Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013174
CDS Infomation

pacid=37474591 polypeptide=PGSC0003DMP400009135 locus=PGSC0003DMG400005147 ID=PGSC0003DMT400013174.v4.03 annot-version=v4.03
Sequence

ATGGCAGATATTGAAAAATTAGCTGGTTCTGGTTCATTAGAAGAATCGATTACACAGCAA
AATTTTCCAGTAAAGAGGAGAAGGAATCTTCCTGGAAATCCTGATCCAGAAGCAGAAGTG
ATAGCTTTATCACCAAAAACTCTAATGGCGACAAACCGATTTGTGTGTGAGATTTGTAAC
AAAGGTTTTCAAAGAGATCAAAATTTACAGCTTCATCGGAGAGGTCACAACTTGCCATGG
AAACTCCGGCAACGAACGAGCAATGAGGTGAAAAAACGTGTTTACGTTTGTCCAGAATCT
TCATGCGTTCATCATGATCCTTCTAGAGCTTTAGGCGATCTCACTGGAATTAAGAAACAT
TTCTGCAGAAAACATGGTGAGAAGAAGTTTAAATGTGAACGTTGCACCAAAAAATACGCT
GTTCATTCCGATTGGAAAGCACATATGAAAACTTGTGGTACTAGAGAGTATCGCTGTGAT
TGTGGAACTTTATTTTCCAGGAGGGATAGCTTCATAACTCATAGAGCATTTTGTGATGCA
TTGGCTCAAGAAAGTGCAAGATCTCATCAACCATTAATGGAGGATACAAATGCTGAAGGA
GATTTGAAGGTTGATGAAGCTATTAACAAAACGGTGTCGTCTTCATCTAGTCCACCACCA
CAACCTTTAACTCCATCAACTGGCGTTCTCTCTCCAGTTCTGTCCATTCACAGTTCAGAA
TTGCCTGTAGAAAATCAAAATCAAGGTGGAGTACAATTGCAACAAGCACAAGGTACAACA
ACACATGTTTCTACCACCCCTGTCATCACAATTTCCACTGCTGCTGCTAGTGGTCCTAGT
AGTAGCAAGGTGTTTGCTAGTGTGTTTCCATCGTCGTCATCAGCTCAGCATGTAAACTCG
TCTTACTCAGATATTCTACGTGCTATTGAGACCGAGCAAGTGATGGCTGTAGAGCCGATG
TCACTCTCATTGTCATCTTCTCTTTACTTGTCTAATAATGGACCAAGTTTATTCCAAGAA
CACACTGGTGGCCACAGCCACGGCCATGGCCAGCATTATGGTTCAGCAACAATGCAGCCA
GCATTATCTGCAACTGCATTACTTCAAAAAGCAGCCCAAATGGGGTCTACAACCTCAAAC
AACTCGTTTCTCCGTGGCCTTGGATTGGCAATGTCATCAAGTACTTCTACGCCGGAGGAG
AATTTACTAGCAAGGAGGACTAATTCTCTCGGCCATGTGAAGCTGGAGAGCAATATTAAT
GCAGAGGTACCCGGGCTCGGGATACAGCTTCATGGTCATTCAGGATTTACCGACTTTAGG
ATGGGTCCATCCATATCTCATCAGACATCTATGATGTTCGGAAGCAAGCCTCCGACTCTT
GATTTTCTTGGTTTAGGAAATGGTGCAAGTGTAACTCCATCGAACGGATTTTCAGCATTT
TTAAGCTCAATGGAAGATGGATTTGGTGTTGTAGCTGAGCCTTGGGATGACCCTTCTGAT
AGAAAACCTGCTATGCTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400009135
PEP Infomation

pacid=37474591 transcript=PGSC0003DMT400013174 locus=PGSC0003DMG400005147 ID=PGSC0003DMT400013174.v4.03 annot-version=v4.03
Sequence

MADIEKLAGSGSLEESITQQNFPVKRRRNLPGNPDPEAEVIALSPKTLMATNRFVCEICN
KGFQRDQNLQLHRRGHNLPWKLRQRTSNEVKKRVYVCPESSCVHHDPSRALGDLTGIKKH
FCRKHGEKKFKCERCTKKYAVHSDWKAHMKTCGTREYRCDCGTLFSRRDSFITHRAFCDA
LAQESARSHQPLMEDTNAEGDLKVDEAINKTVSSSSSPPPQPLTPSTGVLSPVLSIHSSE
LPVENQNQGGVQLQQAQGTTTHVSTTPVITISTAAASGPSSSKVFASVFPSSSSAQHVNS
SYSDILRAIETEQVMAVEPMSLSLSSSLYLSNNGPSLFQEHTGGHSHGHGQHYGSATMQP
ALSATALLQKAAQMGSTTSNNSFLRGLGLAMSSSTSTPEENLLARRTNSLGHVKLESNIN
AEVPGLGIQLHGHSGFTDFRMGPSISHQTSMMFGSKPPTLDFLGLGNGASVTPSNGFSAF
LSSMEDGFGVVAEPWDDPSDRKPAML*

Transcript Sequence

Transcript ID

PGSC0003DMT400013174
Transcript Infomation

pacid=37474591 locus=PGSC0003DMG400005147 ID=PGSC0003DMT400013174.v4.03 annot-version=v4.03
Sequence

ATGGCAGATATTGAAAAATTAGCTGGTTCTGGTTCATTAGAAGAATCGATTACACAGCAA
AATTTTCCAGTAAAGAGGAGAAGGAATCTTCCTGGAAATCCTGATCCAGAAGCAGAAGTG
ATAGCTTTATCACCAAAAACTCTAATGGCGACAAACCGATTTGTGTGTGAGATTTGTAAC
AAAGGTTTTCAAAGAGATCAAAATTTACAGCTTCATCGGAGAGGTCACAACTTGCCATGG
AAACTCCGGCAACGAACGAGCAATGAGGTGAAAAAACGTGTTTACGTTTGTCCAGAATCT
TCATGCGTTCATCATGATCCTTCTAGAGCTTTAGGCGATCTCACTGGAATTAAGAAACAT
TTCTGCAGAAAACATGGTGAGAAGAAGTTTAAATGTGAACGTTGCACCAAAAAATACGCT
GTTCATTCCGATTGGAAAGCACATATGAAAACTTGTGGTACTAGAGAGTATCGCTGTGAT
TGTGGAACTTTATTTTCCAGGAGGGATAGCTTCATAACTCATAGAGCATTTTGTGATGCA
TTGGCTCAAGAAAGTGCAAGATCTCATCAACCATTAATGGAGGATACAAATGCTGAAGGA
GATTTGAAGGTTGATGAAGCTATTAACAAAACGGTGTCGTCTTCATCTAGTCCACCACCA
CAACCTTTAACTCCATCAACTGGCGTTCTCTCTCCAGTTCTGTCCATTCACAGTTCAGAA
TTGCCTGTAGAAAATCAAAATCAAGGTGGAGTACAATTGCAACAAGCACAAGGTACAACA
ACACATGTTTCTACCACCCCTGTCATCACAATTTCCACTGCTGCTGCTAGTGGTCCTAGT
AGTAGCAAGGTGTTTGCTAGTGTGTTTCCATCGTCGTCATCAGCTCAGCATGTAAACTCG
TCTTACTCAGATATTCTACGTGCTATTGAGACCGAGCAAGTGATGGCTGTAGAGCCGATG
TCACTCTCATTGTCATCTTCTCTTTACTTGTCTAATAATGGACCAAGTTTATTCCAAGAA
CACACTGGTGGCCACAGCCACGGCCATGGCCAGCATTATGGTTCAGCAACAATGCAGCCA
GCATTATCTGCAACTGCATTACTTCAAAAAGCAGCCCAAATGGGGTCTACAACCTCAAAC
AACTCGTTTCTCCGTGGCCTTGGATTGGCAATGTCATCAAGTACTTCTACGCCGGAGGAG
AATTTACTAGCAAGGAGGACTAATTCTCTCGGCCATGTGAAGCTGGAGAGCAATATTAAT
GCAGAGGTACCCGGGCTCGGGATACAGCTTCATGGTCATTCAGGATTTACCGACTTTAGG
ATGGGTCCATCCATATCTCATCAGACATCTATGATGTTCGGAAGCAAGCCTCCGACTCTT
GATTTTCTTGGTTTAGGAAATGGTGCAAGTGTAACTCCATCGAACGGATTTTCAGCATTT
TTAAGCTCAATGGAAGATGGATTTGGTGTTGTAGCTGAGCCTTGGGATGACCCTTCTGAT
AGAAAACCTGCTATGCTCTAG