Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013297
CDS Infomation

pacid=37450133 polypeptide=PGSC0003DMP400009215 locus=PGSC0003DMG400005189 ID=PGSC0003DMT400013297.v4.03 annot-version=v4.03
Sequence

ATGGCTGAGGAAACCAAGAAAATAGCTGAAGAAACGACCCCTGAAGTGGTGGTTTCTGAT
GTTACAGTGAGGGAGACACCTCAACCTGAGCCGGAAAATGTGCCGGAGTCACCGGAGAAA
GTTGCTCCGGTCACTGGAGAATCGAAGGTTGAGGATGAAAAGGAGAAGGAACTTGTTGCC
GAATCCAATTCGTTTAAGGAAGAAAGTAACAAGGTTGAAGAACTTCCTAATCCTGAACAA
AAAGCATTGGCTGAATTCAAACAGATGGTTCAAGAAGCTCTTAACAAGCATGAATTCACT
GCCCCTCCTCCTCCGCCGCCAGCAAAGGAAGAGGATGAGAAGAAAGCAGCCGTTTCCGCC
GATGCCCCTGCGGAGGCACCGGAGGCAGAGACAGCAGCGGCGGCGGCACCTGAGCCAGTG
ATAGAGGCAGAATCCGAGCCTGTGGCCGAGAAGAAAGTTGAAACAGAGGAATTGGAGAAA
ACAGAGGAGAAAGTAACTCCACCGGAAACTGAAGCAACTCCGGCACCGGCAGCAGAGACA
CCATCGGCGACAGAGAAGGTGGAGGCAGTCGAAGAAATCAAGGAAACAATTGTTGAAGTA
CCGGCTGCGGTTGCTGTGGTGGCCTCCACGGAGGAGCCACCGGCTGCAGAAGCAGAGGAA
CCAAAAACAGAGCAAACTCTTCCACCACCACCACCAGAAGAAGTAACCATATGGGGAATT
CCCCTTCTAGCAGATGAGAGAAGTGATGTAATCCTTCTCAAGTTTCTGCGAGCAAGAGAT
TTCAAGGTGAAAGAAGCTTTCGCCATGTTGAAAAGTGTTGTTGCATGGAGAAAAGAATTC
AAGATTGATGAACTCTTGGATGAGAAAGAATTAGGACAAGGACTTGAAAAGGTTGTTTAC
AATCATGGAGTAGACAAAGAAGGTCACCCTGTATGTTACAATGCATTTGGTGAGTTCCAA
GACAAAGAATTGTACCAAAACACTTTTGCTGATGACAAGGAGAAACTCACCAAATTCCTC
AGATGGAGAATTCAGTTCATGGAGAAGTCCATCAGGAATCTTGATTTTAGCCCTGATGGT
ATCAACACTTTTGTTCAGGTTCTTGATCTGAAGAATTCACCTGGACTCTTCTTTTACAAG
AAAGAACTTCGCCAGGCCACCAATCGTGCCCTTCTATTACTCCAGGATAACTACCCTGAA
TTTGTTGCCAAGCAGGTGTTCATCAATGTTCCATGGTGGTACCCAGCTTACTACAGGATG
ATTAATGCATCTTTCACTACAAGGACCAAGAGCAAGTTTGTTTTTGCTGGTCCTTCAAGA
TCTGCTGAGACCCTTTTCAAATACATAGCACCAGAACAAGTACCAGCACAATATGGTGGA
CTTAGCAAGGAGGGTGAACAGGAATTCATCACTGCTGAACCAGCTACTGAGGAAATCATT
AAGCCAGCTTCTAAACAAACCATTGAATTCCCAGTCACTGAGAAGTGCACATTGGTGTGG
GAAGCTAGAGTGACAGGTTGGGATGTATCATATGGAGCTGAATTTGTGCCTAGTGCTGAA
GGTGGATACACCATTCTCATAGAGAAATCAAGAAAAGTTGGGGCAAATGAATCAGTAATC
AGCACTAGCTACAAGGCAAGTGAAGCAGGCAAAGTGGTGATCACAATTGACAACCAAACT
TCTAAAAAGAAGAAACTTGTTTACAGGTCCAAGAACAAGCTCTCAGATTGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400009215
PEP Infomation

pacid=37450133 transcript=PGSC0003DMT400013297 locus=PGSC0003DMG400005189 ID=PGSC0003DMT400013297.v4.03 annot-version=v4.03
Sequence

MAEETKKIAEETTPEVVVSDVTVRETPQPEPENVPESPEKVAPVTGESKVEDEKEKELVA
ESNSFKEESNKVEELPNPEQKALAEFKQMVQEALNKHEFTAPPPPPPAKEEDEKKAAVSA
DAPAEAPEAETAAAAAPEPVIEAESEPVAEKKVETEELEKTEEKVTPPETEATPAPAAET
PSATEKVEAVEEIKETIVEVPAAVAVVASTEEPPAAEAEEPKTEQTLPPPPPEEVTIWGI
PLLADERSDVILLKFLRARDFKVKEAFAMLKSVVAWRKEFKIDELLDEKELGQGLEKVVY
NHGVDKEGHPVCYNAFGEFQDKELYQNTFADDKEKLTKFLRWRIQFMEKSIRNLDFSPDG
INTFVQVLDLKNSPGLFFYKKELRQATNRALLLLQDNYPEFVAKQVFINVPWWYPAYYRM
INASFTTRTKSKFVFAGPSRSAETLFKYIAPEQVPAQYGGLSKEGEQEFITAEPATEEII
KPASKQTIEFPVTEKCTLVWEARVTGWDVSYGAEFVPSAEGGYTILIEKSRKVGANESVI
STSYKASEAGKVVITIDNQTSKKKKLVYRSKNKLSDC*

Transcript Sequence

Transcript ID

PGSC0003DMT400013297
Transcript Infomation

pacid=37450133 locus=PGSC0003DMG400005189 ID=PGSC0003DMT400013297.v4.03 annot-version=v4.03
Sequence

ATGGCTGAGGAAACCAAGAAAATAGCTGAAGAAACGACCCCTGAAGTGGTGGTTTCTGAT
GTTACAGTGAGGGAGACACCTCAACCTGAGCCGGAAAATGTGCCGGAGTCACCGGAGAAA
GTTGCTCCGGTCACTGGAGAATCGAAGGTTGAGGATGAAAAGGAGAAGGAACTTGTTGCC
GAATCCAATTCGTTTAAGGAAGAAAGTAACAAGGTTGAAGAACTTCCTAATCCTGAACAA
AAAGCATTGGCTGAATTCAAACAGATGGTTCAAGAAGCTCTTAACAAGCATGAATTCACT
GCCCCTCCTCCTCCGCCGCCAGCAAAGGAAGAGGATGAGAAGAAAGCAGCCGTTTCCGCC
GATGCCCCTGCGGAGGCACCGGAGGCAGAGACAGCAGCGGCGGCGGCACCTGAGCCAGTG
ATAGAGGCAGAATCCGAGCCTGTGGCCGAGAAGAAAGTTGAAACAGAGGAATTGGAGAAA
ACAGAGGAGAAAGTAACTCCACCGGAAACTGAAGCAACTCCGGCACCGGCAGCAGAGACA
CCATCGGCGACAGAGAAGGTGGAGGCAGTCGAAGAAATCAAGGAAACAATTGTTGAAGTA
CCGGCTGCGGTTGCTGTGGTGGCCTCCACGGAGGAGCCACCGGCTGCAGAAGCAGAGGAA
CCAAAAACAGAGCAAACTCTTCCACCACCACCACCAGAAGAAGTAACCATATGGGGAATT
CCCCTTCTAGCAGATGAGAGAAGTGATGTAATCCTTCTCAAGTTTCTGCGAGCAAGAGAT
TTCAAGGTGAAAGAAGCTTTCGCCATGTTGAAAAGTGTTGTTGCATGGAGAAAAGAATTC
AAGATTGATGAACTCTTGGATGAGAAAGAATTAGGACAAGGACTTGAAAAGGTTGTTTAC
AATCATGGAGTAGACAAAGAAGGTCACCCTGTATGTTACAATGCATTTGGTGAGTTCCAA
GACAAAGAATTGTACCAAAACACTTTTGCTGATGACAAGGAGAAACTCACCAAATTCCTC
AGATGGAGAATTCAGTTCATGGAGAAGTCCATCAGGAATCTTGATTTTAGCCCTGATGGT
ATCAACACTTTTGTTCAGGTTCTTGATCTGAAGAATTCACCTGGACTCTTCTTTTACAAG
AAAGAACTTCGCCAGGCCACCAATCGTGCCCTTCTATTACTCCAGGATAACTACCCTGAA
TTTGTTGCCAAGCAGGTGTTCATCAATGTTCCATGGTGGTACCCAGCTTACTACAGGATG
ATTAATGCATCTTTCACTACAAGGACCAAGAGCAAGTTTGTTTTTGCTGGTCCTTCAAGA
TCTGCTGAGACCCTTTTCAAATACATAGCACCAGAACAAGTACCAGCACAATATGGTGGA
CTTAGCAAGGAGGGTGAACAGGAATTCATCACTGCTGAACCAGCTACTGAGGAAATCATT
AAGCCAGCTTCTAAACAAACCATTGAATTCCCAGTCACTGAGAAGTGCACATTGGTGTGG
GAAGCTAGAGTGACAGGTTGGGATGTATCATATGGAGCTGAATTTGTGCCTAGTGCTGAA
GGTGGATACACCATTCTCATAGAGAAATCAAGAAAAGTTGGGGCAAATGAATCAGTAATC
AGCACTAGCTACAAGGCAAGTGAAGCAGGCAAAGTGGTGATCACAATTGACAACCAAACT
TCTAAAAAGAAGAAACTTGTTTACAGGTCCAAGAACAAGCTCTCAGATTGTTGA