATGAAGTCACTTGGAATTTCACCCTCTGTGGTTACGTTTAATAGTTTGTTTTCAATT
TTGCTTAAGAGGGGTCGAACCGGTATGGTCTACGAACTGTTTGATGAAATGCTTAAGACA
TTTGGTGCCAAGCCTGATGTGTATACTTTTAACATTTTGATTAGAGGATTTTGTATGAAC
TCCATGGTTGATAAAGGATTTAGGTTTTTTAAGGAGATGGAAAGGCATGAATGTGAACCG
GATGTGATTACATACAATACGATTGTTGACGGTTTGTGTAGGGCAGGGAAAGTGGAGATT
GCACACAACGTGTTAAAGGGTATGGTCAAGAGGGGTCATCAATTGAGTCCTAATGTTGTA
AGCTACACCACTTTGGTTAGAGGGTATTGTGAGAAGCAAGAGGTTGAACGGGCTCTTGAT
GTTTTTGAGGAAATGATAGATTGTGGTCTAAAACCGACCAGTATAACTTATAATACTCTT
GTACAAGGTCTTTGTGAGGCTAAAAGATTTGACAGAATAAAGGAGATCTTGGAGGGGACT
CTAGGAAGTGGAGGACTTATTCCAGATACATGTACTTTCAATACATTGATTACCTTTCAC
TGTAATGTGGGAAATCTGGATGAAGCAGTGAAAGTTTTTGAGAATATGTTATACTTAAAG
GTGAAACCTGATTCAGCAACATATAGCATCCTAATACGGAGCTTTTGTCAAAAGGGATAC
TTTGATAGGGCAGAGAAATTATTTGATGACCTAATGAAGAAGGAGATATTGCTTCGTGAT
GATGGTTGTACACCTCTCATTGCAGCATACAATCCCATGTTTGAGTATTTCTGCAAGATT
GGCAAGACAAAGAAGGCTGAGAAAGTATTCAGGCAACTAATGAGAAGAGGAACTCAGGAT
CCTTTTGCTTATGAACTCCTTATAATGGGGCATTGTAAAGAAGGCACATTTAATGATGCA
CACGAACTCTTAGTTTTGATGTTGAGGAGAGATTATGTACCTAATATTGTGATTTATGAG
TCCCTGATTGAAGGTTTGCTGCAAAAGAATGACCCTAAAGTTGCTTACGATACTCTAGAG
AAGATGTTGAAAAGCTCCCATCTTCCGAGATCTTCAACTTTCCATCAAATCCTTACAGAA
CTTATCAAGAAAAATTGTGCTAGTGAATGTGCTTCCTTGGTGACACTAATGTTAGATAAC
AAAGTTAGACAAAACATCAATCTTTCGACTGATACTGTGAGGATACTCTTCCAAGCAGGA
TTAAGGGAGAGAGCTTTTGAGATTGTTAGGTGCCTTTATGAAAATGAATATGTGGTAGAT
ATGGAAGGTTTAGTTGCTTTCCTTTGCCAGTGTAGAAAGTTATTGGAGGCATGCAAATTA
TTGTTATTTAGCTCAAGTAAGGGTCATATTCTGAATGTAGATACATGCAGTACTCTTTTA
TCTGCTCTCTGCAAAGCAAGTAGAACTTTAGAAGCATTTGAGATTTACTATGAGTTGCTC
GAGAAAGGAGTCCAACAGCCTTTAGAATGCGTAGAAGAGTTGGGGCTTGCTCTTGAAACT
GAAGGAAGAACTAAGGAAGCTGAATTTGTTAAAAAGAGAATCCCAGGCCAATCGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400009319
PEP Infomation

pacid=37460765 transcript=PGSC0003DMT400013448 locus=PGSC0003DMG400005248 ID=PGSC0003DMT400013448.v4.03 annot-version=v4.03
Sequence

MAITPFSSVTANSVILRYRHFSTLVQIFSEQTTKTKNGKHLDNPKPKSSSSKSKKARNIA
SIINTNPWSSHLESSLSSLTQPSLSHTTVLHTLRFIKIPFKALYFFNWTQKMGFQHTHQS
YLLMLQLLGSSRSLNSARNFLLSIPRRSNGTVPLQDRYFNTLIQSYGKAGLFQESLKVFK
VMKSLGISPSVVTFNSLFSILLKRGRTGMVYELFDEMLKTFGAKPDVYTFNILIRGFCMN
SMVDKGFRFFKEMERHECEPDVITYNTIVDGLCRAGKVEIAHNVLKGMVKRGHQLSPNVV
SYTTLVRGYCEKQEVERALDVFEEMIDCGLKPTSITYNTLVQGLCEAKRFDRIKEILEGT
LGSGGLIPDTCTFNTLITFHCNVGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQKGY
FDRAEKLFDDLMKKEILLRDDGCTPLIAAYNPMFEYFCKIGKTKKAEKVFRQLMRRGTQD
PFAYELLIMGHCKEGTFNDAHELLVLMLRRDYVPNIVIYESLIEGLLQKNDPKVAYDTLE
KMLKSSHLPRSSTFHQILTELIKKNCASECASLVTLMLDNKVRQNINLSTDTVRILFQAG
LRERAFEIVRCLYENEYVVDMEGLVAFLCQCRKLLEACKLLLFSSSKGHILNVDTCSTLL
SALCKASRTLEAFEIYYELLEKGVQQPLECVEELGLALETEGRTKEAEFVKKRIPGQS*

Transcript Sequence

Transcript ID

PGSC0003DMT400013448
Transcript Infomation

pacid=37460765 locus=PGSC0003DMG400005248 ID=PGSC0003DMT400013448.v4.03 annot-version=v4.03
Sequence

ATGGCGATCACTCCTTTTTCTTCAGTAACAGCCAACTCCGTTATCTTAAGATACCGCCAT
TTCTCTACTCTTGTTCAGATTTTCTCCGAACAAACCACCAAGACCAAAAATGGCAAACAC
CTTGATAATCCCAAGCCGAAATCATCTTCTTCTAAATCCAAGAAAGCTAGAAATATTGCC
AGTATCATCAACACAAACCCATGGTCATCTCATCTTGAATCTTCTCTTTCCTCACTCACT
CAACCCTCCCTCTCTCACACCACTGTCCTTCACACACTCCGCTTCATCAAGATACCTTTC
AAAGCTCTTTACTTCTTCAACTGGACTCAAAAAATGGGTTTTCAACACACCCATCAATCG
TATTTACTCATGTTGCAACTCCTCGGCAGTTCCCGCAGCTTAAATTCAGCAAGGAACTTT
CTTTTATCTATACCCAGAAGGTCTAATGGTACTGTACCGCTTCAAGATAGGTACTTTAAC
ACTTTGATTCAAAGTTATGGTAAAGCTGGGCTTTTTCAAGAATCATTGAAGGTGTTTAAA
GTGATGAAGTCACTTGGAATTTCACCCTCTGTGGTTACGTTTAATAGTTTGTTTTCAATT
TTGCTTAAGAGGGGTCGAACCGGTATGGTCTACGAACTGTTTGATGAAATGCTTAAGACA
TTTGGTGCCAAGCCTGATGTGTATACTTTTAACATTTTGATTAGAGGATTTTGTATGAAC
TCCATGGTTGATAAAGGATTTAGGTTTTTTAAGGAGATGGAAAGGCATGAATGTGAACCG
GATGTGATTACATACAATACGATTGTTGACGGTTTGTGTAGGGCAGGGAAAGTGGAGATT
GCACACAACGTGTTAAAGGGTATGGTCAAGAGGGGTCATCAATTGAGTCCTAATGTTGTA
AGCTACACCACTTTGGTTAGAGGGTATTGTGAGAAGCAAGAGGTTGAACGGGCTCTTGAT
GTTTTTGAGGAAATGATAGATTGTGGTCTAAAACCGACCAGTATAACTTATAATACTCTT
GTACAAGGTCTTTGTGAGGCTAAAAGATTTGACAGAATAAAGGAGATCTTGGAGGGGACT
CTAGGAAGTGGAGGACTTATTCCAGATACATGTACTTTCAATACATTGATTACCTTTCAC
TGTAATGTGGGAAATCTGGATGAAGCAGTGAAAGTTTTTGAGAATATGTTATACTTAAAG
GTGAAACCTGATTCAGCAACATATAGCATCCTAATACGGAGCTTTTGTCAAAAGGGATAC
TTTGATAGGGCAGAGAAATTATTTGATGACCTAATGAAGAAGGAGATATTGCTTCGTGAT
GATGGTTGTACACCTCTCATTGCAGCATACAATCCCATGTTTGAGTATTTCTGCAAGATT
GGCAAGACAAAGAAGGCTGAGAAAGTATTCAGGCAACTAATGAGAAGAGGAACTCAGGAT
CCTTTTGCTTATGAACTCCTTATAATGGGGCATTGTAAAGAAGGCACATTTAATGATGCA
CACGAACTCTTAGTTTTGATGTTGAGGAGAGATTATGTACCTAATATTGTGATTTATGAG
TCCCTGATTGAAGGTTTGCTGCAAAAGAATGACCCTAAAGTTGCTTACGATACTCTAGAG
AAGATGTTGAAAAGCTCCCATCTTCCGAGATCTTCAACTTTCCATCAAATCCTTACAGAA
CTTATCAAGAAAAATTGTGCTAGTGAATGTGCTTCCTTGGTGACACTAATGTTAGATAAC
AAAGTTAGACAAAACATCAATCTTTCGACTGATACTGTGAGGATACTCTTCCAAGCAGGA
TTAAGGGAGAGAGCTTTTGAGATTGTTAGGTGCCTTTATGAAAATGAATATGTGGTAGAT
ATGGAAGGTTTAGTTGCTTTCCTTTGCCAGTGTAGAAAGTTATTGGAGGCATGCAAATTA
TTGTTATTTAGCTCAAGTAAGGGTCATATTCTGAATGTAGATACATGCAGTACTCTTTTA
TCTGCTCTCTGCAAAGCAAGTAGAACTTTAGAAGCATTTGAGATTTACTATGAGTTGCTC
GAGAAAGGAGTCCAACAGCCTTTAGAATGCGTAGAAGAGTTGGGGCTTGCTCTTGAAACT
GAAGGAAGAACTAAGGAAGCTGAATTTGTTAAAAAGAGAATCCCAGGCCAATCGTAG