Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013292
CDS Infomation

pacid=37453365 polypeptide=PGSC0003DMP400009210 locus=PGSC0003DMG400005186 ID=PGSC0003DMT400013292.v4.03 annot-version=v4.03
Sequence

ATGTCTTCTACACTCGAAATCGAAGCTCGAGATGTCATTAAGATAGTTCTTCAATTCTGC
AAGGAGAACTCTCTGCATCAATCTTTCCAGACATTGCAAAATGAGTGCCAGGTTTCTCTT
AATACTGTGGATAGCCTTGAAACCTTTATAGCTGATATTAATAGTGGAAGATGGGATGCA
GTACTACCTCAAGTTGCACAACTTAAGCTTCCTAGAAAGATACTGGAGGATTTATATGAG
CAGATTGTCTTAGAAATGATTGAACTTCGAGAGATGGATACTGCACGAGCTATTTTAAGG
CAAACCAACGTGATGGGTGTCATGAAACAGGAGCAACCAGAAAGATATTTGCGGCTCGAG
CATCTACTAGTCCGGACTTACTTCGATCCTCATGAGGCTTATAATGACTCAACCAAGGAG
AAAAGGCGTGCCCAAATTTCCCAAGCACTTTCTGCTGAGGTTTCTGTTGTTCCACCATCA
CGCTTAATGGCTTTGATTGGTCAAGCCTTAAAATGGCAACAGCATCAAGGTTTACTTCCA
CCTGGAACACAGTTTGATCTATTCCGAGGAACAGCTGCTATGAAACAAGATGAAGAGGAT
ATGTATCCGACAACACTTGGTCACACTATTAAGTTTGGTAAGAAGAGTCATCCAGAATGT
TCTAGGTTCTCACCGGATGGACAATTTCTTGTCTCATGCTCAGTTGATGGATTTATTGAG
GTCTGGGATCACATAAGTGGAAAACTGAAGAAGGATCTTCAATATCAGGCTGATGAAACT
TTTATGATGCATGATGATGCTGTCCTTTGTGTTGATTTTAGCAGAGACTCGGAGATGCTT
GCGTCTGGGTCACAAGATGGAAAAATAAAGGTCTGGCGCATAAGGACTGGTCAGTGCTTG
CGTCGCCTTGAACGTGCACATTCTCAGGGTGTCACTAGTCTTGTCTTCTCTCGAGATGGA
ACTCAGATCTTAAGCACATCCTTTGACAGCACAGCGAGAATTCATGGCCTGAAGTCAGGT
AAATTGTTAAAAGAATTCCGCGGACATTCATCTTATGTGAATGATGCCATCTTTACCTTT
GATGGATCTCGAGTCATCACCGCATCTAGTGACGGCTCAGTGAAGGTCTGGGATGCCAAA
ACTACAGAGTGTTTGCAGACATTTAGACCACCTCCTCCTTTAAGGGGTGGCGATGCATCT
GTGAATTCTGTCCATCTTTTCCCTAAGAATACTGATCACATTATAGTGTGCAATAAGACA
TCATCTATTTATCTGATGACACTTCAAGGACAGGTCGTCAAAAGTTTCTCATCTGGTAAA
AGAGAAGGTGGAGACTTTGTGGCTGCATGTCTATCACCAAAAGGAGAATGGATATACTGT
GTAGGTGAAGACAGAAACTTGTACTGCTTTAGTTATCAATCAAACAAACTGGAGCATCTG
ATGAAGGTACATGAAAAGGATGTAATTGGTATCACTCACCATCCCCATATAAACCTTGTT
GCCACCTATGGAGAAGACTGCACCATGAAGCTATGGAAGCCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400009210
PEP Infomation

pacid=37453365 transcript=PGSC0003DMT400013292 locus=PGSC0003DMG400005186 ID=PGSC0003DMT400013292.v4.03 annot-version=v4.03
Sequence

MSSTLEIEARDVIKIVLQFCKENSLHQSFQTLQNECQVSLNTVDSLETFIADINSGRWDA
VLPQVAQLKLPRKILEDLYEQIVLEMIELREMDTARAILRQTNVMGVMKQEQPERYLRLE
HLLVRTYFDPHEAYNDSTKEKRRAQISQALSAEVSVVPPSRLMALIGQALKWQQHQGLLP
PGTQFDLFRGTAAMKQDEEDMYPTTLGHTIKFGKKSHPECSRFSPDGQFLVSCSVDGFIE
VWDHISGKLKKDLQYQADETFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCL
RRLERAHSQGVTSLVFSRDGTQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTF
DGSRVITASSDGSVKVWDAKTTECLQTFRPPPPLRGGDASVNSVHLFPKNTDHIIVCNKT
SSIYLMTLQGQVVKSFSSGKREGGDFVAACLSPKGEWIYCVGEDRNLYCFSYQSNKLEHL
MKVHEKDVIGITHHPHINLVATYGEDCTMKLWKP*

Transcript Sequence

Transcript ID

PGSC0003DMT400013292
Transcript Infomation

pacid=37453365 locus=PGSC0003DMG400005186 ID=PGSC0003DMT400013292.v4.03 annot-version=v4.03
Sequence

ATGTCTTCTACACTCGAAATCGAAGCTCGAGATGTCATTAAGATAGTTCTTCAATTCTGC
AAGGAGAACTCTCTGCATCAATCTTTCCAGACATTGCAAAATGAGTGCCAGGTTTCTCTT
AATACTGTGGATAGCCTTGAAACCTTTATAGCTGATATTAATAGTGGAAGATGGGATGCA
GTACTACCTCAAGTTGCACAACTTAAGCTTCCTAGAAAGATACTGGAGGATTTATATGAG
CAGATTGTCTTAGAAATGATTGAACTTCGAGAGATGGATACTGCACGAGCTATTTTAAGG
CAAACCAACGTGATGGGTGTCATGAAACAGGAGCAACCAGAAAGATATTTGCGGCTCGAG
CATCTACTAGTCCGGACTTACTTCGATCCTCATGAGGCTTATAATGACTCAACCAAGGAG
AAAAGGCGTGCCCAAATTTCCCAAGCACTTTCTGCTGAGGTTTCTGTTGTTCCACCATCA
CGCTTAATGGCTTTGATTGGTCAAGCCTTAAAATGGCAACAGCATCAAGGTTTACTTCCA
CCTGGAACACAGTTTGATCTATTCCGAGGAACAGCTGCTATGAAACAAGATGAAGAGGAT
ATGTATCCGACAACACTTGGTCACACTATTAAGTTTGGTAAGAAGAGTCATCCAGAATGT
TCTAGGTTCTCACCGGATGGACAATTTCTTGTCTCATGCTCAGTTGATGGATTTATTGAG
GTCTGGGATCACATAAGTGGAAAACTGAAGAAGGATCTTCAATATCAGGCTGATGAAACT
TTTATGATGCATGATGATGCTGTCCTTTGTGTTGATTTTAGCAGAGACTCGGAGATGCTT
GCGTCTGGGTCACAAGATGGAAAAATAAAGGTCTGGCGCATAAGGACTGGTCAGTGCTTG
CGTCGCCTTGAACGTGCACATTCTCAGGGTGTCACTAGTCTTGTCTTCTCTCGAGATGGA
ACTCAGATCTTAAGCACATCCTTTGACAGCACAGCGAGAATTCATGGCCTGAAGTCAGGT
AAATTGTTAAAAGAATTCCGCGGACATTCATCTTATGTGAATGATGCCATCTTTACCTTT
GATGGATCTCGAGTCATCACCGCATCTAGTGACGGCTCAGTGAAGGTCTGGGATGCCAAA
ACTACAGAGTGTTTGCAGACATTTAGACCACCTCCTCCTTTAAGGGGTGGCGATGCATCT
GTGAATTCTGTCCATCTTTTCCCTAAGAATACTGATCACATTATAGTGTGCAATAAGACA
TCATCTATTTATCTGATGACACTTCAAGGACAGGTCGTCAAAAGTTTCTCATCTGGTAAA
AGAGAAGGTGGAGACTTTGTGGCTGCATGTCTATCACCAAAAGGAGAATGGATATACTGT
GTAGGTGAAGACAGAAACTTGTACTGCTTTAGTTATCAATCAAACAAACTGGAGCATCTG
ATGAAGGTACATGAAAAGGATGTAATTGGTATCACTCACCATCCCCATATAAACCTTGTT
GCCACCTATGGAGAAGACTGCACCATGAAGCTATGGAAGCCTTAA