Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013221
CDS Infomation

pacid=37475443 polypeptide=PGSC0003DMP400009167 locus=PGSC0003DMG400005162 ID=PGSC0003DMT400013221.v4.03 annot-version=v4.03
Sequence

ATGGAGCAAAGAAGTTGCAACAACTTGCACTTTATCCAGGTTAGGAGGAGAGGTTTGACA
GTAGAAGTCCCTAATGTAGATTCTCATGGAAAGCCAGCTTTAATGTTCAAGAAGTTAAAA
GACATCTATGATACTGAAAATATTAAGTGTGAAAGCGAATGTCTGCAGGTGGTAGACAGA
ACATTACAAGCAGTAGAACCTGAAGATAACATATTTGGTGGCTGTGCTAATCATGAAGTG
AATATTCAGTCAGATGATTGTGATTTTGGAGAAATAACACTGAAACAACTGAAGAATAAA
TGCAAATCCAAGAAAAGGAAACTTGCTACTCCAAGTTCTAGTATGACCTGTCTGAAGCAG
CCTAACGGATGTTATCTCCCAGACGAAGATGATGATCTAAAAGTACCCCTTAGTCATTTG
AAATCGGGGATTTTCAAAAAAGCAAATGGTAAAAGAAGGTGCACCAACAGGAATCTCTTT
GCATCTCCAAAAGAGCCTGTATCAGTTAAACTTGAAGAGGTTTTTGAGCCTGAAATTTCT
CAGCAGCTCAGAAGTGTTTTGCCTGAAGTGGCAGAACCCATAGCTGACACTTCTGAATCT
GAGTTCTCAGTGTGTCAAAGCTCAGATTCCTCCAATTGCTCCTCTAATATCCAGATGGTT
AGCAAACTGGAACCTGTTACAATTACATGCAGTGAATTTCCAAATGATGCTGACTCTGAG
GAAAACAAACCAGTTTTGTTTGCTGAAGAACAGCAGCTTTGTACTCTTAACCAGATTTCC
AGTGATAACTCGGAACATGTGGAGTCTAAATATGTTTTCTCAGCTAGTGAAGTGCCTGCA
GAGGTAAATAATCAGGAGGACGGATGTAATGGAGAGAACAGTCAAAAAGAGTTGTTTGCT
CCAGCAAGGTCTATGGAAACAGTAGCAGCAGCAAATGATCAGAGTCTAGACATGTATGAC
TGCCTGATGAATTGTTCTGATACAGTCGAGATTTCTGATCAGAAACCCAATATTGTTGTG
TTTCATGTTCCTGACGCAACGGTACCTAATAGCACTATCACTGCCAGTCTTCATTGTGCA
GATGATGTTTGCATGTTTGGAGATAGAGATAAGGAAGTTTTGCTCTCAGATCAGAATATT
AGTTCAGTCGATGGCCCTGTTGACAATTGCATCTCATCGTGGAATTTTCAAACTTGCTCA
GGCAGTGACAATTGTTTGCCATCCTTGGACAAAATTGATGACAAGGAGCAGCGAACAGAT
TCTTGCTTTACTGATGCAGCAACTAGTTTGATTTCAGGAAATTGTTTGGGTGATGAAAAT
CGGCCACTGAAATATTCAAGTATTTCTGAAGAAAAAAATATGACGTTAAGCAGTCCACCT
CCGGATGTTGTTGATCAGATCTCAACACCAGAGCTGTCACCGCCTCCTGAGAGACTTCTT
TCGACACGAAAGGCTATTTCTCCATCCTCTCAAGAGCGACTTTGTTTGGCTATGAACTCC
ATAGACTTAATTGATGACCTGGAGAACTACAAATGTAAAGAAAAACTCACTTTTGCGGGT
CATGAGGATTCTGAAAGATCATGCCTAGCTGATGCTAGCACAAGTAAAGATTCTGAACGA
TCTCCACGGCCTAATCAGGCTAAAGTTTTTATAGGCCCCAAGCAGATCTCTAGGAGATTG
AAGATTGGAAAACGAAGTTCCCCTCCAAAAGGCAATCTAGTAAAACGAAGTAGTCCTTTG
AAGGGCAATCTAGAAGGTCCTCGTCTATCTCGTTCTTTACCTCAGCTTAGCACTGGGTGC
ACCTCAATTAAACGTTGTTCAGAAAGTGCTATAGCATTTTCACAGCGGCAGATGCATGAT
ATTGAATCTCTAGCATCGAAGCTTATGAATGAATTGAAGTCCATGAAGGATATGGTAGAA
GACAAATTACTCTTTGAAGCATATCGAACCAGTTCTTTGAAAAATGATGCTGATGAGGTG
AAGAATGCCATAAAAGGTGCTACGAAAGTTGAAGAGACAACACGAAAGTGGTTGTCCATG
ATGACTAGGGACTGCACCAGATTCTGTAAAATCATGAAATTGACTCAAAATGGTGCGACT
GATTCCAAGAACTCAGTCCATAGAGAGGGGAGGAAAATTTCTTTTGCTGATGAAGCTGGT
GGTATGCTCTGTCATTTCAACTATTTTGAGGATACCGATCCAACGTTGGAATCTGATAGT
GTACAAGAAGAAGACATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400009167
PEP Infomation

pacid=37475443 transcript=PGSC0003DMT400013221 locus=PGSC0003DMG400005162 ID=PGSC0003DMT400013221.v4.03 annot-version=v4.03
Sequence

MEQRSCNNLHFIQVRRRGLTVEVPNVDSHGKPALMFKKLKDIYDTENIKCESECLQVVDR
TLQAVEPEDNIFGGCANHEVNIQSDDCDFGEITLKQLKNKCKSKKRKLATPSSSMTCLKQ
PNGCYLPDEDDDLKVPLSHLKSGIFKKANGKRRCTNRNLFASPKEPVSVKLEEVFEPEIS
QQLRSVLPEVAEPIADTSESEFSVCQSSDSSNCSSNIQMVSKLEPVTITCSEFPNDADSE
ENKPVLFAEEQQLCTLNQISSDNSEHVESKYVFSASEVPAEVNNQEDGCNGENSQKELFA
PARSMETVAAANDQSLDMYDCLMNCSDTVEISDQKPNIVVFHVPDATVPNSTITASLHCA
DDVCMFGDRDKEVLLSDQNISSVDGPVDNCISSWNFQTCSGSDNCLPSLDKIDDKEQRTD
SCFTDAATSLISGNCLGDENRPLKYSSISEEKNMTLSSPPPDVVDQISTPELSPPPERLL
STRKAISPSSQERLCLAMNSIDLIDDLENYKCKEKLTFAGHEDSERSCLADASTSKDSER
SPRPNQAKVFIGPKQISRRLKIGKRSSPPKGNLVKRSSPLKGNLEGPRLSRSLPQLSTGC
TSIKRCSESAIAFSQRQMHDIESLASKLMNELKSMKDMVEDKLLFEAYRTSSLKNDADEV
KNAIKGATKVEETTRKWLSMMTRDCTRFCKIMKLTQNGATDSKNSVHREGRKISFADEAG
GMLCHFNYFEDTDPTLESDSVQEEDI*

Transcript Sequence

Transcript ID

PGSC0003DMT400013221
Transcript Infomation

pacid=37475443 locus=PGSC0003DMG400005162 ID=PGSC0003DMT400013221.v4.03 annot-version=v4.03
Sequence

ATGGAGCAAAGAAGTTGCAACAACTTGCACTTTATCCAGGTTAGGAGGAGAGGTTTGACA
GTAGAAGTCCCTAATGTAGATTCTCATGGAAAGCCAGCTTTAATGTTCAAGAAGTTAAAA
GACATCTATGATACTGAAAATATTAAGTGTGAAAGCGAATGTCTGCAGGTGGTAGACAGA
ACATTACAAGCAGTAGAACCTGAAGATAACATATTTGGTGGCTGTGCTAATCATGAAGTG
AATATTCAGTCAGATGATTGTGATTTTGGAGAAATAACACTGAAACAACTGAAGAATAAA
TGCAAATCCAAGAAAAGGAAACTTGCTACTCCAAGTTCTAGTATGACCTGTCTGAAGCAG
CCTAACGGATGTTATCTCCCAGACGAAGATGATGATCTAAAAGTACCCCTTAGTCATTTG
AAATCGGGGATTTTCAAAAAAGCAAATGGTAAAAGAAGGTGCACCAACAGGAATCTCTTT
GCATCTCCAAAAGAGCCTGTATCAGTTAAACTTGAAGAGGTTTTTGAGCCTGAAATTTCT
CAGCAGCTCAGAAGTGTTTTGCCTGAAGTGGCAGAACCCATAGCTGACACTTCTGAATCT
GAGTTCTCAGTGTGTCAAAGCTCAGATTCCTCCAATTGCTCCTCTAATATCCAGATGGTT
AGCAAACTGGAACCTGTTACAATTACATGCAGTGAATTTCCAAATGATGCTGACTCTGAG
GAAAACAAACCAGTTTTGTTTGCTGAAGAACAGCAGCTTTGTACTCTTAACCAGATTTCC
AGTGATAACTCGGAACATGTGGAGTCTAAATATGTTTTCTCAGCTAGTGAAGTGCCTGCA
GAGGTAAATAATCAGGAGGACGGATGTAATGGAGAGAACAGTCAAAAAGAGTTGTTTGCT
CCAGCAAGGTCTATGGAAACAGTAGCAGCAGCAAATGATCAGAGTCTAGACATGTATGAC
TGCCTGATGAATTGTTCTGATACAGTCGAGATTTCTGATCAGAAACCCAATATTGTTGTG
TTTCATGTTCCTGACGCAACGGTACCTAATAGCACTATCACTGCCAGTCTTCATTGTGCA
GATGATGTTTGCATGTTTGGAGATAGAGATAAGGAAGTTTTGCTCTCAGATCAGAATATT
AGTTCAGTCGATGGCCCTGTTGACAATTGCATCTCATCGTGGAATTTTCAAACTTGCTCA
GGCAGTGACAATTGTTTGCCATCCTTGGACAAAATTGATGACAAGGAGCAGCGAACAGAT
TCTTGCTTTACTGATGCAGCAACTAGTTTGATTTCAGGAAATTGTTTGGGTGATGAAAAT
CGGCCACTGAAATATTCAAGTATTTCTGAAGAAAAAAATATGACGTTAAGCAGTCCACCT
CCGGATGTTGTTGATCAGATCTCAACACCAGAGCTGTCACCGCCTCCTGAGAGACTTCTT
TCGACACGAAAGGCTATTTCTCCATCCTCTCAAGAGCGACTTTGTTTGGCTATGAACTCC
ATAGACTTAATTGATGACCTGGAGAACTACAAATGTAAAGAAAAACTCACTTTTGCGGGT
CATGAGGATTCTGAAAGATCATGCCTAGCTGATGCTAGCACAAGTAAAGATTCTGAACGA
TCTCCACGGCCTAATCAGGCTAAAGTTTTTATAGGCCCCAAGCAGATCTCTAGGAGATTG
AAGATTGGAAAACGAAGTTCCCCTCCAAAAGGCAATCTAGTAAAACGAAGTAGTCCTTTG
AAGGGCAATCTAGAAGGTCCTCGTCTATCTCGTTCTTTACCTCAGCTTAGCACTGGGTGC
ACCTCAATTAAACGTTGTTCAGAAAGTGCTATAGCATTTTCACAGCGGCAGATGCATGAT
ATTGAATCTCTAGCATCGAAGCTTATGAATGAATTGAAGTCCATGAAGGATATGGTAGAA
GACAAATTACTCTTTGAAGCATATCGAACCAGTTCTTTGAAAAATGATGCTGATGAGGTG
AAGAATGCCATAAAAGGTGCTACGAAAGTTGAAGAGACAACACGAAAGTGGTTGTCCATG
ATGACTAGGGACTGCACCAGATTCTGTAAAATCATGAAATTGACTCAAAATGGTGCGACT
GATTCCAAGAACTCAGTCCATAGAGAGGGGAGGAAAATTTCTTTTGCTGATGAAGCTGGT
GGTATGCTCTGTCATTTCAACTATTTTGAGGATACCGATCCAACGTTGGAATCTGATAGT
GTACAAGAAGAAGACATATGA