Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013169
CDS Infomation

pacid=37472488 polypeptide=PGSC0003DMP400009130 locus=PGSC0003DMG400005144 ID=PGSC0003DMT400013169.v4.03 annot-version=v4.03
Sequence

ATGGCAAGCTTACACAAAGGCAAGATTTTCTTATTTTCTTTGCTTTTGTTATTTCATGTT
TCATGGGTTTTTAGAGCTTTTGCTGAAGTTGTAATTGAAGAAGAGAAGTTGGAGAATCTT
GGGGTTGAAGAGAAATTTGAACATGTTGATGCTTTAGATTTGTTAAAAAGACACCAACTT
CAAATAGAAAAACTAGAAGGGATTGTTGAAAATCTTAGCTTGCTTGTTTCTAGGTTAGAA
TCAAGATTACTGGAATACCCTAAACTTCAAAACTTGGAAGGTAAAGAGCAGGTTGTTTTG
GGTGAAAAAAAGAAGATTCAAAGTGAGGGGTTTGTGGGTAGTGAGGGTAGTTTAGAGAAT
AAAGTGTCTGTTACAAAGTATAGTCCTCTTTGGTTGGAGAGGTTTCAGTTTATATCTGCA
GTGAGATTAGGATCAGATGCAACTAGCATCAATGTGTTACCATTTAGAGATGCTGAAGGA
CTGAGTAAGTATGTTGCCATTGGCGATGATCGCGGAAAGGTGTATGCATTCTCTAGAAAT
GGAGAAGTTTTGGTTGAATTTCAAACGTCGATGAGTTCACCAATAACAGCCTATGTGTCG
TACTTGTCTGTTTATAAGAATGAGAGTGTGGTTGTTACGGGGCATGAGAATGGTGGGATT
TTGATGCATAGAATTTGGGAGGTAGTAGTGCCTGATGGTGATGACAGGGCTGCTCTTCGC
ATGGAAACTGTAGGAAAATTTGCTTCACCAGAAATCGAGGAAGGGGGGTCTTCGATTTTA
AGTTTAGAGGTGCATCATGTTGGAAGAAATAGGTATATCTTGTCCACGGATTCTGGTGGG
AAACTAAGGGTTTTTAGGGAGAATGGAACAGTTTATGGGGTGACAACGCCAAAGAGCAGG
CCACTTGCGTTCTTGAAACAAAGGCTTCTATTTCTAACTGAGACTGGTGCAGGGTCATTA
GACTTGAGGACCATGAAGATTAGGGAATCTGAATGTGAAGGTTTAAACAATTCTATTGCT
AAGAGTTATGTATTTGATGCAACTGAACGGTCGAAAGCATACGGGTTTACATCTGATGGT
GATTTGATTCATGTGCTACTCTTAGGTGATAATATGAACTTCAAGTGCAGGGTTAGATCC
AAAAGGAAGTTAGAGATGGCTGAGCCTCTATCATTTCAGGCAATTAAAGGATATTTGCTT
GTTGCTAACCAGGAGAAGGTATCACTGTATAACGTGTCATCGCTGCATTACGTGCGGTCT
GGTGGACCAAGGCTTTTGTTCTCTGTTGGTCATGATGAGATTGTAGCATCATTTTTGAGC
TCTCAATCTTTGGAACTAAATGATAAAAGTAGAAACATTATTCCTTTAGTTGCCAGTGAT
CAAGAAAAGCTGGTTATTCTTGGACTGGGAAGTGGTTACTTGGGGATATATCGCTCAAAC
CTTCCAGTTTTCAAAAATGAGTTCAACACTATGCTGTGGACGAGTCCTGTTTTATTTTTC
ATCATTTTTCTTTTAGGTGCATATTATTTTTTTGCCAAGAAAAAGGAAGCTCTTACCTCC
TGGGGACCTGACGATCCTTTCCCTTCTACGGGTGTTACAAGTGGGGCTCCAATGGGATCC
AGCCAGGGTGACAGATCTTATCCTGATTCATCGAGGAATGCAGATCTTATGGATCTTAGG
GGTAGCAGCCTCAGAGGTCCATCTGGAAGGTATGTCTCTCCATCTCGCTATTCTGGTGGA
ACGGCAGGTGCCTATAGAACGAATTCTGCTGATACAAATTCTAGGCCTGCCTCTGTTGAT
CCCAACTTTAGAACTACCTCGGAGTTAAAATTTAGGGGGACAAATCTAGAAACACCAGGT
TTTCCAAAAAGGAGAGATAGCCTGTTTGTAAACAGTCAAATTGTGGATGATGGCAAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400009130
PEP Infomation

pacid=37472488 transcript=PGSC0003DMT400013169 locus=PGSC0003DMG400005144 ID=PGSC0003DMT400013169.v4.03 annot-version=v4.03
Sequence

MASLHKGKIFLFSLLLLFHVSWVFRAFAEVVIEEEKLENLGVEEKFEHVDALDLLKRHQL
QIEKLEGIVENLSLLVSRLESRLLEYPKLQNLEGKEQVVLGEKKKIQSEGFVGSEGSLEN
KVSVTKYSPLWLERFQFISAVRLGSDATSINVLPFRDAEGLSKYVAIGDDRGKVYAFSRN
GEVLVEFQTSMSSPITAYVSYLSVYKNESVVVTGHENGGILMHRIWEVVVPDGDDRAALR
METVGKFASPEIEEGGSSILSLEVHHVGRNRYILSTDSGGKLRVFRENGTVYGVTTPKSR
PLAFLKQRLLFLTETGAGSLDLRTMKIRESECEGLNNSIAKSYVFDATERSKAYGFTSDG
DLIHVLLLGDNMNFKCRVRSKRKLEMAEPLSFQAIKGYLLVANQEKVSLYNVSSLHYVRS
GGPRLLFSVGHDEIVASFLSSQSLELNDKSRNIIPLVASDQEKLVILGLGSGYLGIYRSN
LPVFKNEFNTMLWTSPVLFFIIFLLGAYYFFAKKKEALTSWGPDDPFPSTGVTSGAPMGS
SQGDRSYPDSSRNADLMDLRGSSLRGPSGRYVSPSRYSGGTAGAYRTNSADTNSRPASVD
PNFRTTSELKFRGTNLETPGFPKRRDSLFVNSQIVDDGK*

Transcript Sequence

Transcript ID

PGSC0003DMT400013169
Transcript Infomation

pacid=37472488 locus=PGSC0003DMG400005144 ID=PGSC0003DMT400013169.v4.03 annot-version=v4.03
Sequence

ATGGCAAGCTTACACAAAGGCAAGATTTTCTTATTTTCTTTGCTTTTGTTATTTCATGTT
TCATGGGTTTTTAGAGCTTTTGCTGAAGTTGTAATTGAAGAAGAGAAGTTGGAGAATCTT
GGGGTTGAAGAGAAATTTGAACATGTTGATGCTTTAGATTTGTTAAAAAGACACCAACTT
CAAATAGAAAAACTAGAAGGGATTGTTGAAAATCTTAGCTTGCTTGTTTCTAGGTTAGAA
TCAAGATTACTGGAATACCCTAAACTTCAAAACTTGGAAGGTAAAGAGCAGGTTGTTTTG
GGTGAAAAAAAGAAGATTCAAAGTGAGGGGTTTGTGGGTAGTGAGGGTAGTTTAGAGAAT
AAAGTGTCTGTTACAAAGTATAGTCCTCTTTGGTTGGAGAGGTTTCAGTTTATATCTGCA
GTGAGATTAGGATCAGATGCAACTAGCATCAATGTGTTACCATTTAGAGATGCTGAAGGA
CTGAGTAAGTATGTTGCCATTGGCGATGATCGCGGAAAGGTGTATGCATTCTCTAGAAAT
GGAGAAGTTTTGGTTGAATTTCAAACGTCGATGAGTTCACCAATAACAGCCTATGTGTCG
TACTTGTCTGTTTATAAGAATGAGAGTGTGGTTGTTACGGGGCATGAGAATGGTGGGATT
TTGATGCATAGAATTTGGGAGGTAGTAGTGCCTGATGGTGATGACAGGGCTGCTCTTCGC
ATGGAAACTGTAGGAAAATTTGCTTCACCAGAAATCGAGGAAGGGGGGTCTTCGATTTTA
AGTTTAGAGGTGCATCATGTTGGAAGAAATAGGTATATCTTGTCCACGGATTCTGGTGGG
AAACTAAGGGTTTTTAGGGAGAATGGAACAGTTTATGGGGTGACAACGCCAAAGAGCAGG
CCACTTGCGTTCTTGAAACAAAGGCTTCTATTTCTAACTGAGACTGGTGCAGGGTCATTA
GACTTGAGGACCATGAAGATTAGGGAATCTGAATGTGAAGGTTTAAACAATTCTATTGCT
AAGAGTTATGTATTTGATGCAACTGAACGGTCGAAAGCATACGGGTTTACATCTGATGGT
GATTTGATTCATGTGCTACTCTTAGGTGATAATATGAACTTCAAGTGCAGGGTTAGATCC
AAAAGGAAGTTAGAGATGGCTGAGCCTCTATCATTTCAGGCAATTAAAGGATATTTGCTT
GTTGCTAACCAGGAGAAGGTATCACTGTATAACGTGTCATCGCTGCATTACGTGCGGTCT
GGTGGACCAAGGCTTTTGTTCTCTGTTGGTCATGATGAGATTGTAGCATCATTTTTGAGC
TCTCAATCTTTGGAACTAAATGATAAAAGTAGAAACATTATTCCTTTAGTTGCCAGTGAT
CAAGAAAAGCTGGTTATTCTTGGACTGGGAAGTGGTTACTTGGGGATATATCGCTCAAAC
CTTCCAGTTTTCAAAAATGAGTTCAACACTATGCTGTGGACGAGTCCTGTTTTATTTTTC
ATCATTTTTCTTTTAGGTGCATATTATTTTTTTGCCAAGAAAAAGGAAGCTCTTACCTCC
TGGGGACCTGACGATCCTTTCCCTTCTACGGGTGTTACAAGTGGGGCTCCAATGGGATCC
AGCCAGGGTGACAGATCTTATCCTGATTCATCGAGGAATGCAGATCTTATGGATCTTAGG
GGTAGCAGCCTCAGAGGTCCATCTGGAAGGTATGTCTCTCCATCTCGCTATTCTGGTGGA
ACGGCAGGTGCCTATAGAACGAATTCTGCTGATACAAATTCTAGGCCTGCCTCTGTTGAT
CCCAACTTTAGAACTACCTCGGAGTTAAAATTTAGGGGGACAAATCTAGAAACACCAGGT
TTTCCAAAAAGGAGAGATAGCCTGTTTGTAAACAGTCAAATTGTGGATGATGGCAAGTAA