Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013227
CDS Infomation

pacid=37474991 polypeptide=PGSC0003DMP400009172 locus=PGSC0003DMG400005164 ID=PGSC0003DMT400013227.v4.03 annot-version=v4.03
Sequence

ATGTCAGTTAAGTCTCTCGTTCTTCTTCTCTCCGATGTTGAGCTCAGAGCTGCGATGGCT
TTGAGAAATCGTCAGCTATGGCAGCAAACGAAGATGATTTACAAAGTGACGATGGAGTAT
TATAGATTCTTCAGTTCGAAACCGAAAGTAGATTTGAGGAAACTAAGGCCAATGATTCTG
AAAAGGATTGAGGATCGGGCGAAAGATTATCCAGTAAAATCCATGGTTCCTGTTGCTGAA
GGCGTCTTTAAGGCTCGAACAATACTCTACCATGGCGTTTCCGCATTAATGCAACGTTTC
CCAACTTGGGCATGCAAATACTGTCCAGAAGTATATATTGGTGAGAATGGTCATTTGATA
CAAACTTGTCATGGTTACCGGCGGCGTGCTAAGAATCAGGCTCATGAGTGGATTAGAGGA
AGCTTGAATGATATTCTAGTGCCAGTAGAGGCATTTCATTTGCGAACTATGTTTCAGAAT
ATAATCAATCACCAAGAAAGATTTGATTATGATCGCATTCCAGCAGTTGTGGAACTGTGC
TTGCAGGCAGGGGCTATTCCAAGTGAAGAAATTGTATGCGGAAGTAGTTTGCCCTCAAGT
GTTCCTTTTCAAGCTGACTCTTTGTCTGACGATGATTTGATGTTGTTGGGAAGAGAAACC
TTGAAGGCATGGGAAGCACTTAGATCTGGAGTTCAGAGGCTATTGTTAGTATATCCAGCA
AAGGTCTGTGAACATTGCTCAGAAGTTCATATAGGACCTTCTGGACATAAGGCTCGTCTT
TGTGGTGTATTTAAGTTTGAAAGTTGGCGAGGAAGTCACTTTTGGAAGAAGGCAGAAGTG
GATCATTTGGTTCCTTCAAAAACAGTATGGTACCGCCGACCCCAGGATCCTCCATTACTT
CTGGATGACGGGCGGAACTATTATGGGCATGCTCCCGCTGTTGTTGATCTGTGTACTAAG
GCTGGAATTATTGCTCCTTCCAAGTACCATTGCATGATGAAACTTGAAGGTCTATCAGCC
CCGTCTCTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400009172
PEP Infomation

pacid=37474991 transcript=PGSC0003DMT400013227 locus=PGSC0003DMG400005164 ID=PGSC0003DMT400013227.v4.03 annot-version=v4.03
Sequence

MSVKSLVLLLSDVELRAAMALRNRQLWQQTKMIYKVTMEYYRFFSSKPKVDLRKLRPMIL
KRIEDRAKDYPVKSMVPVAEGVFKARTILYHGVSALMQRFPTWACKYCPEVYIGENGHLI
QTCHGYRRRAKNQAHEWIRGSLNDILVPVEAFHLRTMFQNIINHQERFDYDRIPAVVELC
LQAGAIPSEEIVCGSSLPSSVPFQADSLSDDDLMLLGRETLKAWEALRSGVQRLLLVYPA
KVCEHCSEVHIGPSGHKARLCGVFKFESWRGSHFWKKAEVDHLVPSKTVWYRRPQDPPLL
LDDGRNYYGHAPAVVDLCTKAGIIAPSKYHCMMKLEGLSAPSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400013227
Transcript Infomation

pacid=37474991 locus=PGSC0003DMG400005164 ID=PGSC0003DMT400013227.v4.03 annot-version=v4.03
Sequence

ATGTCAGTTAAGTCTCTCGTTCTTCTTCTCTCCGATGTTGAGCTCAGAGCTGCGATGGCT
TTGAGAAATCGTCAGCTATGGCAGCAAACGAAGATGATTTACAAAGTGACGATGGAGTAT
TATAGATTCTTCAGTTCGAAACCGAAAGTAGATTTGAGGAAACTAAGGCCAATGATTCTG
AAAAGGATTGAGGATCGGGCGAAAGATTATCCAGTAAAATCCATGGTTCCTGTTGCTGAA
GGCGTCTTTAAGGCTCGAACAATACTCTACCATGGCGTTTCCGCATTAATGCAACGTTTC
CCAACTTGGGCATGCAAATACTGTCCAGAAGTATATATTGGTGAGAATGGTCATTTGATA
CAAACTTGTCATGGTTACCGGCGGCGTGCTAAGAATCAGGCTCATGAGTGGATTAGAGGA
AGCTTGAATGATATTCTAGTGCCAGTAGAGGCATTTCATTTGCGAACTATGTTTCAGAAT
ATAATCAATCACCAAGAAAGATTTGATTATGATCGCATTCCAGCAGTTGTGGAACTGTGC
TTGCAGGCAGGGGCTATTCCAAGTGAAGAAATTGTATGCGGAAGTAGTTTGCCCTCAAGT
GTTCCTTTTCAAGCTGACTCTTTGTCTGACGATGATTTGATGTTGTTGGGAAGAGAAACC
TTGAAGGCATGGGAAGCACTTAGATCTGGAGTTCAGAGGCTATTGTTAGTATATCCAGCA
AAGGTCTGTGAACATTGCTCAGAAGTTCATATAGGACCTTCTGGACATAAGGCTCGTCTT
TGTGGTGTATTTAAGTTTGAAAGTTGGCGAGGAAGTCACTTTTGGAAGAAGGCAGAAGTG
GATCATTTGGTTCCTTCAAAAACAGTATGGTACCGCCGACCCCAGGATCCTCCATTACTT
CTGGATGACGGGCGGAACTATTATGGGCATGCTCCCGCTGTTGTTGATCTGTGTACTAAG
GCTGGAATTATTGCTCCTTCCAAGTACCATTGCATGATGAAACTTGAAGGTCTATCAGCC
CCGTCTCTGTGA