Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013372
CDS Infomation

pacid=37440163 polypeptide=PGSC0003DMP400009267 locus=PGSC0003DMG400005214 ID=PGSC0003DMT400013372.v4.03 annot-version=v4.03
Sequence

ATGGAAGAATCATTTGTGCCTTTTCGCGGAATCAAGAATGATCTTCATGGACGTCTATTG
TGCTACAAGCAAGATTGGACTAGTGGTATTAAGGCTGGCTTCAGGATCTTGGCACCAACT
ACATACATATTCTTTGCCTCAGCAATTCCAGTGATTTCATTTGGCGAGCAGCTGGAGAGA
AATACTGATGGAATTTTAACTGCTGTTCAAACATTAGCATCAACTGCAATTTGTGGAATT
ATACATTCCATTATTGGCGGTCAACCTTTGTTGATCTTAGGCGTTGCTGAACCAACTGTA
ATAATGTATACATTCATGTTCAACTTTGCTAAACAGAGACCTGATTTGGGTCCTGGTCTC
TTTCTAGCTTGGACTGGTTGGGTATGCGTCTGGACCGCGATTTTGCTTTTCTTGTTAGCA
ATTTTAGGAGCTTGCTCCATCATTAACAGGTTTACTCGTTTGGCTGGAGAACTATTTGGC
ATGCTTATTGCCATGCTCTTCATGCAGCAAGCTATTAAAGGCCTGGTAGATGAGTTTCGT
GTTCCAAAAAGAGACAATCCTCATTTAACCGAGTTCATGCCTTCGTGGAGATTTGCTAAT
GGAATGTTCGCGTTGGTTCTCTCATTTGGCCTACTGCTAACTGCTTTGAAAAGCCGAAAA
GCAAGATCATGGCGATATGGAACAGGTTGGCTTCGTAGTCTTATTGCAGACTACGGTGTG
CCACTTATGGTTGTAGTTTGGACAGCAGTTTCCTATATACCATCTGAAAGTGTTCCTGAA
AGAATTCCAAGACGCCTTGTCAGCCCAAACCCATGGTCACCCGGTGCTTATGAGAATTGG
ACTGTTATCAAGGACATGCTAAATGTACCAGTTCTCTACATACTCGGTGCTTTTGTTCCT
GCAACGATGATTGCTGTGCTTTACTATTTTGATCACAGTGTAGCATCCCAATTATCTCAG
CAGAAAGAGTTCAATCTCAGAAAGCCATCATCTTTCCATTATGACTTGCTTCTTTTGGGG
TTCTTGACACTAATGTGCGGCCTTGTTGGTATTCCTCCATCAAATGGTGTGATCCCACAA
TCCCCAATGCATACAAAAAGTCTGGCCACTCTTAAACACCAATTGCTTCGTAACAGACTA
GTCGACACAGCACGCAAAAGTATGCAGAAAAATTCAAGCTTGGGACAACTATATGGGAAT
ATGCAGGAAGCGTATCAACAGATGCAAACTCCTCTGATCTACCAGGAGCCATCAGCTAGA
AGTCTGAAGGAGTTAAAAGAATCAACAATTCAGTTAGCATCAAGCATGGGACACATCAAT
GCTCCTGTGGATGAAACCATTTTCGACGTTGAGAAGGAAATTGATGATTTGTTGCCTGTT
GAAGTGAAAGAACAGCGCGTTAGTAACTTGCTTCAAGCCACAATGGTTGGGGGATGTGTT
GCTGCTATGCCAGTTCTCAGAATGATTCCAACCTCAGTACTTTGGGGATATTTTGCGTAC
ATGGCCATTGAAAGTCTACCAGGCAATCAATTCTGGGAGAGAATATTACTACTATTCACT
GCACCAAGCAGACGATACAAAGTTCTAGAGGACTATCATGCTACTTTTGTAGAAACTGTT
CCTTTCAAGAGCATAGTAGCATTCACAATATTCCAAACACTCTACTTGCTTGCTTGCTTT
GGCATTACATGGGTTCCAATCGCCGGACTCCTTTTCCCTCTCTTGATCATGCTTTTGGTT
CCTGTGAGACAATACATATTGCCTAGGTTTTTCAAAGGGGCACACCTTCAAGATTTAGAT
GCAGCAGACTATGAAGAGTCACCCGCAGTTCCATTCAATCTTCCTATGGAGGGTGAATTT
GGTTCAAGACCTTCCCACGCAGAAAGCGGGGAGATTTTAGATGAAATGATCACTAGAAGC
AGGGGTGAGGTCAAGCGCATTAACAGTCCTAAGATCACAAGTTCAACAGCAACTCCAATA
AGAGATACCAAGCTCCTTCAGAGCCCGCGCATATCAGAAAAAGCATATAGTCCACAGATT
AACAAACTGAGAGGCCAACAAAGTCCCCTTTCTGGCGGAAGGGGGACGTTCAGTCCAAGG
ACCGGAGAACCAAAGCCATCCAATTTGGGCACGAGTCCTCGGACATCAACTCCTAACGAC
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400009267
PEP Infomation

pacid=37440163 transcript=PGSC0003DMT400013372 locus=PGSC0003DMG400005214 ID=PGSC0003DMT400013372.v4.03 annot-version=v4.03
Sequence

MEESFVPFRGIKNDLHGRLLCYKQDWTSGIKAGFRILAPTTYIFFASAIPVISFGEQLER
NTDGILTAVQTLASTAICGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKQRPDLGPGL
FLAWTGWVCVWTAILLFLLAILGACSIINRFTRLAGELFGMLIAMLFMQQAIKGLVDEFR
VPKRDNPHLTEFMPSWRFANGMFALVLSFGLLLTALKSRKARSWRYGTGWLRSLIADYGV
PLMVVVWTAVSYIPSESVPERIPRRLVSPNPWSPGAYENWTVIKDMLNVPVLYILGAFVP
ATMIAVLYYFDHSVASQLSQQKEFNLRKPSSFHYDLLLLGFLTLMCGLVGIPPSNGVIPQ
SPMHTKSLATLKHQLLRNRLVDTARKSMQKNSSLGQLYGNMQEAYQQMQTPLIYQEPSAR
SLKELKESTIQLASSMGHINAPVDETIFDVEKEIDDLLPVEVKEQRVSNLLQATMVGGCV
AAMPVLRMIPTSVLWGYFAYMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETV
PFKSIVAFTIFQTLYLLACFGITWVPIAGLLFPLLIMLLVPVRQYILPRFFKGAHLQDLD
AADYEESPAVPFNLPMEGEFGSRPSHAESGEILDEMITRSRGEVKRINSPKITSSTATPI
RDTKLLQSPRISEKAYSPQINKLRGQQSPLSGGRGTFSPRTGEPKPSNLGTSPRTSTPND
*

Transcript Sequence

Transcript ID

PGSC0003DMT400013372
Transcript Infomation

pacid=37440163 locus=PGSC0003DMG400005214 ID=PGSC0003DMT400013372.v4.03 annot-version=v4.03
Sequence

ATGGAAGAATCATTTGTGCCTTTTCGCGGAATCAAGAATGATCTTCATGGACGTCTATTG
TGCTACAAGCAAGATTGGACTAGTGGTATTAAGGCTGGCTTCAGGATCTTGGCACCAACT
ACATACATATTCTTTGCCTCAGCAATTCCAGTGATTTCATTTGGCGAGCAGCTGGAGAGA
AATACTGATGGAATTTTAACTGCTGTTCAAACATTAGCATCAACTGCAATTTGTGGAATT
ATACATTCCATTATTGGCGGTCAACCTTTGTTGATCTTAGGCGTTGCTGAACCAACTGTA
ATAATGTATACATTCATGTTCAACTTTGCTAAACAGAGACCTGATTTGGGTCCTGGTCTC
TTTCTAGCTTGGACTGGTTGGGTATGCGTCTGGACCGCGATTTTGCTTTTCTTGTTAGCA
ATTTTAGGAGCTTGCTCCATCATTAACAGGTTTACTCGTTTGGCTGGAGAACTATTTGGC
ATGCTTATTGCCATGCTCTTCATGCAGCAAGCTATTAAAGGCCTGGTAGATGAGTTTCGT
GTTCCAAAAAGAGACAATCCTCATTTAACCGAGTTCATGCCTTCGTGGAGATTTGCTAAT
GGAATGTTCGCGTTGGTTCTCTCATTTGGCCTACTGCTAACTGCTTTGAAAAGCCGAAAA
GCAAGATCATGGCGATATGGAACAGGTTGGCTTCGTAGTCTTATTGCAGACTACGGTGTG
CCACTTATGGTTGTAGTTTGGACAGCAGTTTCCTATATACCATCTGAAAGTGTTCCTGAA
AGAATTCCAAGACGCCTTGTCAGCCCAAACCCATGGTCACCCGGTGCTTATGAGAATTGG
ACTGTTATCAAGGACATGCTAAATGTACCAGTTCTCTACATACTCGGTGCTTTTGTTCCT
GCAACGATGATTGCTGTGCTTTACTATTTTGATCACAGTGTAGCATCCCAATTATCTCAG
CAGAAAGAGTTCAATCTCAGAAAGCCATCATCTTTCCATTATGACTTGCTTCTTTTGGGG
TTCTTGACACTAATGTGCGGCCTTGTTGGTATTCCTCCATCAAATGGTGTGATCCCACAA
TCCCCAATGCATACAAAAAGTCTGGCCACTCTTAAACACCAATTGCTTCGTAACAGACTA
GTCGACACAGCACGCAAAAGTATGCAGAAAAATTCAAGCTTGGGACAACTATATGGGAAT
ATGCAGGAAGCGTATCAACAGATGCAAACTCCTCTGATCTACCAGGAGCCATCAGCTAGA
AGTCTGAAGGAGTTAAAAGAATCAACAATTCAGTTAGCATCAAGCATGGGACACATCAAT
GCTCCTGTGGATGAAACCATTTTCGACGTTGAGAAGGAAATTGATGATTTGTTGCCTGTT
GAAGTGAAAGAACAGCGCGTTAGTAACTTGCTTCAAGCCACAATGGTTGGGGGATGTGTT
GCTGCTATGCCAGTTCTCAGAATGATTCCAACCTCAGTACTTTGGGGATATTTTGCGTAC
ATGGCCATTGAAAGTCTACCAGGCAATCAATTCTGGGAGAGAATATTACTACTATTCACT
GCACCAAGCAGACGATACAAAGTTCTAGAGGACTATCATGCTACTTTTGTAGAAACTGTT
CCTTTCAAGAGCATAGTAGCATTCACAATATTCCAAACACTCTACTTGCTTGCTTGCTTT
GGCATTACATGGGTTCCAATCGCCGGACTCCTTTTCCCTCTCTTGATCATGCTTTTGGTT
CCTGTGAGACAATACATATTGCCTAGGTTTTTCAAAGGGGCACACCTTCAAGATTTAGAT
GCAGCAGACTATGAAGAGTCACCCGCAGTTCCATTCAATCTTCCTATGGAGGGTGAATTT
GGTTCAAGACCTTCCCACGCAGAAAGCGGGGAGATTTTAGATGAAATGATCACTAGAAGC
AGGGGTGAGGTCAAGCGCATTAACAGTCCTAAGATCACAAGTTCAACAGCAACTCCAATA
AGAGATACCAAGCTCCTTCAGAGCCCGCGCATATCAGAAAAAGCATATAGTCCACAGATT
AACAAACTGAGAGGCCAACAAAGTCCCCTTTCTGGCGGAAGGGGGACGTTCAGTCCAAGG
ACCGGAGAACCAAAGCCATCCAATTTGGGCACGAGTCCTCGGACATCAACTCCTAACGAC
TAA