Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013355
CDS Infomation

pacid=37439875 polypeptide=PGSC0003DMP400009255 locus=PGSC0003DMG400005208 ID=PGSC0003DMT400013355.v4.03 annot-version=v4.03
Sequence

ATGGTGGGGAAAATCGTGGTTTCGTTAGTATCTTTGATACTTCTAGTTGGTGTGATAGTT
GGAGTTGTGGTTGTTGTGAACAAAAATGGTGATAGCAAAGAAGATGAAAGCACAAAAGTT
CAAATGAAGAAAGTTCATGAGTTTTGTCAAGCTACTGAATTTAAAGATCAATGTGCTAAG
TCACTTGAAAGTGTTGCTAAAAATGAGTCAGCTACAGTTAATGATTACCTTATGGCTGCA
TTCCAAACCACACTTGATGAAGTGAAAAAGGGTTTGGATGAGGCTGGAAAGACTAATGTG
GACAAAGAGGCTGATCCTTACAATCATATGGCTGTTGATGATTGCAAGCAGTTGCTGCAA
TCGGCTATCGAGGAGCTTGAAGGTGCACTCAGCTTGGTTGGTGAGACTGATGCTGAGTCA
ATCCATGAGTATACTCTTGATCTGTTGAATTGGATTGGAGGAGTTTACGCGTACCAAAGC
ATATGTCTTGATGCTATTGAAAAGCCAGAATATAAATCAGCAATTGAAAAAGGATTAGTG
AATGCTACTCAGCTTACCAATAACGCTATCAGCATTGTAGCAAAGATGTCTGATGTGTTG
AAATCATTCAACATTCAAATCCCGGAAGGTTTTCTGGATGGTAACAGCAACAGCTCTCCT
CATCGTCGTTTGTTGGATGCAAACAAGGTTGATCAGGATGGTTACCCAACATGGTTCCCT
GCTGCTGACCGTAAGCTATTGGAGAAAAGCTCCAAAGGAAAAGGAAAAGGAAAGGGAAAA
GGCGGTGCTGCTCCAGGAGGAGGACCACCACTTCCCCCAGTAGGATCAGGACCATTAACT
CCTCATGCAATTGTTGCCAAGGATGGAAGCGGCAAATTTAAGACTGTTCTCGAGGCTATC
AAGGCTTACCCAGTAAACCATCAAGGCAGATACATTGTCTACGTCAAGGCTGGTGTTTAC
GTCGAACAGGTCACTATTGACAAAAAGCAACCAAACGTTTTCATGTATGGTGATGGTGCA
GGGAAAACCATCATTTCCTGTGACAAAAATTATGGAAAAATGAGAATCACCACCATGAAT
ACTGCTACAGTCGGTGTTAACAGCGAGGGATTCATAGCTAAGGGAATTACATTCCGCAAC
ACTGCTGGTCCAGATGGTGAACAAGCTGTTGCACTTAGAATCTCTGGAGACAGGGGAGCA
GTATTCGACTGCAGCATAGAGGGAAACCAAGACACCTTGTACTATCAAACATTCCGTCAA
TTCTACCGCAACTGTGTAGTATCTGGTACCATTGATTTCATCTTTGGGATGGGATCAGCT
GTGATCCAGAACAGTGAGATCATATTGAGGAGGCCTAGAAGCACTAGCAAGAACACCATC
ACAGCTGATGGAAGGGACGTAGAAGGCCAAATCACTGGGGTAGTACTTCAGAACTGCAAA
ATTGTAGCAGAACAATCACTCTTTGCAGATAGGTTCAAATACGAACACTACTTAACGCGC
CCATGGAAGAAATTTTCCACCAATGTTTTCATGGAGAGTGAGATCGGTGACCTCATCAGG
CCTGAGGGATATCTGATTTGGGCGTCTGACAAGCCAAATTTTTTCGAACAGACATGTGAA
GTGTATGAATATGCAAACAGAGGACCTGGTGCTAACACTAACGGAAGGAGCAAACTCTTC
AAGAAGTTCAAGGTTCTTAGCCCACAGGAAGCTACTAAATACACCGTTGGCACTTTCCTT
CAAGCTAATGCATGGTTGCCTGGAACCAGTGCACCTTTCTACCTTGGTCTTGGGGGAAAA
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400009255
PEP Infomation

pacid=37439875 transcript=PGSC0003DMT400013355 locus=PGSC0003DMG400005208 ID=PGSC0003DMT400013355.v4.03 annot-version=v4.03
Sequence

MVGKIVVSLVSLILLVGVIVGVVVVVNKNGDSKEDESTKVQMKKVHEFCQATEFKDQCAK
SLESVAKNESATVNDYLMAAFQTTLDEVKKGLDEAGKTNVDKEADPYNHMAVDDCKQLLQ
SAIEELEGALSLVGETDAESIHEYTLDLLNWIGGVYAYQSICLDAIEKPEYKSAIEKGLV
NATQLTNNAISIVAKMSDVLKSFNIQIPEGFLDGNSNSSPHRRLLDANKVDQDGYPTWFP
AADRKLLEKSSKGKGKGKGKGGAAPGGGPPLPPVGSGPLTPHAIVAKDGSGKFKTVLEAI
KAYPVNHQGRYIVYVKAGVYVEQVTIDKKQPNVFMYGDGAGKTIISCDKNYGKMRITTMN
TATVGVNSEGFIAKGITFRNTAGPDGEQAVALRISGDRGAVFDCSIEGNQDTLYYQTFRQ
FYRNCVVSGTIDFIFGMGSAVIQNSEIILRRPRSTSKNTITADGRDVEGQITGVVLQNCK
IVAEQSLFADRFKYEHYLTRPWKKFSTNVFMESEIGDLIRPEGYLIWASDKPNFFEQTCE
VYEYANRGPGANTNGRSKLFKKFKVLSPQEATKYTVGTFLQANAWLPGTSAPFYLGLGGK
*

Transcript Sequence

Transcript ID

PGSC0003DMT400013355
Transcript Infomation

pacid=37439875 locus=PGSC0003DMG400005208 ID=PGSC0003DMT400013355.v4.03 annot-version=v4.03
Sequence

ATGGTGGGGAAAATCGTGGTTTCGTTAGTATCTTTGATACTTCTAGTTGGTGTGATAGTT
GGAGTTGTGGTTGTTGTGAACAAAAATGGTGATAGCAAAGAAGATGAAAGCACAAAAGTT
CAAATGAAGAAAGTTCATGAGTTTTGTCAAGCTACTGAATTTAAAGATCAATGTGCTAAG
TCACTTGAAAGTGTTGCTAAAAATGAGTCAGCTACAGTTAATGATTACCTTATGGCTGCA
TTCCAAACCACACTTGATGAAGTGAAAAAGGGTTTGGATGAGGCTGGAAAGACTAATGTG
GACAAAGAGGCTGATCCTTACAATCATATGGCTGTTGATGATTGCAAGCAGTTGCTGCAA
TCGGCTATCGAGGAGCTTGAAGGTGCACTCAGCTTGGTTGGTGAGACTGATGCTGAGTCA
ATCCATGAGTATACTCTTGATCTGTTGAATTGGATTGGAGGAGTTTACGCGTACCAAAGC
ATATGTCTTGATGCTATTGAAAAGCCAGAATATAAATCAGCAATTGAAAAAGGATTAGTG
AATGCTACTCAGCTTACCAATAACGCTATCAGCATTGTAGCAAAGATGTCTGATGTGTTG
AAATCATTCAACATTCAAATCCCGGAAGGTTTTCTGGATGGTAACAGCAACAGCTCTCCT
CATCGTCGTTTGTTGGATGCAAACAAGGTTGATCAGGATGGTTACCCAACATGGTTCCCT
GCTGCTGACCGTAAGCTATTGGAGAAAAGCTCCAAAGGAAAAGGAAAAGGAAAGGGAAAA
GGCGGTGCTGCTCCAGGAGGAGGACCACCACTTCCCCCAGTAGGATCAGGACCATTAACT
CCTCATGCAATTGTTGCCAAGGATGGAAGCGGCAAATTTAAGACTGTTCTCGAGGCTATC
AAGGCTTACCCAGTAAACCATCAAGGCAGATACATTGTCTACGTCAAGGCTGGTGTTTAC
GTCGAACAGGTCACTATTGACAAAAAGCAACCAAACGTTTTCATGTATGGTGATGGTGCA
GGGAAAACCATCATTTCCTGTGACAAAAATTATGGAAAAATGAGAATCACCACCATGAAT
ACTGCTACAGTCGGTGTTAACAGCGAGGGATTCATAGCTAAGGGAATTACATTCCGCAAC
ACTGCTGGTCCAGATGGTGAACAAGCTGTTGCACTTAGAATCTCTGGAGACAGGGGAGCA
GTATTCGACTGCAGCATAGAGGGAAACCAAGACACCTTGTACTATCAAACATTCCGTCAA
TTCTACCGCAACTGTGTAGTATCTGGTACCATTGATTTCATCTTTGGGATGGGATCAGCT
GTGATCCAGAACAGTGAGATCATATTGAGGAGGCCTAGAAGCACTAGCAAGAACACCATC
ACAGCTGATGGAAGGGACGTAGAAGGCCAAATCACTGGGGTAGTACTTCAGAACTGCAAA
ATTGTAGCAGAACAATCACTCTTTGCAGATAGGTTCAAATACGAACACTACTTAACGCGC
CCATGGAAGAAATTTTCCACCAATGTTTTCATGGAGAGTGAGATCGGTGACCTCATCAGG
CCTGAGGGATATCTGATTTGGGCGTCTGACAAGCCAAATTTTTTCGAACAGACATGTGAA
GTGTATGAATATGCAAACAGAGGACCTGGTGCTAACACTAACGGAAGGAGCAAACTCTTC
AAGAAGTTCAAGGTTCTTAGCCCACAGGAAGCTACTAAATACACCGTTGGCACTTTCCTT
CAAGCTAATGCATGGTTGCCTGGAACCAGTGCACCTTTCTACCTTGGTCTTGGGGGAAAA
TAG