Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013293
CDS Infomation

pacid=37452218 polypeptide=PGSC0003DMP400009211 locus=PGSC0003DMG400005187 ID=PGSC0003DMT400013293.v4.03 annot-version=v4.03
Sequence

ATGGCATCACTTCAAGAAAGCTTGCAAAGGTTCAAGAAGCAGCAAGAGAAGTGCCAAGCT
ATTAGTAGTATGGCTGCCAGAGCAGGACCTTCCAAGGGAGCTCCTCCAAGACCAGCTAAT
GCAAAACCTCCTGCACCTGCAGTCAAATTTTCAAATGACACGGAAAGGCTCCAGCATATA
AATAGTATAAGGAAAGGGCCTGTTGGGGCTCAGATAAAACGTGTCATAGACTTGCTTCTG
GAGACAAGGCAAGCTTTCACACCAGAACAGATCAATGAAGCATGTTATGTTGATATAAAT
GGCAATAAAGCTGTGTTTGACAGTTTGAGGAATAACCTCAAAGTATATTATGATGGCAAT
CGCTTCTCTTATAAGTCGAAACATGCTCTGAAAAATAAAGATCAACTACTTATCTTGATA
CGAAAATTCCCTGAGGGTATTGCTGTAATCGACCTCAAGGATGCATACCCAACTGTCATG
GAGGACCTGCAGGCTCTCAAAGGTGCTGGTCAAATATGGCTGCTGTCAAATTTTGACTCC
CAAGAAGACATTGCCTTCCCAAATGATCCACGAGTACCTATTAAGGTTGATGATGATTTG
AAACAACTATTCAGAGGTATTGAATTACCACGTGACATGCTTGATATTGAAAGGGATCTC
CAGAAGAATGGGATGAAACCTGCTACAAACACTGCAAAGAGAAGGGCAATGGCACAAGTC
CATGGCATTGCCCCCAAGCCCAAAACCAAGAAGAAGAAGCATGAGATTAGCAAGAGGACT
AAGCTTACAAATGCTCATCTTCCAGAACTCTTCAAACTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400009211
PEP Infomation

pacid=37452218 transcript=PGSC0003DMT400013293 locus=PGSC0003DMG400005187 ID=PGSC0003DMT400013293.v4.03 annot-version=v4.03
Sequence

MASLQESLQRFKKQQEKCQAISSMAARAGPSKGAPPRPANAKPPAPAVKFSNDTERLQHI
NSIRKGPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINGNKAVFDSLRNNLKVYYDGN
RFSYKSKHALKNKDQLLILIRKFPEGIAVIDLKDAYPTVMEDLQALKGAGQIWLLSNFDS
QEDIAFPNDPRVPIKVDDDLKQLFRGIELPRDMLDIERDLQKNGMKPATNTAKRRAMAQV
HGIAPKPKTKKKKHEISKRTKLTNAHLPELFKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400013293
Transcript Infomation

pacid=37452218 locus=PGSC0003DMG400005187 ID=PGSC0003DMT400013293.v4.03 annot-version=v4.03
Sequence

ATGGCATCACTTCAAGAAAGCTTGCAAAGGTTCAAGAAGCAGCAAGAGAAGTGCCAAGCT
ATTAGTAGTATGGCTGCCAGAGCAGGACCTTCCAAGGGAGCTCCTCCAAGACCAGCTAAT
GCAAAACCTCCTGCACCTGCAGTCAAATTTTCAAATGACACGGAAAGGCTCCAGCATATA
AATAGTATAAGGAAAGGGCCTGTTGGGGCTCAGATAAAACGTGTCATAGACTTGCTTCTG
GAGACAAGGCAAGCTTTCACACCAGAACAGATCAATGAAGCATGTTATGTTGATATAAAT
GGCAATAAAGCTGTGTTTGACAGTTTGAGGAATAACCTCAAAGTATATTATGATGGCAAT
CGCTTCTCTTATAAGTCGAAACATGCTCTGAAAAATAAAGATCAACTACTTATCTTGATA
CGAAAATTCCCTGAGGGTATTGCTGTAATCGACCTCAAGGATGCATACCCAACTGTCATG
GAGGACCTGCAGGCTCTCAAAGGTGCTGGTCAAATATGGCTGCTGTCAAATTTTGACTCC
CAAGAAGACATTGCCTTCCCAAATGATCCACGAGTACCTATTAAGGTTGATGATGATTTG
AAACAACTATTCAGAGGTATTGAATTACCACGTGACATGCTTGATATTGAAAGGGATCTC
CAGAAGAATGGGATGAAACCTGCTACAAACACTGCAAAGAGAAGGGCAATGGCACAAGTC
CATGGCATTGCCCCCAAGCCCAAAACCAAGAAGAAGAAGCATGAGATTAGCAAGAGGACT
AAGCTTACAAATGCTCATCTTCCAGAACTCTTCAAACTTTAG