Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013177
CDS Infomation

pacid=37473091 polypeptide=PGSC0003DMP400009137 locus=PGSC0003DMG400005148 ID=PGSC0003DMT400013177.v4.03 annot-version=v4.03
Sequence

ATGTATCTCACAGTTCTTTCGATTTTGCTATTACTACCTGTGATCTTCATTTTCAAGTTC
ATATACTCAGTGATTTACCTTCCATGGAAGTTCGAAAAACACTTCAGGAAGCAAGGAATC
AGAGGCCCCGGCTACCGTCTGATCTACGGAAACACAGAGGAAATCAAACGGCAGATTAGT
GAAGCTGAATCGAAATCAATTCCGTTCAATCACAACGTGCTGCACCGAATTGCTCCTCAG
TACTACAACTGGTCGGCCATTTACGGGAAGACTTTTTTGTGGTGGTTCGGGTCGAAGCCC
CGGTTGGCTATTTCTGACCCGGATATGATTAAAGGGCTTTTCATGAATAAAGCAGTGGAT
AAAGTTGGATTTGATCCACAAACTAAGCAGCTGTTTGGACAAGGACTTGTTGGTTTGCGT
GGTGAACAATGGGCTTTGCATAGGAGGATTGCAAACCAGGCTTTTAACATGGAGATTGTT
AAGGCTTGGGTACCGGATATTGTGACTAGTGTTATCAAGGCATTGAAGAAATGGGAAAAA
GAAAATGAAGAGAAGGAAGAATTTGAAATAGATGTCTTCAAAGAATTGAATGATCTCTCA
GCTGAGGTTATATCTAGAACAGCTTTTGGGAGTAGCTTTGAAGAGGGGAAGCGCATATTT
GTGTTGCAAGAGCAACAAATATTTCTTACTTTGCAGGCAATACGAAGCATCTACCTTCCT
GGATTTAGGTATTTGCCCACGAAAAATAACATGATGAGACGGAGACTAGAGAAAGAAACT
CGAGAGTCAGTTAGGAAGCTGATTGAGAGTAGTAAAGGGAGAGAACATTCTAAAAGTCTT
CTTAGTTTGCTAATCTCTGCTAGTGAAGAAGAACACGGATTTGGGATGGAAGAAGTCATA
AATGAATGCAAGACATTTTACTTTGCTGGGAAGGAAACTACTTCTGTCTTATTAACTTGG
ACACTTCTTCTTCTAGCATTGCATCAAGAGTGGCAAGATAAAGCTCGAGAAGAAGTTTTC
CGAGTTTGTAAGGGTAACAACCTTCCAAGTGCAGAGAATCTGAATGATTTCAAGATTGTG
ACAATGATACTTAATGAGACACTGAGACTCTACCCACCGATAGTCGCATTGACAAGAGGA
ACTTCTAAAGATATCAAGTTGGGAGACCTTGAAATTCCTGCAAATACTCAATTTTATGTG
TCAGTAGCTGCTGTGCACCATGACACCGAGATATGGGGGAAAGATGCACTGGAATTCAAC
CCTCAGAGATTTGCCGAGTCTCGTAAGCATTTGGCTTCATTTTTCCCTTTTGCATTAGGT
CCAAGAGTCTGTGTTGGGCAAAACTTAGCCATGGTTGAAGCCAAAATCATCCTGGCAATG
ATAGTTAAGAATTTCTCTCTTGCATTGTCACCTTCATATGTTCATGCTCCAACTACGCGC
CTTACTTTACAGCCCCAGTATGGTGCTCCTATCCTCTTTAGGAAGATTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400009137
PEP Infomation

pacid=37473091 transcript=PGSC0003DMT400013177 locus=PGSC0003DMG400005148 ID=PGSC0003DMT400013177.v4.03 annot-version=v4.03
Sequence

MYLTVLSILLLLPVIFIFKFIYSVIYLPWKFEKHFRKQGIRGPGYRLIYGNTEEIKRQIS
EAESKSIPFNHNVLHRIAPQYYNWSAIYGKTFLWWFGSKPRLAISDPDMIKGLFMNKAVD
KVGFDPQTKQLFGQGLVGLRGEQWALHRRIANQAFNMEIVKAWVPDIVTSVIKALKKWEK
ENEEKEEFEIDVFKELNDLSAEVISRTAFGSSFEEGKRIFVLQEQQIFLTLQAIRSIYLP
GFRYLPTKNNMMRRRLEKETRESVRKLIESSKGREHSKSLLSLLISASEEEHGFGMEEVI
NECKTFYFAGKETTSVLLTWTLLLLALHQEWQDKAREEVFRVCKGNNLPSAENLNDFKIV
TMILNETLRLYPPIVALTRGTSKDIKLGDLEIPANTQFYVSVAAVHHDTEIWGKDALEFN
PQRFAESRKHLASFFPFALGPRVCVGQNLAMVEAKIILAMIVKNFSLALSPSYVHAPTTR
LTLQPQYGAPILFRKI*

Transcript Sequence

Transcript ID

PGSC0003DMT400013177
Transcript Infomation

pacid=37473091 locus=PGSC0003DMG400005148 ID=PGSC0003DMT400013177.v4.03 annot-version=v4.03
Sequence

ATGTATCTCACAGTTCTTTCGATTTTGCTATTACTACCTGTGATCTTCATTTTCAAGTTC
ATATACTCAGTGATTTACCTTCCATGGAAGTTCGAAAAACACTTCAGGAAGCAAGGAATC
AGAGGCCCCGGCTACCGTCTGATCTACGGAAACACAGAGGAAATCAAACGGCAGATTAGT
GAAGCTGAATCGAAATCAATTCCGTTCAATCACAACGTGCTGCACCGAATTGCTCCTCAG
TACTACAACTGGTCGGCCATTTACGGGAAGACTTTTTTGTGGTGGTTCGGGTCGAAGCCC
CGGTTGGCTATTTCTGACCCGGATATGATTAAAGGGCTTTTCATGAATAAAGCAGTGGAT
AAAGTTGGATTTGATCCACAAACTAAGCAGCTGTTTGGACAAGGACTTGTTGGTTTGCGT
GGTGAACAATGGGCTTTGCATAGGAGGATTGCAAACCAGGCTTTTAACATGGAGATTGTT
AAGGCTTGGGTACCGGATATTGTGACTAGTGTTATCAAGGCATTGAAGAAATGGGAAAAA
GAAAATGAAGAGAAGGAAGAATTTGAAATAGATGTCTTCAAAGAATTGAATGATCTCTCA
GCTGAGGTTATATCTAGAACAGCTTTTGGGAGTAGCTTTGAAGAGGGGAAGCGCATATTT
GTGTTGCAAGAGCAACAAATATTTCTTACTTTGCAGGCAATACGAAGCATCTACCTTCCT
GGATTTAGGTATTTGCCCACGAAAAATAACATGATGAGACGGAGACTAGAGAAAGAAACT
CGAGAGTCAGTTAGGAAGCTGATTGAGAGTAGTAAAGGGAGAGAACATTCTAAAAGTCTT
CTTAGTTTGCTAATCTCTGCTAGTGAAGAAGAACACGGATTTGGGATGGAAGAAGTCATA
AATGAATGCAAGACATTTTACTTTGCTGGGAAGGAAACTACTTCTGTCTTATTAACTTGG
ACACTTCTTCTTCTAGCATTGCATCAAGAGTGGCAAGATAAAGCTCGAGAAGAAGTTTTC
CGAGTTTGTAAGGGTAACAACCTTCCAAGTGCAGAGAATCTGAATGATTTCAAGATTGTG
ACAATGATACTTAATGAGACACTGAGACTCTACCCACCGATAGTCGCATTGACAAGAGGA
ACTTCTAAAGATATCAAGTTGGGAGACCTTGAAATTCCTGCAAATACTCAATTTTATGTG
TCAGTAGCTGCTGTGCACCATGACACCGAGATATGGGGGAAAGATGCACTGGAATTCAAC
CCTCAGAGATTTGCCGAGTCTCGTAAGCATTTGGCTTCATTTTTCCCTTTTGCATTAGGT
CCAAGAGTCTGTGTTGGGCAAAACTTAGCCATGGTTGAAGCCAAAATCATCCTGGCAATG
ATAGTTAAGAATTTCTCTCTTGCATTGTCACCTTCATATGTTCATGCTCCAACTACGCGC
CTTACTTTACAGCCCCAGTATGGTGCTCCTATCCTCTTTAGGAAGATTTAA